Oryzias melastigma (Indian medaka): 112162911
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Entry
112162911 CDS
T07439
Symbol
abraxas1
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1 isoform X1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112162911 (abraxas1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oml03400
]
112162911 (abraxas1)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
112162911 (abraxas1)
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Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
CENP-Q
DUF6779
Mis12
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
112162911
NCBI-ProteinID:
XP_024154679
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Position
LG12:293348..296376
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AA seq
376 aa
AA seq
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MSEPAVRVSGIVLASLMFQHANSDSDVEGLVLGESRFEEQVTISDSQSDRVHIQETYNVQ
KHVACRRLDTLYSGSGEVNMEVLQEMLADGGPAGHDGGRLAPPQVSSDPAPAGHDGGRLA
PPQDGVIGWYRQRRNSEQQMSFREKVVHENLRRALANPHMIFMLLTPSRAVLTGSTHRTE
YAAFICRDRRFVNIPVLVNNLGLLEQQGYWRGAAPCSATGYIITMKKHRSKFFCSSGLLR
EVSEVNSMNESLQAELQKACGCVEESERQLEALQTEVSALRRRLEEKQPPEPVDAVQAEP
RNNGALLSAVRALLGCSPMFLTQTLTLQAFPVPEEDASPETQVKEEQPPLPQLSDMTSRK
RPRETAARERKRKRSR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaccggcggttcgggtctcagggatcgttctggcttccctcatgttccagcac
gcgaacagcgactcggacgtggagggtctcgtgctcggagagagccgctttgaagagcag
gtgaccatcagcgactctcagtctgaccgcgtgcacatccaggagacctacaacgtgcag
aagcatgtggcctgtcggcggctggacactctgtacagcggctccggggaggtgaacatg
gaggtgctgcaggagatgctggcggatggcgggccggcgggtcatgatgggggtcggctg
gctccgcctcaggtcagttctgacccggctccggcgggtcatgatgggggtcggctggct
ccgcctcaggacggcgtgatcggctggtatcgacagcgcaggaactcggagcagcagatg
agcttcagggagaaggtggtccacgagaacctgaggagggcgctggccaacccccacatg
atcttcatgctgctgacgcccagcagggcggttctgaccggatccacacacagaaccgag
tacgctgccttcatctgccgggacaggcgcttcgtgaacatccccgttctcgtcaacaac
ctgggtctcctggagcagcaggggtactggaggggggcggcgccgtgctcagccacaggt
tacatcatcaccatgaagaaacacaggtccaagttcttctgctccagcggcctgctgagg
gaggtgagcgaggtgaacagcatgaacgagtctctgcaggcggagctccagaaagcctgc
ggatgtgtggaggagagcgagcgtcagcttgaggctctgcagaccgaggtctccgctctc
aggaggaggttagaggagaagcagccgccagaaccagtcgatgccgttcaggccgagccg
aggaacaacggcgccctgctcagcgccgtccgggctctgctgggctgctcgcccatgttc
ctcacacagacgctcacgctgcaggcgtttcctgtacccgaggaagacgcctcacctgag
acgcaggtaaaggaggaacagcccccccttccgcagctgagtgacatgacctctcggaag
aggccacgagagacggcggcgagggagaggaagcggaaaaggagcaggtga
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