KEGG   Oryzias melastigma (Indian medaka): 112162969
Entry
112162969         CDS       T07439                                 
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
  KO
K06277  Rap guanine nucleotide exchange factor 1
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04510  Focal adhesion
oml04910  Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112162969 (rapgef1b)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    112162969 (rapgef1b)
SSDB
Motif
Pfam: RasGEF RasGEF_N
Other DBs
NCBI-GeneID: 112162969
NCBI-ProteinID: XP_024154766
Ensembl: ENSOMEG00000011461
UniProt: A0A3B3DE44
LinkDB
Position
LG12:7842798..7887480
AA seq 1203 aa
MSRKIESKHDSQRSHLSTITMILKDKFHSPKIKRTPSKKGKQAQPEPAAKSAEKPANKKV
SRLEEHEKEVVSALRYFKAIVDKMMVEKKVLEMLPGSASKVLEAILPLVQVEAWIQHSTA
LTSCHSRVYQSLGNLIRWADQVMLDGIDLEDKENVAAVTGVIKAVLDGVKELVKLTIEKQ
EQPSPTTPNKPAPPVAPAESVSSETHLIDREQEVSKKAAPAASPAESAPELADEDVAPPK
PPLPEAKMAELRAQLSADAGQRRPSQKENPPPALPPKKRQSAPSPTPVAVVAPMTRGSSL
PCNDHRPGYEQEFHQRRFSGGSHSYGGDSPRLSPCSSMGKLSKSDEQLSSMEHDSGQCSR
NTSCETLDNTESYDPDYDFLHQDLSAGDNLPPIPVGGCLSPLPESHSESSSPVPGQHPPH
PRFSAPPPQQSEYWTPQPNHTNPLQSSRISAPPALPLKKRRSTQTSSFSSDGGTRVLYER
YPSQYDNLSEEELHPTPPFPLFTPISPMPQTNGGVFVSQYVASENADVPASPPPLPEKKS
KHILQYMQFVEDYSEPQPSVFYQMPQSESIYEQRNKRFQEVCGFNDSFSSTDSVHESVLP
PALPPKQRQLASHSSSPSSSSSSSLSCHLQPSVAAMEEAGSGLGLSMSVSNSYLNGQASL
ATPTSLDQVALTNATVLDGSGGGPSGSLAGSVGSVAVCLPSESSLTDSLHTSASESANDE
GGEGEYVNLYSSSQANGELPLSLRETIAADDALQDPTPQMASSNSKEALDKERRQKTSEL
AGSDEEDVDELSLIDHKEIMSRITLKQENDDGPDVRAGSGDILLVHATETDRKDLVLYCE
AFLTTYRTFITPEDLIKKLHYRYTTFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTED
ILKQLMDLVFTLVCNGELSLARVLRKNILDKVEQRKLLRYTNSLKPLAARGVSARPGTLH
DFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSLI
IQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEY
CTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDGKVNFSKRWQQFN
ILDSMRRFQQVHYELKRNEDIISFFNDFSDHLAEEALWELSLKIKPRNITRRRTEREEKN
LGL
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgtcgagaaaaattgaaagcaagcacgactctcaacgatcccatctgtccaccatcacc
atgatactgaaggacaagttccactctcccaagatcaaaaggactccttccaagaaggga
aagcaggcgcagcccgagccagcggccaagagtgctgaaaaacctgctaacaagaaagtt
agccggctagaagagcacgagaaggaggtggtcagtgcactgcgctacttcaaggcaatt
gtggacaaaatgatggtggagaagaaggtactggagatgctcccaggctcagccagcaaa
gtgctggaagcaattctacctctggttcaggtagaggcatggatacagcacagcacggcg
ctgacttcctgccacagtcgcgtctaccagagtttgggcaacctcatccgttgggctgac
caggtcatgctggatggtatcgacttggaggacaaggagaatgtggcagctgtgactggt
gtcatcaaggcagtgctggatggagtgaaggagctggtgaagctgaccatagagaaacag
gagcagccatcgcccaccacccctaacaaaccggcaccacctgtcgctccagcggagagt
gtgtcatcggagacgcatctaatagatcgggagcaggaagtgtcaaagaaggccgcccca
gctgcttctcctgcagagtctgcccctgaactagcagatgaggacgtggcccctcccaaa
cccccgcttccagaggccaaaatggctgagcttagagcgcagttgagtgctgacgctggc
caaaggagaccctctcagaaggagaacccgcccccagctcttcctcccaagaagcgccag
tcggccccttcgcccacacccgtggcagtggtcgctccaatgacccgcggctccagcttg
ccgtgtaacgaccacagaccggggtacgagcaggagttccaccagaggcgtttctccggg
gggagccattcctacggtggggactctccccgtctgtctccgtgcagcagtatgggaaaa
ctcagcaagtctgacgaacagctgtcctccatggagcatgacagtgggcagtgctctcga
aacaccagctgtgagacactagataacacggagagctatgacccggattatgactttctt
caccaggacttgtctgccggggataatctccctccaatcccagtagggggctgcctcagc
cccctgcccgagtctcacagcgaatcctcgtcccctgttcccggacagcatcctccccat
ccccgctttagcgctcctccaccccagcagtctgaatattggaccccccagccaaatcac
actaatcccctccagtcttcgcggatcagcgctccccccgccctgcccttgaagaagcgc
cgcagcacccaaacgtcgtccttctcctccgacggggggaccagggtgctatacgagcgc
tatccgtctcagtacgacaacctgtcggaggaagagctccaccccactcccccgttcccc
cttttcacccccatctcgcccatgccccagacaaacgggggcgtgttcgtttcccagtac
gttgccagcgaaaatgcagacgttcccgccagcccaccgccgctgccggagaagaaaagc
aagcacattcttcagtacatgcagtttgtggaggactactcggagccgcagccttcggtt
ttctaccagatgcctcagagtgaaagcatatacgagcagcgcaacaagcgtttccaggag
gtctgtggcttcaatgactctttcagcagcaccgactcggttcacgagtctgtgctgccc
ccagccctgccaccgaaacaaagacaactggcctcccactcctcctctccttcttcctcc
tcctcctcttcgctctcctgccacctccagccgtctgtggcggccatggaggaggcaggc
tctgggctgggcctcagcatgtccgtctctaactcctacctgaacggccaggcgtctttg
gccacacccacgagcttggaccaggttgccttgaccaatgccaccgttctggatggcagc
gggggcgggcccagcggttccctggctggctcagtgggctctgtggctgtctgtcttccc
tctgagtcttctctcactgactctctccacacctcagcgagcgagagcgcgaatgacgag
ggcggggagggggagtatgtcaacttgtactcgtcaagccaggccaatggggagctgcct
ctctccctcagagaaacgattgcagctgatgatgctcttcaagaccccacccctcagatg
gcatccagcaacagcaaagaggctctggacaaagaaaggaggcaaaagacttcagagttg
gctggaagcgacgaggaagacgtggatgagctctccctcatagatcacaaggagatcatg
agcaggataacactaaaacaagaaaatgacgacggccctgacgtccgcgccggatcggga
gacatcctgctggtccacgctacagaaacggaccgtaaagatctggttttgtactgcgag
gcctttctcactacgtataggacttttataaccccagaagaccttattaagaagctacac
tacagatatacaacattttgccacagtccagacaccttcaagaagcgcgtcagcaagaac
accttctttgtcctggttcgagtggtggacgagctgtgcttggtggagctgacggaggac
atcttgaagcagctcatggacctggtgttcacgctggtgtgtaatggcgagctcagcctc
gcccgcgtgcttcgcaagaacatcctggataaggtggagcaaaggaagctgctacgctac
actaactctcttaagcccctggctgccagaggagtctctgcaaggccgggaactcttcat
gacttccgcagtcacgaaatcgctgatcaactcactcttcttgatgctgaacttttctac
aaaattgagattccggaggttctgctttgggcaaaagagcaaaatgaggagaagagtccc
aacctgactcagttcacagagcactttaacaacatgagttattgggtccgatctctgata
attcagcaggagaaagcccaagacagagagaagctgctcctcaagttcataaagattatg
aagcacttaagaaagttgaataacttcaactcctacttggcaatactgtccgctctggac
tcggcccccatcaggaggctggagtggcagaaacagacctcagagggtttggaggagtac
tgcactctgatcgacagctcctcctccttcagggcgtacagggctgctctggccgaggtg
gagccgccgtgcatcccgtacttaggtctcattcttcaagacctgacatttgtacacctg
gggaaccccgacctgatcgatgggaaggtcaacttctccaaacgttggcagcagttcaac
attctggacagcatgaggcgcttccagcaagtgcattatgagttaaagcgcaacgaagac
atcatctctttcttcaacgacttcagcgaccacctggctgaggaggctctgtgggaactg
tcattaaagataaagcccaggaacattaccaggcgcaggacggagcgcgaggagaagaac
ttgggcctgtga

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