Oryzias melastigma (Indian medaka): 112162985
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Entry
112162985 CDS
T07439
Symbol
tacr1b
Name
(RefSeq) tachykinin receptor 1b isoform X2
KO
K04222
tachykinin receptor 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04020
Calcium signaling pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112162985 (tacr1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112162985 (tacr1b)
04082 Neuroactive ligand signaling
112162985 (tacr1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oml04030
]
112162985 (tacr1b)
G protein-coupled receptors [BR:
oml04030
]
Rhodopsin family
Peptide
Tachykinin
112162985 (tacr1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
112162985
NCBI-ProteinID:
XP_024154806
Ensembl:
ENSOMEG00000022591
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All DBs
Position
LG12:2054946..2063980
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AA seq
382 aa
AA seq
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MDPLGNGSDGTGACVNCSSNQFVQPAWQVGLWAAAYCGLVAVSVLGNLAVIWIILAHERM
RTVTNYFLVNLAFAEAAMSAFNTVINFTYALHNEWYFGAVYCRFHNFFPIAAIFASIYSM
TAIALDRYMAIMHPLKQRLSSTQTRVLIGLIWVLALLLAFPQYHYSSTTLLPGRTVCFID
WPEYVTLDFRKVYYVSVALLIYFLPLCIMGWAYMTVAVTLWASEIPGDSSEHYREQLVAK
RKAVKMMIVVVCTFAVCWLPYHVYFLLHQFFPELFEQLYIQQVYLAVMWLAMSSTMYNPI
IYYCLNSRFRAGFQQVFCCCSSSAAKEELELKSPRYLQTQGSIRGSRMETVVSSAVDPAA
ACAPHVENTNGSVTEALACTAC
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacccgctcgggaacggctcggacggaaccggcgcgtgcgtgaactgcagctccaac
cagttcgtgcagcccgcgtggcaggtcggcctgtgggccgccgcgtactgcggcctcgtg
gccgtgtccgtcctcgggaacctcgcggtcatctggatcattctggcgcacgagcgcatg
aggacggtcaccaactatttcctggtgaacctggccttcgccgaggccgccatgtcagcc
ttcaacacggtgatcaacttcacctacgcgctccataacgagtggtactttggcgccgtt
tactgccgcttccacaacttcttccccatcgccgccattttcgccagcatttactccatg
acggccatcgccctcgacagatacatggccatcatgcaccccctgaagcagcggctgtcc
tccacccagaccagggttctgatcggactcatctgggttctggctctgctgctggccttc
cctcagtaccactactcctccaccaccttgctgcccggtagaaccgtctgcttcatcgac
tggccggaatacgtcacgttggacttcaggaaagtttactacgtatccgtggctctgctg
atttacttcctgcccctgtgcatcatgggatgggcgtacatgaccgtcgccgtcaccctc
tgggcgagcgagatccccggtgactcgtctgagcactacagagagcagctggtcgccaaa
cgcaaagcggtgaagatgatgatcgtggtggtgtgcaccttcgccgtctgctggctgccg
tatcacgtctacttcttgctgcaccagttcttccccgagctcttcgagcagctctacatc
cagcaggtgtacctggccgtcatgtggctcgccatgagctccaccatgtacaaccccatc
atctactactgcctcaacagcaggttcagagccggcttccagcaggtgttctgctgctgc
tcctccagcgccgccaaagaggagctggagctcaagtccccccggtacctgcaaacacag
gggagcatccgcggcagccggatggagacggtggtttctagcgccgtggatcctgcggcg
gcgtgcgctcctcacgtggaaaacaccaacggctccgtcacggaggcgctcgcctgcacc
gcctgctga
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