Oryzias melastigma (Indian medaka): 112163009
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Entry
112163009 CDS
T07439
Symbol
cldn5b
Name
(RefSeq) claudin-5b
KO
K06087
claudin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03272
Virion - Hepatitis viruses
oml04382
Cornified envelope formation
oml04514
Cell adhesion molecule (CAM) interaction
oml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
112163009 (cldn5b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
112163009 (cldn5b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112163009 (cldn5b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112163009 (cldn5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112163009 (cldn5b)
04147 Exosome [BR:
oml04147
]
112163009 (cldn5b)
Cilium and associated proteins [BR:
oml03037
]
Other cilia and associated proteins
Stereociliary proteins
112163009 (cldn5b)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
112163009 (cldn5b)
Exosomal proteins of colorectal cancer cells
112163009 (cldn5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
112163009
NCBI-ProteinID:
XP_024154850
Ensembl:
ENSOMEG00000022811
LinkDB
All DBs
Position
LG12:1809420..1810318
Genome browser
AA seq
215 aa
AA seq
DB search
MLSACLEVLGMTLSVTGSLLVMIACGLPMWKVTAFISSNIVVAQTTWDGLWMACVVQSTG
QMQCKIHDSMLALNHDLQAARALTVISAVLGVVGLTVTVAGAQCTTCVRDERVKEKVVHA
GGVVFILSGLCALVPLCWMANNIITDFYDLHVHASQKREIGASIYIGWAASALLLLGGSL
LCCSFSQDSRSSYPLKYAPSTPYTAGGDMDKKQYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccgcgtgcttggaggtgctgggcatgacgcttagcgtgacgggctcgctgctg
gtgatgatcgcgtgcgggctgcccatgtggaaggtcacggccttcatcagctccaacatc
gtggtggcgcagaccacgtgggacggcctgtggatggcgtgcgtggtgcagagcacgggc
cagatgcagtgcaagatccacgactccatgctcgcgctcaaccacgacctgcaggcggcg
cgcgcgctcaccgtcatctcggccgtgctcggggtggtggggctgacggtgaccgtggcg
ggcgcgcagtgcaccacgtgcgtgagggacgagcgcgtgaaggagaaggtggtgcacgcg
ggcggggtggtgttcatcctcagcgggctgtgcgcgctcgtgccgctctgctggatggcc
aacaacatcatcacagacttctacgacctgcacgtgcacgcgtctcagaagcgcgagatc
ggcgcgtccatctacatcggctgggcggcgtccgcgctgctgctgctgggggggtcgctg
ctctgctgctccttctcgcaggactcccgcagctcctaccccctcaagtacgcgccctcc
accccctacacggccgggggggacatggacaagaagcagtacgtctga
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