KEGG   Oryzias melastigma (Indian medaka): 112162896
Entry
112162896         CDS       T07439                                 
Name
(RefSeq) BRCA1-associated protein
  KO
K10632  BRCA1-associated protein [EC:2.3.2.27]
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112162896
Enzymes [BR:oml01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112162896
Ubiquitin system [BR:oml04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112162896
SSDB
Motif
Pfam: BRAP2 zf-UBP zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-RING_5 zf-RING_11 zf-RING_UBOX zf-C3HC4 RRM_1 zf_RING_Vps8_fungal zf-C3HC4_3 zf-ANAPC11 FUSC KASH_CCD DUF3287 UPF0242
Other DBs
NCBI-GeneID: 112162896
NCBI-ProteinID: XP_024154632
Ensembl: ENSOMEG00000023384
UniProt: A0A3B3E141
LinkDB
Position
LG12:1155385..1172702
AA seq 596 aa
MSVSLVVVRLEIADQSPPPRGFQYCAVEGMSEEQLQEKALGLAKLSLNGKSELERAAVLH
QHIGSRAMGDMVIETFEAGQGSDVEPHSSPQDAHAEPEGPRGAELSPVDSAVKETAPDSP
SKQLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLTEDVRRSAMVCILTVPATMTSHDLM
KLMAPFNEVMEHMKIIRDSTPNQYMVLIKFCSQADADSFYATCNGRQFNSIEEAVCQVVY
VERAEVIKSQEGASLPVMELTELPKCTVCLERMDESVNGVLTTLCNHSFHSQCLQRWEDA
SCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAM
QLTNHRVWDYAGDNYVHRLVASKTDGKMVQFECEGDTCQDEKIDALQLEYSYLLTSQLES
QRIYWENKIVHLEKETAEEINNMKAKFKETLERCDNLEQRLGEISKERQSLEKKSTQLNG
RVLKLSQELKEEQEMNRCLRANQAQLQAQLAEEERKAKESGERKDTVIAELQEQLRDVMF
YLETQQKIEQLSSEARSEIQDGHIDIPAGPADGGVGSADAGPSSGRGRRGRGRKRK
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgagtgtgtcgctggtcgtcgtccgtctggagatcgccgaccagtctcctcctccacga
ggcttccagtattgcgccgttgaagggatgtccgaggagcagctgcaggagaaagctctg
ggtttagccaaactcagcctgaatgggaagtcggagctggagagagccgcagtcctgcac
cagcacatcggcagcagagccatgggggacatggtcatcgagaccttcgaggccggccaa
ggaagtgatgtcgagccgcacagctcgcctcaggacgcccacgcggaaccggagggtccg
aggggagcagaactgtcgccggtggacagcgccgtcaaagaaacggcgccggactcgccc
tccaagcagctcccagaccagatctccttcttcagcggaaacccgtcggtggagatcgtc
cacgggatcatgcacctctacaaaaccaacaaaatgacgtctctgaccgaagacgtacgc
cgcagcgccatggtctgcatcctgaccgtcccggcgaccatgaccagccacgacctcatg
aagctcatggcgccgttcaacgaggtcatggagcacatgaagatcatccgtgactccaca
cccaaccagtacatggttctgatcaagttctgctcccaggcagacgccgacagcttctac
gccacctgcaacgggcgccagttcaactccatcgaggaggcggtctgccaggtggtctac
gtggagcgagccgaggtcatcaagtctcaggagggagccagcctgccggtgatggagctc
accgagctgcccaagtgcaccgtgtgcctggagaggatggacgagtcggtgaacggcgtc
ctcaccacgctgtgcaaccacagcttccacagccagtgcctgcagcgttgggaagacgcc
tcgtgtcccgtgtgccgctactgtcagacgccggagccggtggaggagaacaagtgcttc
gagtgcggcgttcaggagaacctgtggatctgcctgatctgcggccacatcggctgcggt
cgctacgtcagccggcacgcctacaagcactttgaagagacgcagcacacgtacgccatg
cagctgaccaaccatcgcgtgtgggactacgccggagataactacgttcatcggctggtg
gccagtaagactgacgggaagatggtgcagttcgagtgtgaaggagacacctgccaggac
gagaagatcgatgcgctgcagctggagtactcgtacctgctgaccagccagctggagtcc
cagaggatctactgggagaacaagatcgtccacctggagaaggagacggctgaggagatc
aacaacatgaaggccaaattcaaggagacgctggagcgctgcgacaacctggagcagaga
cttggagagatctccaaggagaggcagagtctggagaagaagtccacgcagctgaacgga
cgtgtgctgaagctcagccaggagctgaaggaggagcaggagatgaaccgctgcctgaga
gccaaccaggcgcagctgcaggcccagctggccgaggaggagcgcaaagccaaggagagc
ggcgagcgtaaagacacggtcatcgcagagctgcaggagcagctccgagacgtcatgttt
tacctggagacgcagcagaagatcgagcagctgtcctccgaggctcgctccgagatccag
gacggacacatcgacatcccagccggccccgcggacggcggcgtgggctcggcggacgcg
ggcccctcctccggccggggccgccggggccggggccgcaagaggaagtag

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