KEGG   Oryzias melastigma (Indian medaka): 112162986
Entry
112162986         CDS       T07439                                 
Symbol
ubc
Name
(RefSeq) polyubiquitin-C
  KO
K08770  ubiquitin B/C
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04120  Ubiquitin mediated proteolysis
oml04137  Mitophagy - animal
oml04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112162986 (ubc)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112162986 (ubc)
   04137 Mitophagy - animal
    112162986 (ubc)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    112162986 (ubc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112162986 (ubc)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oml04147]
    112162986 (ubc)
Ubiquitin system [BR:oml04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   112162986 (ubc)
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   112162986 (ubc)
  Exosomal proteins of other body fluids (saliva and urine)
   112162986 (ubc)
  Exosomal proteins of colorectal cancer cells
   112162986 (ubc)
  Exosomal proteins of bladder cancer cells
   112162986 (ubc)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 112162986
NCBI-ProteinID: XP_024154807
LinkDB
Position
LG12:2007326..2009369
AA seq 229 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaaccctcactggaaagaccatcaccctggaggtggagcccagt
gacacaattgaaaacgtgaaggccaaaatccaggataaggaaggcatccctcccgaccag
cagaggctgatctttgccggaaaacagttggaagatggccgcaccctgtccgactacaac
atccagaaggagtccaccctccacctggtgctccgcctgagaggaggcatgcagatcttt
gtgaaaaccctgaccgggaagaccatcaccctggaggtggagcccagcgacaccatcgag
aacgtgaaggccaaaatccaggataaggaaggcatccctcccgaccagcagaggctgatc
tttgccggaaaacagttggaagatggccgcaccctgtccgactacaacatccagaaggag
tccaccctccacctggtgctccgcctgagaggaggcatgcagatctttgtcaaaaccctc
actgggaagaccatcaccctggaggtggagcccagcgacaccatcgagaacgtgaaggcc
aaaatccaggataaggagggcatcccacccgaccagcagaggttgatcttcgctggcaag
cagctggaggatgggcgcaccctgtccgactacaacatccagaaggagtccaccctccac
ctggtgctccgcctgagaggaggaaactaa

DBGET integrated database retrieval system