Oryzias melastigma (Indian medaka): 112162896
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Entry
112162896 CDS
T07439
Name
(RefSeq) BRCA1-associated protein
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112162896
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112162896
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112162896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_11
zf-RING_UBOX
zf-C3HC4
RRM_1
zf_RING_Vps8_fungal
zf-C3HC4_3
zf-ANAPC11
FUSC
KASH_CCD
DUF3287
UPF0242
Motif
Other DBs
NCBI-GeneID:
112162896
NCBI-ProteinID:
XP_024154632
Ensembl:
ENSOMEG00000023384
UniProt:
A0A3B3E141
LinkDB
All DBs
Position
LG12:1155385..1172702
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AA seq
596 aa
AA seq
DB search
MSVSLVVVRLEIADQSPPPRGFQYCAVEGMSEEQLQEKALGLAKLSLNGKSELERAAVLH
QHIGSRAMGDMVIETFEAGQGSDVEPHSSPQDAHAEPEGPRGAELSPVDSAVKETAPDSP
SKQLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLTEDVRRSAMVCILTVPATMTSHDLM
KLMAPFNEVMEHMKIIRDSTPNQYMVLIKFCSQADADSFYATCNGRQFNSIEEAVCQVVY
VERAEVIKSQEGASLPVMELTELPKCTVCLERMDESVNGVLTTLCNHSFHSQCLQRWEDA
SCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAM
QLTNHRVWDYAGDNYVHRLVASKTDGKMVQFECEGDTCQDEKIDALQLEYSYLLTSQLES
QRIYWENKIVHLEKETAEEINNMKAKFKETLERCDNLEQRLGEISKERQSLEKKSTQLNG
RVLKLSQELKEEQEMNRCLRANQAQLQAQLAEEERKAKESGERKDTVIAELQEQLRDVMF
YLETQQKIEQLSSEARSEIQDGHIDIPAGPADGGVGSADAGPSSGRGRRGRGRKRK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgtcgctggtcgtcgtccgtctggagatcgccgaccagtctcctcctccacga
ggcttccagtattgcgccgttgaagggatgtccgaggagcagctgcaggagaaagctctg
ggtttagccaaactcagcctgaatgggaagtcggagctggagagagccgcagtcctgcac
cagcacatcggcagcagagccatgggggacatggtcatcgagaccttcgaggccggccaa
ggaagtgatgtcgagccgcacagctcgcctcaggacgcccacgcggaaccggagggtccg
aggggagcagaactgtcgccggtggacagcgccgtcaaagaaacggcgccggactcgccc
tccaagcagctcccagaccagatctccttcttcagcggaaacccgtcggtggagatcgtc
cacgggatcatgcacctctacaaaaccaacaaaatgacgtctctgaccgaagacgtacgc
cgcagcgccatggtctgcatcctgaccgtcccggcgaccatgaccagccacgacctcatg
aagctcatggcgccgttcaacgaggtcatggagcacatgaagatcatccgtgactccaca
cccaaccagtacatggttctgatcaagttctgctcccaggcagacgccgacagcttctac
gccacctgcaacgggcgccagttcaactccatcgaggaggcggtctgccaggtggtctac
gtggagcgagccgaggtcatcaagtctcaggagggagccagcctgccggtgatggagctc
accgagctgcccaagtgcaccgtgtgcctggagaggatggacgagtcggtgaacggcgtc
ctcaccacgctgtgcaaccacagcttccacagccagtgcctgcagcgttgggaagacgcc
tcgtgtcccgtgtgccgctactgtcagacgccggagccggtggaggagaacaagtgcttc
gagtgcggcgttcaggagaacctgtggatctgcctgatctgcggccacatcggctgcggt
cgctacgtcagccggcacgcctacaagcactttgaagagacgcagcacacgtacgccatg
cagctgaccaaccatcgcgtgtgggactacgccggagataactacgttcatcggctggtg
gccagtaagactgacgggaagatggtgcagttcgagtgtgaaggagacacctgccaggac
gagaagatcgatgcgctgcagctggagtactcgtacctgctgaccagccagctggagtcc
cagaggatctactgggagaacaagatcgtccacctggagaaggagacggctgaggagatc
aacaacatgaaggccaaattcaaggagacgctggagcgctgcgacaacctggagcagaga
cttggagagatctccaaggagaggcagagtctggagaagaagtccacgcagctgaacgga
cgtgtgctgaagctcagccaggagctgaaggaggagcaggagatgaaccgctgcctgaga
gccaaccaggcgcagctgcaggcccagctggccgaggaggagcgcaaagccaaggagagc
ggcgagcgtaaagacacggtcatcgcagagctgcaggagcagctccgagacgtcatgttt
tacctggagacgcagcagaagatcgagcagctgtcctccgaggctcgctccgagatccag
gacggacacatcgacatcccagccggccccgcggacggcggcgtgggctcggcggacgcg
ggcccctcctccggccggggccgccggggccggggccgcaagaggaagtag
DBGET
integrated database retrieval system