Oryzias melastigma (Indian medaka): 112162909
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Entry
112162909 CDS
T07439
Symbol
ubqln4
Name
(RefSeq) ubiquilin-4
KO
K04523
ubiquilin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112162909 (ubqln4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112162909 (ubqln4)
03051 Proteasome [BR:
oml03051
]
112162909 (ubqln4)
Membrane trafficking [BR:
oml04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112162909 (ubqln4)
Proteasome [BR:
oml03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112162909 (ubqln4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Ubiquitin_5
UBA_7
YukD
CUE
Dsc3_N
Rad60-SLD_2
UBA_HOIP
UBA_NBR1_C
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
112162909
NCBI-ProteinID:
XP_024154680
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All DBs
Position
LG11:complement(16670650..16678773)
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AA seq
584 aa
AA seq
DB search
MADQGAADPGNNNNNNKPEASEGTIIKVTVKTPKDKEEIAIAEDASVTQFKEEISKRFKA
KQDQLVLIFAGKILKDGDSLSQHGIKDGLTVHLVIKTAHKAADGGSTSASSSASTQAGSS
SSSGPSANPTSTAGSTSSAAPTAQPPNVLSGFGDLASLAGLGMGSANFMELQQQMQRQLM
SNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTME
LARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGSNPFSALG
GTSESGAQPSRTENREPLPNPWGPPNASSSSESGGATTGSTGTTGGTTPSVSNPLGINAS
SLGNGMFNSPGMQSLLQQISENPQLMQNMLSAPYMRSMMQSLSQNPELASQVLMNNPLFA
GNPQLQEQFRAQLPVFLQQMQNPEALSVMTNPRAMQALMQIQQGLQTLQTEAPGLMPSLM
TSGIPGVPTGGSVLAENPASSPSSAGTNASQQQQQLMQQMLQMFAGGAGGGSGTTQTPEV
RFQTQLEQLSAMGFINREANLQALIATGGDINAAIERLLGSQPS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaaggcgccgcagatcctggtaataacaacaacaacaataaacctgaagcc
tcggagggaactattattaaggtcacagtgaaaactcctaaagacaaagaggaaatcgcc
atcgcagaagatgcttctgtcactcagtttaaagaagagatctcaaagcggtttaaagcc
aaacaggatcagttggttctcatttttgccggcaagatattgaaggacggggacagcctg
agtcagcacggcatcaaagacggcctgacggttcacctagtcataaagacggcacacaag
gcagccgatggcggtagtacctccgcctccagctcggcctccactcaggcgggaagtagc
tcctcttctggtcccagcgccaaccccacgtccacagcaggctccaccagctctgcagca
ccaaccgcacagcctcccaacgtactgagtggcttcggggacctggccagcctagccgga
ctgggcatgggctcggccaacttcatggagctgcagcagcagatgcagcggcagctcatg
tccaacccagaaatgctctctcagatcatggagaacccgctggtgcagaacatgatgtcc
aaccccgacctgatgagacagatgatcatggccaaccctcagatgcagcagctgatggag
cgcaacccagagatttcccacatgctcaacaacccagagctaatgcgacagacaatggag
ctggctagaaaccccgccatgatgcaggaaatgatgcgaaaccaggaccgtgctttgagt
aacttggaaagcatcccaggaggttataatgccttgcggaggatgtatacagacatccaa
gaacccatgtttagtgctgcaagagaacagtttggtagcaacccgttttcagctctaggc
ggtacctcagagtctggcgctcagccatcgaggacggagaaccgagagcccctccccaat
ccatggggacccccaaatgcttcgagctcctctgagagtggaggggccaccacagggagc
accggcaccacggggggaaccaccccaagtgtgtccaatcctctgggcatcaatgctagc
agtctgggaaacggcatgttcaacagccccggcatgcagagtctattgcagcagatctca
gaaaacccccagctgatgcagaacatgctgtctgctccgtatatgcgcagcatgatgcag
tcgctgtcccaaaacccagagctagcatcccaggttttgatgaataatcctctgttcgct
ggaaacccacaactgcaggagcagttccgagctcagctgcccgtcttcctgcagcagatg
cagaacccagaggcgctctctgtcatgaccaacccccgggcgatgcaggcgctcatgcag
atccaacagggtctgcagacgctgcagacggaagctcccggcctcatgcccagtttgatg
acaagcgggattcctggcgttcccacaggaggaagcgtgctcgccgagaaccccgcctcc
tcacccagcagtgctggaacgaacgccagtcagcagcagcagcagctgatgcaacagatg
ctccagatgtttgccggtggagccggaggaggaagtggaacgactcagaccccagaagtc
cggttccagacccagctagagcagctgagcgccatgggcttcatcaaccgcgaagccaac
ctgcaggccctcatcgccaccggaggagacatcaacgccgctatcgagagactgctgggc
tcacagccctcgtaa
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