Oryzias melastigma (Indian medaka): 112162899
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Entry
112162899 CDS
T07439
Symbol
erbin
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112162899 (erbin)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
PDZ
LRR_LRWD1
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
112162899
NCBI-ProteinID:
XP_024154641
Ensembl:
ENSOMEG00000015726
UniProt:
A0A3B3CA24
LinkDB
All DBs
Position
LG12:complement(4273552..4335825)
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AA seq
1357 aa
AA seq
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MSKRSFFVRLVPCRCLRGEEEVVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEEL
PKQLFNCQLLNRLSVPDNDLAVLPAAIANLVNLRELDVSKNGIQEFPESIKNCKGLTIVE
ASVNHMPKLPEGFTLLLNLTQLYLNDGYLEFLPASFGRLAKLQILELRENQLQNLPKSMQ
KLTQLERLDLGSNEFTEVPEVLEHLSGIKELWMDGNKLTVLPAMVGKLKNLEYLDMSKNH
LEMVDEQISGCENLQDLLLSNNALTQLPASIGSLKKLTALKVDENQLMYLPDSVGGLTAI
DELDCSFNEIEALPSSIGQWVSIRTFAADHNFLTQLPPEMGNWKNLTVLFLHSNKLESLP
EEMGDMQKLKVINLSNNKLKNLPYSFTKLSEMTAMWLSENQSKPLIPLQKDEDPQTHKVT
LTNYMFPQQTRTDEYIPHSDSESFNPALWEEQRKQRAQVAFECDEDKDEREAPPREGNLK
RYPTPYPDELKNMVKTAQSVAHRLSESGEGSGKESKPAERNHIGIQDVGVKVIEAPCPNG
VPADAHPPVSTDSEAQNPSTEDSKDTSESVSSQKAQMKSSEASTMNHEDTLEYPEELTDD
EVDMRIAEMRPPLIEISINQPKVVSLSKDRKDDGKDADSLLDDTVANSNQNNSNCSSPSR
MSDSVSLTTDSSQDNSLCTPEREARMPFLPRSRDEDENMNQPRDTTPLLHNGNGSETSLP
SLLRTQPTPPDYDLCMENRLAILGKGIHSGVGETYTKWDQINMNVTKLPSYDADHLDGSE
KAKNGPVPQGDLNGQQYFQNGNRSGSEAVGGQRAEPSPMHAAPLAVGSDMSLSRSTEELS
PEKRSYLPQVMKSHSISNIEAGGMKLFSFEGDEDGGVMSRMVGVGPGPGAPAQSIVRSKS
ASQLLNDQPLHVYNSSSSSDLLSSSMTPPTRYPVSSSVGAPPPQYNVQYTSSAMPKDSLW
GQRSAVPPEQQGYFPHPPHSLANTNFSNRNQAPPYPLQPQQKGPPMAKERLYSTGGQVRS
STLQRQSSGASAVSIGELRRLQPADGEYMTYRDIHALPRGPLAMVAHRPFSARTYSIDGP
GASRPVSARPPPHELPERTMSVSDFNYQHISPSKRPNARVKSEHSLLDAPGPGRVPADWR
DQVMRHIEAKKIEKNALSRSCNSNNFPLSWSHDGRDMHASQGSLVFSGRDGPPHLSFCDD
VFPLQGGQSYTMDHRKVPLMNGQMGPSARPQTSMGRHPSREQLIDYLMLKVSQPPAPPRY
PPDTRPQEIRVKVEKNPELGFSISGGVGGRGNPFRPDDNGIFVTRVQPEGPASKVLQPGD
KILQANGYNFVNIDHANAVSLLKTFATTVDLLIVREA
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggagctttttcgttcggctggtgccgtgccgctgcctgcgcggtgaggag
gaggtggtgacatcgctggactactcccattgtagcctggagactgttcctaaggagatc
ttcagctttgagaagaccctgcaggaactgtacctcgatgccaatcagatcgaggaactc
cctaaacaactgttcaactgccagttactcaaccgactgagcgtgccagataatgacctt
gcagtgttgccggcagccatcgccaacctcgtcaatctcagggagctcgatgtcagcaaa
aacggtatccaagagtttccagagagcatcaagaactgcaaaggcctgacaatagttgag
gccagtgtgaaccacatgccaaagctcccagaaggcttcacgctgcttctgaacctgaca
cagctctacctgaacgacgggtacctggagttcctaccagccagcttcggcaggttggcc
aagctgcagatcctggagctgagggagaaccagctgcagaatctgccaaagagcatgcag
aagctcacgcagctggagaggctggacctggggagtaatgagttcactgaagtgcctgag
gtattggagcacctgtctggaatcaaggagctgtggatggacgggaacaagctgacggtt
ttacctgcgatggtggggaagctaaaaaacctggaatatctggacatgtcgaagaaccac
ctggaaatggtggacgaacaaatcagcggctgtgagaacctgcaggacctcctcctctcc
aataacgccctgacgcagctgcccgcctccatcggctccctgaagaaactgacggcgctg
aaagtggatgaaaaccagctgatgtatttgccagactccgttggagggctgacagctata
gacgagctggactgcagttttaacgaaatcgaagccttgccctcctccatcggccagtgg
gtttccatccgaaccttcgccgccgatcacaatttcctgactcagcttcctcctgagatg
ggcaactggaagaacttaaccgtgctgttcctgcactccaacaagctggagtctttgccg
gaggagatgggcgacatgcagaagctcaaagtcatcaatctgagcaacaacaagttaaag
aatcttccgtacagtttcaccaaactcagcgagatgactgcaatgtggctgtctgaaaac
cagtccaagcccctcatccctctgcagaaagacgaggatcctcagacccacaaagtaacc
ctcaccaactacatgttcccgcagcagaccaggacagacgaatacatcccccactctgat
tcagagagcttcaacccggcgctctgggaggagcaacgcaagcagcgagctcaggtggcc
ttcgagtgcgacgaggacaaggatgagagagaagcccccccgagggagggaaacctgaaa
cggtatccaacgccatacccagacgaactgaagaacatggtgaagacggcccagtctgtg
gctcacaggctgagcgagtccggcgaggggtcgggcaaagaatccaaaccagccgagcgg
aaccacattggaatccaggatgtgggtgtgaaggtcatcgaggccccctgtcccaacggc
gtgccagcagacgcccaccccccagtatcaaccgactctgaggcccagaatccttctacg
gaggactcgaaagacacttctgagtctgtcagttcccagaaagctcagatgaaatcatca
gaggcctccacgatgaaccacgaggacaccctggagtatcccgaggagctgacggatgac
gaggtggacatgagaatcgcagagatgaggccgcctctcatcgagatttccatcaaccag
cccaaagtggtgtctctgagtaaagatagaaaagatgatgggaaagatgccgactctttg
ctggatgacaccgtggccaacagcaaccagaacaacagcaactgttcgtcgccgtcgcgc
atgtccgactccgtctctctgaccacggacagcagtcaggacaactctctgtgcacgccc
gagagggaggccaggatgcctttcctgcctagaagccgggacgaggatgagaacatgaac
cagcccagagacaccaccccgctcctccacaacggcaacggctcggagacgtccctgccc
tccctcctcagaacccagccgacgccgccggactacgacctgtgcatggagaacaggctg
gccattcttgggaaggggatccacagcggcgtgggagagacctacaccaagtgggaccag
atcaacatgaacgtgaccaagctgccgagctacgacgccgaccacctggacggctcggag
aaggccaagaacggtccggtgccccagggcgacctgaacggccagcagtacttccagaac
gggaatcggagtggaagtgaggccgtgggggggcagagggcggagccctcgccgatgcac
gccgcccctctggccgtgggcagcgacatgtctctgtctcgcagcacggaggagctgtct
ccagagaaacggtcctacctgccgcaggtgatgaagtcgcacagcatcagcaacatagaa
gcaggaggcatgaagctgttctcctttgagggagacgaagacggcggcgtgatgagcagg
atggtgggggtgggcccgggaccgggggctccggcccagagcatcgtgaggagcaaatcc
gccagccagctcctcaacgaccagcctctccacgtctacaacagctcctcctcctcagac
ctgctgtcctcctccatgactcctcccaccaggtatcccgtctcctccagcgttggagcc
ccgccccctcagtacaacgtccagtacacgagcagtgccatgccgaaggacagcctgtgg
ggtcagaggtcagcggttcctccagagcagcagggctacttcccccaccctcctcactcg
ctcgccaacaccaacttctccaaccgaaaccaggcgcccccgtaccccctgcagccgcag
cagaaggggccccccatggccaaggagagactttactccactggcggccaggtgaggagc
agcaccctgcagaggcagagcagcggcgcctccgccgtctccatcggcgagctgaggcgc
ctgcagccagccgacggggagtacatgacgtacagggacatccacgcgctccccaggggc
ccgctcgccatggtggcgcacaggcccttctcggctcgcacctacagcatcgacggcccc
ggagcgtcccggcccgtcagcgccaggccgcccccgcacgagcttccagagcggaccatg
tctgtgagcgacttcaactaccagcacatcagccccagcaagcggcccaacgccagggtc
aagtccgagcactcgctgctggacgcgccgggcccggggagggtccccgcagactggaga
gaccaggtgatgcggcacatcgaggccaagaagatcgaaaagaatgctctgtctcgctcc
tgtaactccaataacttcccgctgagctggtctcacgacggtagagacatgcatgccagc
caaggctccctggtgtttagtggcagggacggaccgccccacctgagcttctgtgatgat
gtttttcctctccagggtggacaaagctacaccatggaccacagaaaagtgcctttgatg
aacggccagatgggcccgtcggctcgacctcaaacatctatgggccgtcacccgtcccga
gagcagctcatcgactacctgatgctgaaagtctctcagcccccggcgcccccccgttac
ccccctgacacgaggccgcaggagatccgtgtgaaagtggagaagaatccggagctgggt
ttcagtatttcaggtggagtaggaggccggggaaaccccttccgccctgatgataatggc
atatttgtgacaagggttcaacctgagggcccagcttcaaaagtccttcagccgggagac
aaaatccttcaggctaacggatacaactttgtgaatatcgatcacgccaacgccgtctcc
ctcctgaaaacatttgcaaccactgtggatttattgatcgtacgggaagcatag
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