Oryzias melastigma (Indian medaka): 112162954
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Entry
112162954 CDS
T07439
Symbol
rph3aa
Name
(RefSeq) rabphilin-3A isoform X1
KO
K19938
rabphilin-3A
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112162954 (rph3aa)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112162954 (rph3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Phospholip_A2_2
FYVE_2
zf-piccolo
Motif
Other DBs
NCBI-GeneID:
112162954
NCBI-ProteinID:
XP_024154735
Ensembl:
ENSOMEG00000023483
LinkDB
All DBs
Position
LG12:complement(893891..1093607)
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AA seq
984 aa
AA seq
DB search
MLLLQRAARRLSQSGGEQQLDGCWRRAPSRPSRRTPTDAHLSPRRRRGHTMSSGGSSLGE
ELTDEEKEIINGVLARAAMMEAVEQERIQRLSSRLDSIKKTACGDGQSHCLLCGASFGLQ
AVAAVLCAQCKKHICSKCGIWINSRPAPMWLCKICKEQQEIQKRSGAWFFKGNQQHSLPA
PLPLSRADQSRPDQSRPDQSRPDQSGSETSSDPSGRQTGSEEPRTRRQGPELRAEPSCGS
RRREPTAAPTADGADEPHHAPAAGMKTERQGSAPKPPQANAQQDAPTSGAGVEVRSSQDK
QTPVSSQLPAARGATPGHPPGHPPGHPPGHPPASNATPPKPAAEPAVEENDYDSDDSTTL
GSLEFSLLYEQEGHALHCCIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLKN
TLNPVWNETLVYHGITAEEMARKTLRLSVSDEDKFGHNEFIGETRVALKKLQFNQKKNFN
ICLERVIPVKKAVGGSIRGMALYEDDLKEGEDSEERGRILISLTYNSQQSRLLVGVVRCA
HLAAMDSNGYSDPFVKISLKPDMGKKAKNKTQIKKKTLNPEFNEEFSYEIKHADLAKKTL
DISVWDYDMGKSNDFIGVFSDTDSCCREHDQCQHTILSFQSEFGVFNSNIFTMSHCDCDN
RFHSCLKEANDSISDVVGYTFFNLLKMHCFTFSHRLQCAKRNWFGMCKESQMALYADVHP
PTLYETTPPEDCSNVSCSNISSTVGTEQKTSTSSPQTHLSTTTATSTFPSPPRAFSSITS
PPSPGTSTSKGPAGKPAGSRPGRDDLENALPAKLPAVVQQYANVTERQTDCSIFRELDDC
KMRILPQQAKYGLVNTKAGTLYHCNCTARLFQTLAQQRSLTAVQNLLMSFVSQSCFLFQD
CTSGNTSCPAVELKAELQPDQQGGSEDGQQRHLQAVNLKVRRPKTSRAARKDRRVRLFKL
CVRKTQPRQARKGRRAELKTQQPE
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgctcttactacagcgagcggcgaggaggctgagccagagcggaggagagcagcagctg
gatggatgctggcggcgcgctccatcacgcccaagcaggagaacgccgaccgacgctcac
ctgagcccgcgccgcaggagaggacacacaatgagctcaggtggcagcagcctgggggag
gagcttaccgatgaggagaaggagatcatcaacggcgttctggctcgcgccgccatgatg
gaggccgtggagcaggagcggatccagcgtctgtccagtcgtctggacagcatcaagaag
acggcgtgcggggacggacagtcccactgtctgctctgcggggcgtccttcggtctccag
gcggtcgcagctgtcctctgtgcacagtgtaaaaaacacatttgcagtaaatgtgggatc
tggatcaacagcaggccggctcccatgtggctttgcaagatctgcaaggagcagcaagag
atccagaaacgttcaggagcttggttcttcaaggggaaccagcagcacagtctgcctgcc
cccctccctctgtccagagcggatcagtccagaccggatcagtccagaccggatcagtcc
agaccggatcagtccggctcagaaaccagctccgatccaagcggacgccagaccggatca
gaggaaccgcgaacacgccgtcagggacccgagctccgagccgagccgtcctgcggatcc
cggcgacgggagccgacagcagcaccaacagccgacggcgccgatgagcctcatcacgct
ccggcagctggaatgaagacggagcgccaggggtccgcccccaaacccccccaggcaaac
gcgcagcaggacgcgcccacctcaggtgcaggggtggaggtccgctcgtcccaggacaag
caaacacctgtttcctctcagcttcctgctgccagaggggctacccctggacatccacct
ggacatccacctggacatccacctggacatccacctgccagcaacgcaacgcctccaaaa
cccgcggcagagccggcggtagaggagaatgactacgactctgatgattccaccactctc
gggtctctggagttcagtttgctgtacgagcaggaaggccacgccctccactgctgcatc
atcaaagccaaggggttgaagcccatggactccaatggacttgctgatccgtacgttaaa
ctccacctgttacctggagccagtaagtccaacaagcttcgcaccaaaaccctcaagaac
accttgaaccccgtgtggaacgagactctggtctaccacggcatcaccgctgaggagatg
gcccgaaaaacgctgaggctctccgtgagcgacgaggacaagttcggacacaacgagttc
atcggagaaacccgagtggccctgaagaaactgcagttcaaccagaagaagaacttcaac
atctgcttagagagggtgatcccggtgaagaaggctgtcggaggatccattcgtggcatg
gcgctgtatgaggacgatctgaaagagggcgaggactccgaggagagaggccgcatcctc
atctcactgacctacaacagccagcagagccggctgctggtgggcgtggtccgctgtgct
cacctggcggccatggactccaacggatactcggatccgttcgtcaaaataagtctgaaa
ccagatatggggaaaaaagccaaaaataaaacccaaatcaagaagaagacgctcaacccc
gagttcaacgaggagttcagttatgaaataaaacacgccgatctggccaagaagactctc
gacatctccgtgtgggattacgacatggggaagtccaacgatttcatcggcgttttctcc
gacacggacagctgctgccgggaacatgaccagtgccagcacaccatcctgtcctttcag
tcggagttcggcgtcttcaacagcaacatcttcaccatgtctcactgcgactgcgacaac
aggtttcacagctgcctgaaggaagccaacgacagcatctctgatgtggtgggatacact
ttcttcaacctgctgaagatgcactgcttcaccttctcccaccgactgcagtgtgcaaag
agaaactggtttggaatgtgtaaagagtctcagatggctttgtacgcagacgtccatcca
cccactctgtacgagacgactccgcctgaggactgcagcaacgtctcgtgctccaacatc
agctccactgttggtacagagcagaaaaccagtacatcgtctccacaaacacacctctcc
accaccacagccacctccaccttcccatcaccccccagagctttctcctccatcacttct
ccgcccagccctgggacttccacgagcaaaggcccagctggtaaacccgcagggtccaga
ccggggagggacgacctggagaacgctttaccagccaaactcccggcagtggtccagcag
tatgctaacgtcacagagaggcagacggactgcagcatcttcagggaacttgatgattgt
aagatgagaattctgcctcagcaggcgaagtacggcctcgtcaacaccaaggcggggacg
ctgtaccactgcaactgtacggccagattgttccagacgctggctcaacagaggtcactg
acagcggtgcagaatcttctgatgagcttcgtctcccagtcctgcttcctgtttcaggac
tgcacatcaggaaacaccagctgtccggccgtggagctgaaagctgaacttcagccggat
cagcaggggggctctgaagacgggcagcagcgccacctgcaggccgttaacctgaaggtc
aggaggccaaaaaccagcagagcggcgaggaaagacagacgtgtgaggctcttcaaactg
tgcgtcaggaagacacaacccagacaagcgaggaagggaagaagagcagaactgaagacg
caacaacccgaatga
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