KEGG   Oryzias melastigma (Indian medaka): 112162979
Entry
112162979         CDS       T07439                                 
Symbol
wdr36
Name
(RefSeq) WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112162979 (wdr36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oml03009]
    112162979 (wdr36)
Ribosome biogenesis [BR:oml03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    112162979 (wdr36)
SSDB
Motif
Pfam: Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Utp21 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 CFAP251_N Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_VPS8 Beta-prop_TEP1_C ANAPC4_WD40 WD40_MABP1-WDR62_1st ASA1 Beta-prop_WDR41 Beta-prop_IFT140_1st DSE1_N Beta-prop_NOL10_N Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_WDR19_1st Tricorn_2nd WD40_RFWD3 WD40_like Cytochrom_D1 Beta-prop_WDR35_2nd DUF6811 ELYS-bb
Other DBs
NCBI-GeneID: 112162979
NCBI-ProteinID: XP_024154791
Ensembl: ENSOMEG00000005342
UniProt: A0A3B3D3F4
LinkDB
Position
LG12:complement(48187..55725)
AA seq 885 aa
MPAGGSSLFSGFRVLGLYSNHVAHALRYHAKHREFYLVTASGQRFHTFNVNRLGIVAVSN
SLPDDITCLAADRMLVFAATGRQICAFARNKEVVMRYHGHKQEVQLLLPLGDQLISSDCG
GDVIVWDVQGGDIYLQLKFDPLSFAVSAIMHPSTYLNKVLLGSSQGALQLWNIKSSKLLY
TFPGWSAGVTALQQSPAVDVVGVGTATGRIIIHNIRLDETLMSFTQDWGPVCSLSFRTDG
PPIVASASPQGHIAFWDLERRQLAAQQRHAHRTAVAGATFLHGEPLLVTNGADNAIKVWI
FDQEGGGARLLRCRQGHSAPPIVIRHHGNDGKNILSAGQDGTLQSFSTVHERFNKNLGHG
SICKKKEKKKKKGLSYEELRLPAITAFSSGVTRQSDWDGIVACHRGRLAATTWSYHRCTM
GAHHLQPPGVSRESFASAVDITACGNFAVIGSSCGRVDVYNLQSGLHRGSFGEPGKAHGG
VVRGVAVDALNHMTFSAASDSLLKFWRFKTRKQEEVVELNAAPGRLTLHRDSGMLALAFD
DFTVAIVDTETRRTVRKFTGHRGNITDMSFSPDGRWLVTAAMDCTVRTWDLPSGSLLDCF
LVAVAPVSVSMSPTGDFLATAHVDHLGVYLWTNKSLCGPVGLRPLPADYQPAEETIPGVT
AEEEEQEVTSEEADDEYQSAEQLGAELVTLSLLPESRWKSLLHLDDIKRRNRPAAPPTAP
PTAPFFLPTLPGLTPQFNVPAAVDAQSKVLPLGLLAQRSRFGSALESAQLSGSYEGALRL
LKDCGPAALAVEISCLSSEGGGASSLLLAFICMIDSMLAKGRDFDLAHAYLALFLKLHLG
AVAQDAVAMEALQQLASRLEVVWAELRVSFNQSLCLLSYIKSALL
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgccggccggcggcagctccttgttctccggtttccgggtcttgggtctctactccaac
cacgtggcgcacgcgctccggtaccacgcgaagcaccgggagttctacctggtgacggcg
tcgggacagcgcttccacaccttcaacgtgaaccgactcggcatcgtagcagtgagcaac
agccttcccgatgacatcacctgtttggccgcagaccggatgctggtgttcgcggcgacg
ggtcggcagatctgcgccttcgccaggaacaaagaggtggtcatgcgttaccatggccac
aaacaggaagtgcagctgcttcttcctctgggcgatcagctgatctcctcagactgcggc
ggggatgtcatagtgtgggacgtgcaggggggcgacatttacctgcagctgaagtttgat
ccgctcagcttcgccgtgtcggccatcatgcaccccagcacctacctgaacaaggtgctg
ctgggcagctcccagggtgctttgcagctgtggaacatcaagagcagtaagctgctctac
acctttcccggctggtcagcaggagtcaccgcgctgcagcagagtcctgcagtggacgtg
gttggcgttggcacggcgacgggccgcatcatcatccacaacattcgtctggatgagacg
ctgatgagcttcacgcaggactgggggccggtctgctcgctgtccttcaggacagacggc
ccccccatcgtggcatctgccagtccccaaggccacattgcattctgggacttggagcgt
cgtcagctggccgcccagcagagacacgcccacagaacagctgtggccggggcgacgttc
ctgcacggcgagccgctgctggttaccaacggggcggacaacgccatcaaggtgtggatt
tttgatcaagaagggggcggagccagactgctgcgctgtcgacagggtcacagtgcccca
cccattgtcatccgtcaccatggcaacgacggcaagaacatcttgagtgcaggtcaggac
gggacgctgcagtccttctccaccgtccacgagcgcttcaataagaacctgggtcacggg
tccatctgcaagaagaaagaaaagaagaagaagaaggggctgtcgtatgaggagctccgc
ctccccgccatcacagccttctcttcaggcgtcacccgtcagtccgactgggacggcatc
gtagcgtgccaccgcggccgcctggctgccaccacctggagttaccacaggtgcaccatg
ggagctcaccacctgcagcctcctggagtcagcagggagtccttcgcctcggctgtcgac
atcaccgcctgcgggaacttcgctgtgattggctcgtcctgcggccgcgtcgacgtctac
aacctgcagtccggcctgcaccgtggcagcttcggggagccgggcaaagctcatggcggg
gtggtgaggggcgtggccgtggacgcgctgaaccacatgaccttcagcgccgcctcggat
tcgctgctgaagttctggcgcttcaagacgagaaaacaggaggaagttgtggagttgaac
gcagctccggggaggctgacgctgcaccgggacagcgggatgctagcgttagcgtttgac
gacttcacggtggccatcgtcgacacggaaaccagacgcaccgtcaggaagttcaccggt
caccgtggaaacatcaccgacatgtcgttcagccctgacggccggtggctggtgaccgcg
gccatggactgcaccgtccggacctgggacctcccctctggcagcctgctggactgcttc
ctggtcgccgtggcgccggtcagcgtgtccatgtcaccgacgggagacttcctggcgacg
gctcacgtggatcacctgggcgtgtatctttggaccaataagagtttgtgtggacctgtg
gggctccgccccctccccgctgactaccaaccagcagaggagacgattcccggagtgacg
gcagaggaggaagaacaggaagtgacatcagaggaagctgatgatgagtatcagtcagcg
gagcagctgggggcggagcttgtgactttgtctctgctgccagagtcgcggtggaaaagt
ttgctgcacctggacgacattaagaggaggaacaggcctgcagctcctcccacggctccg
cccaccgcccctttctttctgcccacacttcctggtctgacgccgcaattcaacgtacct
gcagcagtcgacgcacagtccaaggtgctgcctctgggtctgctggctcaaaggtcccgg
ttcggttctgctctggagtcggctcagctctccggatcctacgagggagcgctgcgcctc
ctgaaggactgtgggcccgccgcgctcgccgtggaaatctcctgtctgtcatcggagggg
ggcggagccagcagcctgctcctggcattcatctgcatgattgacagcatgctagccaag
gggcgggacttcgacctggctcatgcttacctggctttgttcctgaagcttcatctgggg
gcggtggcgcaggatgcggttgccatggaagccctgcagcagctggcgtcccgtctggag
gtggtgtgggcggagcttagagtctcattcaatcagtcgttgtgtctgctgtcgtacatc
aagagtgcactgctgtga

DBGET integrated database retrieval system