Oryzias melastigma (Indian medaka): 112163022
Help
Entry
112163022 CDS
T07439
Name
(RefSeq) astrotactin-2
KO
K24479
astrotactin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112163022
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112163022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
ASTN1_2_fn3
Annexin_2
ASTN_2_hairpin
MACPF
FXa_inhibition
GRP
fn3
cEGF
Motif
Other DBs
NCBI-GeneID:
112163022
NCBI-ProteinID:
XP_024154876
Ensembl:
ENSOMEG00000004936
LinkDB
All DBs
Position
LG12:11240404..11554364
Genome browser
AA seq
1412 aa
AA seq
DB search
MSFSPHLCCRLLDGRDSFPSDCTISERTAYEPHSKRREARTRSAMARILAPHLRVLLAAL
LLADAWTLGASRGATSPEEERDKEGDAETPCELKTVTVSTLPVLRENEFSFTGGAAGSVA
GGGSAAGAGGGGGAAGGGGGGGAAAAPGGGESRLLLFVRTDLPGRISVVDDLDNTALPYF
TLEMSGTVEDISQVHWKQQWLENGTLYFHVSITESELQAQTTQPTAREPAHALPEHMHLL
HISVMGGLIALLLLILLFTLVLYTRHRWCKRRRIPQKSASTEATHEIHYIPSILLGPQGR
DSYRGSRGNHQHGGSVIGMPIRETPILDDYDCDDEDGGGHSLNSTPNQLHKLSDGKVLDD
YGLNIGGHTDTMCKEDDIKHFEKRVLDPNTESVEDLMQRFQDSFRVPNTPTDMCHYQQTL
HNSSTGRRKFPSHTKATGHVFSPQGGSGSEPEDDNQTKFYTEQHRGRRRSKGHSHSPLNK
VTLTLITISTCVIAIVYATQDSCPLTVKVTLHVPEHFIADGSSFVVGMGSFLDVSNWLNP
SKLTLYYQTNSSTQWVQDFCGQRTTEPCEQICDQDTGECSCHEGYSPDPVHKHLCVRSDW
GRNEGPWPYANLEKGYDLVTGQQAPERIFRSFYSLGQGLWLPVSKSFVVPPAELSINPIA
SCKTDVLVTEDPAEVREEAMISTYFDTVEDLLASFGPVRDCSKENGGCKRNFKCVTDRQL
DSTGCMCPEGLRPMKDGSGCYDYSRGIDCTDGFNGGCEQLCLQQLVPLEDDPSSSNVLMH
CGCVQEYKLAGDGRSCLLQAENCEGSKCSRQDVHFNDTLFGEMLHGYNNKTQQVNLGQIF
QMTFRDNNFIKDFPQLADGLMVIPLPVEEQCRGVLSEPLPNLQLLTGHAQFSEAVGYPMV
QQWRVRSNLYKVKLSSITLSSGFSKVLKTLSADSTREELLAFIQEYGSHYVSEALYGSEL
SCSIYFPSKKVQQQLWLQYQKDATEQGAGTGGRRDLKSIPFISYLSGLQKSQLLSDDMVN
GVEIRCEEKGSCQAGCHLCHHQAIPSGGGGGGVAGLSGRGRGGDKKSGEQPSPTPVLLEV
TRVVPLYSLVQDNVTREAFKSATMSSYWCAGRGDVIDNWCRCDLSAFSIDGLPNCSPLRQ
PILRLAPYLEPSSTTVALEWVDVEPQIGYKISDYIIQQKRMEDPSEAEVYTGEILSLKDD
LFSGLGSPCVVAGRRSGDHAHSLLYSVVFKCLEPDSLYRFTLYAVDNRGSHSESSFVSVR
TSCPLVDDTRAEELADRVYNLYNGYTSGKEQQMAYNMLIEIPPPLLYRVQHHYNSHYEKF
GDFVWRSEDELGPRKASLILRRVEKISLYCRSLLSSTYIQSRTDTMAYVYCRSEEERPPS
NTWHGSLHDGHTMCMEKLISVQRNTYSNTKLR
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgtcattctctccacacctgtgctgccgcctcctggacggacgcgactcctttcccagc
gactgtactataagtgaacggacagcttatgagccccactcaaagcggagagaagcacgc
acgaggagcgccatggcgaggatattagcgccgcacctccgcgtgctcctcgcggctctc
ctcctggcggacgcgtggactctcggggcgagccgcggggcgacgtcgcccgaagaggag
cgggacaaagagggcgacgcggagacgccgtgcgagctgaagaccgtcaccgtgtctacc
ctgccggtcctccgcgagaacgagttcagcttcaccggcggagccgcggggagcgtggcc
ggcggagggagcgctgccggagcaggtggcggcggaggagccgccggaggaggaggagga
ggaggagcagcagcagcgccaggagggggggaatcccgacttctgttgttcgttagaact
gacctacccgggcgaatctctgtagtggatgatcttgacaacactgctcttccttacttc
actctcgaaatgtccggtacagtagaagatatttctcaggtacactggaaacagcagtgg
ttggaaaatgggacgctttactttcacgtgtctataacggaatctgagctccaggcacag
actacacagcccacagcccgggagcctgctcacgcgctgcctgaacacatgcatctgcta
cacatctcagtcatgggaggcctaattgcactcctactcctaatcctcctcttcaccctt
gtcctgtacacccgccaccgatggtgcaagcgtcgtcgcatcccccaaaagagcgccagc
accgaggccacccacgagatccactacattccctccatcctgctcggtccgcagggtcgc
gacagctaccggggctcccgaggaaatcaccagcacggcggctccgtcatcggaatgccc
attcgggaaacgcccatcctcgatgattacgactgtgacgacgaggatggaggcgggcac
tcgctgaactccacgcccaaccaactccacaagctcagcgacgggaaagtcttggatgat
tatggacttaacatcggagggcacacggacaccatgtgcaaagaggatgatattaagcat
ttcgagaaacgagttcttgacccaaacacagagtcggtggaggatttaatgcagcgcttc
caggacagttttcgtgttcccaacacaccgacagacatgtgtcactaccagcaaacgtta
cacaactcctccacaggacgccggaagttccccagccacacaaaagcaactggacatgtg
ttcagtccacaagggggatcggggtcagagcctgaagacgacaatcaaacaaagttttac
acagagcaacacagaggccgaagacgcagtaaaggccactctcacagtcccctgaataag
gtcaccctgacgctgattaccatcagcacatgtgtcattgccattgtctatgctacgcag
gattcctgccccctcactgtcaaggttaccctccatgtgcctgagcacttcattgcagat
ggaagcagctttgtggtgggcatgggcagcttcctggatgtctctaactggctaaatcca
tccaaattaactctctattatcagaccaactcgtcaacgcagtgggtccaagacttctgt
ggccaaaggaccactgagccctgtgaacagatttgtgaccaggacacaggagaatgcagc
tgtcatgagggttattcccccgatcctgtccataaacacctctgtgttcggagcgactgg
ggtcgtaacgaaggtccttggccatatgctaacttagagaaaggatatgacctagttaca
ggacagcaggccccagagaggatcttcagatcattctacagtctgggtcaaggattatgg
ctgccagtcagcaagagctttgtggtgccaccagcagagctgtcaatcaaccctattgcc
agctgtaagacagatgtgttggttactgaagatccagcagaggtcagggaagaggcaatg
atatccacatactttgatacagtagaagacctgttggcgtcttttggaccggtgcgagat
tgttccaaagagaatgggggctgcaaacggaatttcaagtgtgtcaccgatcgtcagtta
gactcaactggttgcatgtgtcctgaggggctgaggccaatgaaggatggctcaggttgc
tatgactactccagaggcattgactgcacggatggcttcaatggaggctgcgagcagctg
tgtctccagcagcttgtgcctctggaagatgacccaagttccagcaatgtgctcatgcat
tgcgggtgtgtgcaggagtacaagctggcaggggacgggcgctcctgcctcctgcaggca
gagaactgtgaggggtccaaatgctcaaggcaggatgtccacttcaatgacactctgttc
ggcgagatgttacacggatacaacaacaaaacgcaacaggtcaatttggggcagattttc
caaatgaccttcagagataacaacttcatcaaggacttccctcagctggccgatgggctc
atggtcattcctttaccggtggaggaacagtgtcgtggggttctgtcagagcctcttccc
aatctgcaactactcacaggccatgcccagttcagtgaagcagtaggctacccaatggtt
cagcagtggagagtacgcagcaatctttacaaagtcaaactcagctctattaccttatct
tcaggcttttcgaaggttctgaagacgctttctgcagacagcacacgtgaagagctcctg
gcctttatccaggaatacggcagccattacgtgtctgaggcgctctatggttctgagctc
agctgcagcatctacttccccagcaagaaggtccagcagcagctctggctgcagtaccag
aaagatgcaaccgagcagggagctggaaccggtgggcggcgtgatctgaagtcaatcccc
ttcatcagctacctctcaggtctgcagaagagtcagctgttgtctgacgacatggtgaac
ggcgtggagatccgctgcgaagaaaagggcagctgtcaggccggctgccatctgtgccat
caccaggctatcccaagtggaggaggaggaggaggagtagcaggactgtcgggaaggggc
cgaggtggtgacaagaagagcggagagcagccgtcccccacccctgtcctgctggaggtc
actcgtgtcgtgcccctttacagcctggtccaagacaacgtcaccagggaggccttcaag
agcgccacgatgagctcatactggtgtgctggaaggggcgatgtcattgataactggtgt
cgctgtgacctgagtgccttcagcatcgatggcctgcctaactgcagtcccctcaggcag
ccgatcttgcgcctcgccccttacctggagccctccagcacgacagtggcgctggagtgg
gtggatgtggaaccacagattggctacaaaatttctgactacatcatccagcaaaaacga
atggaggacccctcagaggcagaagtctacacaggtgagattctgagcttaaaggacgac
ctgttctctggtctgggttcaccatgtgtggttgctggaagacggagtggagaccacgcc
cattctttgctgtactctgtggtttttaagtgcctggaacctgacagcctctacagattt
actctctatgcagtggacaacagaggcagccactctgagtcaagcttcgtctccgtgcgc
acgtcttgtccgttggtggacgacactcgcgctgaagaactggcagatagggtgtacaac
ctgtataacggctacaccagtggcaaggagcagcagatggcctacaatatgctgatagag
attccacctccacttttatacagagtgcagcatcactacaattcccactatgagaagttt
ggagactttgtgtggcggagcgaggacgagcttgggcccagaaaagccagcctcatcctc
cgcagagtcgagaagatcagcctgtactgccgctccctcctgagcagcacctacatccag
agccgcacggacaccatggcgtacgtctactgccggagcgaagaggagcgacctccgagc
aacacgtggcacggctctttacacgacggtcacaccatgtgcatggagaaacttatttct
gtacagcgcaacacatacagtaacaccaaactgcgatga
DBGET
integrated database retrieval system