Oryzias melastigma (Indian medaka): 112162994
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Entry
112162994 CDS
T07439
Symbol
ssh1b
Name
(RefSeq) protein phosphatase Slingshot homolog 1 isoform X3
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112162994 (ssh1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112162994 (ssh1b)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112162994 (ssh1b)
3.1.3.48 protein-tyrosine-phosphatase
112162994 (ssh1b)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
112162994 (ssh1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
Y_phosphatase
Tc-R-P
PTP-SAK
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
112162994
NCBI-ProteinID:
XP_024154825
LinkDB
All DBs
Position
LG12:13450367..13462699
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AA seq
818 aa
AA seq
DB search
MALVTLQRSPTPSVASSTSSAGEDIGSDDDRKNNQSLSESFFMVKGAALFLQQGGATQEP
KTPTHHKHAGDLPQHLQIMFKILRSEDRIKLAVRLESGWSDRVRYMVVIYTNGNQDTEEN
IVLGMDFTDKDSKSCSIGMVLPLWSDTNIHLDGDGGFSVSTAGRSHVFKPVSVQAMWSAL
QVLHKACELSRRFNYFPGGIALTWMAFYESCITSEQSFINEWNAMTDLETTRSESPNVFV
DRPTERERTESLIRAKLRNIMMFQDLENITSKEIRNDLEQHMSCHLKEYKEFIDNEMLLI
LGQMDKATLIFDHVYLGSEWNASNLEELRECGVGYILNVTREIDNFFPGMFCYQNVRVYD
EDATDMLAHWNDTYNFIAKAKKNNSKCLVHCKMGVSRSASTVIAYAMKEYSWSLEKAYNF
VKQRRSIAQPNSGFMKQLAEYEGILDASKQRHNKLWRPGADEEGSEELQASGHCAGGDGE
AWGGCGASPCRGIGLEMEPLDSLNYNYYFRRLSDSALDSEPSTPVRGPPLLGMERVFIEI
EDVERDALLDDEGFPMAHLALPGEGTAAQTCGRLDPMEDMRLRLEFSTLEEEDEEEAKKE
EAEMAALAQTPGGSDGRRDDAERSEESRLGLANLNTNNSNRLAAKRSCPAAFDDSASTGN
PLKVKPSYQSCKDCMCLPQGWRCGGPPLRLNPSRQCAIPSICIDPPGTHFTPSSVSADAP
PGLVQPCPRFYHCATCSLGDPQKMFSPMSCEETPAGGCAAEAMDEGVFRQNPGGEGLKRH
LQVSGLGFDFQLMRQKTEQLEKLQSMAMEGQLPVEPMP
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggccctggtgactctgcagcgctctcccactcccagcgtagcatcgtcgaccagcagc
gcgggggaggatattggaagtgacgatgacagaaaaaacaatcagagcctcagcgagagc
ttctttatggtcaaaggagccgccctcttcctccagcagggcggcgccacacaagaacca
aaaactccgacccaccacaaacatgcaggagatttaccgcagcacctgcagatcatgttc
aagatcctgcgctctgaagatcgcatcaaactggctgtgcggttggagagcggttggtca
gaccgggtgcgttacatggtggtcatctacaccaatggaaatcaagatacggaggaaaac
atcgttcttggaatggacttcacagataaggatagtaaaagctgctccatcgggatggtg
ctgcccctgtggagtgataccaacatccatctagatggagacggaggcttcagcgtgagc
acggcagggcggtctcatgtcttcaaacctgtgtctgtgcaggccatgtggtctgccctg
caggtcctccacaaagcctgtgaactctcacgccgattcaactatttcccaggaggcatt
gctctcacgtggatggcattttatgaaagctgcatcacctcagagcagagcttcatcaac
gagtggaatgccatgacagacctggagacgacccggtccgagtcccccaacgtgtttgtt
gaccggcccactgagagagaacgaactgagagtcttatcagagccaagctacgaaacatc
atgatgtttcaggatctggagaacatcacgtcaaaagagatccgtaatgacctggagcag
cacatgagctgccatctcaaagagtacaaggagtttatagacaacgagatgcttttaatc
ctcggccagatggacaaggccacgctgatctttgaccacgtctacctgggctctgagtgg
aatgcttccaaccttgaagaactgcgtgagtgtggagtcggctacatcctcaacgtcacc
cgagagatcgacaacttcttccccgggatgttctgctaccagaacgtccgcgtgtacgac
gaggacgccaccgacatgctggcccactggaacgacacgtacaacttcatcgctaaggcc
aagaagaataactcaaagtgcctggtgcactgtaagatgggagtgagccgctccgcctcc
accgttatcgcctatgcaatgaaggagtacagctggtccctggagaaagcctacaacttc
gtcaagcagaggcggagcatcgcgcagccaaactcggggttcatgaagcagctcgcagag
tacgaggggattctggacgccagtaagcaacgccacaacaagctgtggaggcccggcgca
gatgaggaggggtctgaggagctgcaggcgtcgggccactgtgccggtggggacggggaa
gcctggggaggctgcggggcgtccccctgccgagggatcggcctggagatggagcctctg
gactccctgaactacaactattacttcaggcggctgtcggattcggcgctggacagcgag
ccctccaccccggtgcggggcccccctctgctggggatggagcgagttttcatcgagatc
gaggacgtggagagggacgccctgctggacgacgaaggcttccccatggctcacttggcg
ctgcccggggagggcacggcggctcagacgtgcgggcggctcgaccccatggaggacatg
aggctgcggctggagttcagcaccctggaggaggaggacgaggaggaggccaagaaagaa
gaggccgagatggcggcgttggcgcaaacgcccggggggtcagacgggaggagggacgac
gctgagaggagcgaggagagtcggttagggttagccaacctcaacaccaacaacagcaac
cgcctcgccgccaaacgctcctgtcctgcagctttcgacgacagtgccagcaccggaaac
cctttaaaagtcaagccctcctaccagtcctgcaaggactgcatgtgtctcccccagggg
tggcgctgcggaggccccccactccgccttaacccctcccgccagtgcgccatcccctcc
atatgcatagacccgccgggaacccatttcacccccagctctgtgtctgccgacgccccg
cccggactggtccagccctgcccccgcttctaccactgtgccacctgcagcctgggcgac
ccgcagaagatgttctcgcccatgagctgcgaggaaacgccggccggcggctgcgcggcg
gaggccatggacgagggggtgttccgacagaaccccggcggggaggggctgaagcggcac
ctgcaggtgtccggactcgggttcgatttccaactgatgcggcagaaaacggagcagctg
gagaagctgcagagcatggccatggagggccagctcccggtggagcccatgccttaa
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