Oryzias melastigma (Indian medaka): 112163028
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Entry
112163028 CDS
T07439
Symbol
prrc2b
Name
(RefSeq) protein PRRC2B
Organism
oml
Oryzias melastigma (Indian medaka)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT2_N
Motif
Other DBs
NCBI-GeneID:
112163028
NCBI-ProteinID:
XP_024154889
Ensembl:
ENSOMEG00000008601
LinkDB
All DBs
Position
LG12:8879043..8898535
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AA seq
2209 aa
AA seq
DB search
MSDRLGQITKSKDGKSKYSSISLFDKYRGKSIETQKNTVVTRHGLQSLGKVATARRMPPP
AHLPSLKSENKGNDPNVIIVPKDGSGWANKQEQPDQKSSIASASQLQELQPQQASQKSVS
NLQKPLPVANQENPNTGGPKQWAQLNGKAAEHDGLRASNRLQPFSHEEFPTLKAAGEQDR
VGKERSGFDPSYGPGPSLRPQNVTSWREGGGRNLQPSSLTLGLPADPEGKPTAVGETGTP
PASSHPPTATGTAPSAAVTAPSPNLDAKDPSLRPAQPVRRTTVPTALQYQLHHTSTAVYH
DMLPAFMCSKDTRETSGTEHVPTTSAAPVRFDSKPAFRQTYAKPEVLNGDARKENRFVRA
PLSRISSQPIRRPGERPPRPAIINPEDLKDLDDLDNDFEDGWAGLHEEVDYSEKLKFSDD
EEDHSSSDKKIWNDWEKGRETRFSLSSGEVSYQQEGLEDSYSYQHHNQELPRKPSSRYPS
VDSQTQQKNYGEPLSDQDEHHRQSQSQPPARAKYVSPELSEAVERARRRREEEERRAREE
RLAACAEKLKKLDEKFGKTEKQMPRIEDGPKDAEGKRTPLSPSKEQSKSQSDYWQYSSKE
GSECLRGSSPTRSYQEEPGFTNQPGSEDDGPELSSPTGDYGGRQSSKPLPPRFQKQHHHQ
EQVMKMPQWQQSGHPSSGQRGYYPPSVLGFDPRWMMMPPFMDPRMAQGRSPVDYYSGSVH
SGVKAGTHQDHLNSPSSDEGCHSNLHQERRTSSTEPYPVWNQDYPLRSFTPPYQRQHETS
DGGKSGDRITSHLDSYEDVTKESLARSHDDLHHHAYQNRGSDKEQQHDDQGLLSSSKSLC
QSFSENEYTKQDSRDSYLKEELESHAEGFDGPTDNWKREGSQKQDGIFNSGQSHWSEASS
SSSSSASQPCETSGRTLTRRTGPIKKPVLKALKVEDKENEKPKPKPEEKPVPYRLDKEVL
TNVHDLKKDNQLSVSRRSASPVVEKPPEEKQRQSPAPAKIDRHLNINTPAFSKENSWASG
KTHPPKEGPESRECQAPRRNNWIFIDEEQAFGAVRGTGRGRGRGFREFSSRGGTRGGRSG
ENLRGMYNNSTMSGTQRPGRGRALSRDFVKMEDFQRGKPRRRNVSETLSEASEYEELPKR
RRQKGSENGEANAEAAEARKADRESWRSNKVYTDDQAALDAREKTKSSRGYGGRVLPPRL
NATGNYSRSFGGTRDIPTWRGRGSQFSGNAPSVQENGYGPEAAYPSRPPAERDALKYPPK
FSGPFLENSEDREGEYYFESDNPDRQMLRRRRPPRQDKPPRFRRLRQEREPGSNQWTSDE
YVNGDFAKPWPSRSKGSAEDGWPSGHYPGRSGQHAQAEEWETGSDNSDFNDWREKRGGGA
GSQGHGDVPSDSGHSEPGSGEKRELSKRSFSSQRPLVERQNRKGEPPLLEGSKMVRTSEN
LPISLSGRSDSWQNGGISKRSPDDCGPFYSTDPSSEDKESCESAGKKMDKELKAGAVKTD
IDETISPYEISLINGESGGASSSSDGYQDALSKKQRRPQEDERRRKEQGAPVPVKNRTMA
SKIPPRFAKKQGSLSIEQPEEAISSNNLGTEIWESNSSALSVQSSGGDSWTKQVSYAGSE
PNSEDSDAGPEQNKEQHKPGPIGNERSLKHRKGSEGVDRLEGGPITPVNGVDLHVDAVLP
VPPIEFGVSAKDSDFSLPPGSTPVPVSNPVNKLQDALTTNTSLNQSLPILRSNHLQPGIN
LSSISYPTADLTLKMESARKAWENSQSLPEQGSPGGGASGAQPACSVGSSSGVSYSTFGG
VSMPPMPVASVAPSMSIQGNPIPPLYLDGHVFQSQPRLVPPTMTQQQTYQQAPTAQQIPI
SLHTSLQAQAQLGLRGGLPVSQSQEMFNSIPPFRSQVYMHPNLSQPNPMVLSGGGPIKGP
YSAFPGMQPSDMVKPQSGSHYQPLNGSQQLVYDSQMNQGPGMGSSQLMDSQLIQVTMPLP
GSQLRYGSAQQHLILPQSIQLQQGQSLSVGAPRRMLPPGSQPAVLTGSRESSQMEMKGFQ
FSEKASHSPGLSGGSYRPGSASPSGKPSGPGGPVGPLPTHFPQQIPPAQGSMVMHMRPPT
TGPFPNPIQRPVMPVNKPVVIRSPPYPNPGRDPPHSTPPSVPEPPVKGPEDGMKSKTLRD
MCKAVGEGKSPPGGMTSKIQEPLPSTGQAKPARTGAIKPQAVKVEEGKA
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcgtttggggcaaattaccaagtccaaggatgggaaaagcaagtattcctca
atcagcctatttgacaagtacaggggaaaatcaatagaaactcagaaaaacacagtagtt
acgcgacatggcttgcaaagtcttggtaaagtggcaacagcccggcgcatgcccccacct
gctcatctgccgagcttgaagtctgaaaacaaaggaaacgaccccaacgtgattatagtg
cccaaagacggttcaggatgggcgaacaagcaggaacaacccgatcaaaagagttctatt
gcatcagcgtcacagctgcaggagttgcagccacagcaggcttcacagaaatctgtctcc
aatcttcagaagcccttaccagtagccaaccaggagaacccaaacacaggtggaccaaag
caatgggcccagctaaatggaaaggcagccgagcacgatggtttaagggcctcaaaccga
cttcagcccttctctcacgaggaatttcccacactgaaggcagctggagaacaggacagg
gttggcaaggaaagaagcggcttcgatccgtcgtatgggcccggaccaagcctccgcccc
cagaatgtgacgagctggagggaaggtggtggcaggaaccttcagccctcttccctgacc
ctcgggctgccagcagatcctgagggtaaacccactgccgtcggtgagactgggacccct
ccagcctcgtctcacccccccactgccaccggcaccgccccatctgctgcagtgacggct
ccgtcaccaaacctcgacgcaaaggacccctccctccgacccgcccagcctgtgcgcaga
acaaccgtccctactgctctgcagtaccaacttcaccacacctcaaccgcggtctaccac
gacatgttacccgcatttatgtgctccaaagacacgcgagagacttcaggtacagaacac
gttcccaccacttcagcggcgccggtccgattcgacagcaaacccgctttcaggcagact
tatgccaaacctgaagtcctaaatggtgatgccagaaaagagaatcgtttcgttcgcgct
ccgctttctagaatctcttctcagcccatccgcagacccggtgaaagaccacctcgccca
gccatcataaaccccgaagatctgaaggatctggatgatctggataatgactttgaggat
ggatgggctggacttcatgaagaagttgattatagtgagaagcttaagtttagtgatgat
gaagaagaccactcttcaagtgataaaaagatttggaatgattgggaaaagggaagagaa
acccgattctctttaagctcaggcgaagtgtcataccaacaggaggggcttgaagacagt
tattcctaccaacatcacaaccaggagcttcccagaaagcccagcagcagatatccatca
gtcgacagtcagactcaacaaaaaaactacggcgagccgctaagcgaccaggatgagcac
catcggcagtctcagagccagccgccggccagggctaaatacgtttcgccggaactatcc
gaagctgtcgaaagagcacgcaggagaagggaggaggaagagcgacgcgcccgggaggag
cggttggctgcgtgtgctgaaaaactcaaaaagttggatgagaagtttggaaagactgaa
aagcagatgccgaggatcgaggacggtccgaaggacgcagaaggcaaaagaacccctctg
tccccaagcaaagagcagagtaaaagccagagcgattactggcagtacagctcaaaagag
ggaagcgagtgtcttcgaggcagttctcccactcgtagttaccaggaagagcccggcttc
accaaccaacctggcagtgaggatgatggccccgagctttcctctcccactggagactac
gggggacgtcagtcgtccaaaccacttccaccccgttttcagaaacagcaccaccatcag
gaacaggtgatgaaaatgccacaatggcagcagtctggtcacccttcatccggccagcga
ggatactatcccccatccgttctcgggtttgatccccgctggatgatgatgccacccttc
atggatccccgtatggcccaaggacgctcacctgtggactattactctggatctgttcac
tctggagttaaagctggtacccatcaagaccacctgaacagccccagttcagatgaagga
tgccattccaacttgcaccaagagaggagaacttcctccactgagccttacccggtgtgg
aatcaagactaccctttacgcagcttcaccccaccctaccagagacagcatgaaacatca
gacggtggcaagtctggcgacagaatcacttcccatttggactcctatgaggatgtgact
aaggagtctctggctcgctcccacgacgatctccatcatcacgcctaccagaaccgaggc
tcagacaaggagcagcaacacgatgaccaaggcctgctcagcagctccaagagcctctgt
cagagtttctcagagaacgaatacacaaagcaagactctagagacagctatctgaaagag
gagctcgagtctcacgccgagggctttgatggacccacggataactggaaaagagaagga
agccagaaacaagatggcattttcaacagcggccaaagccactggtctgaggctagttcc
agctccagcagcagtgccagccagccctgtgagacgagcgggcggaccctgactcgcaga
accggacccatcaagaaaccagttctcaaagctctcaaagtggaagacaaggagaacgaa
aagcccaaacccaaacccgaggagaaacctgtcccctaccgcctggacaaagaagtcctc
accaacgttcatgacctgaagaaagataatcagctgtctgtcagccggcgctcagcctct
cctgtcgttgagaagccgcctgaagaaaagcagcgtcagtcaccagctcccgctaaaata
gaccggcatctgaacatcaacactcccgccttctccaaggagaacagctgggccagcggg
aaaacccacccaccgaaagaggggccggaaagccgggaatgccaggcgccacggcggaat
aactggatatttatcgatgaagaacaagccttcggtgccgtcaggggaacggggagaggc
cgcggtcgaggcttcagggagttcagctctcggggtggaacccgcggcggtcgaagtgga
gagaacctccgagggatgtacaataacagtacaatgagcggcacccagcggccaggaaga
gggcgggctttgtccagggactttgtaaaaatggaggattttcagaggggcaaaccgcgc
aggcgaaacgtcagcgagacgttgagcgaagcttcagagtacgaagaacttcccaaaagg
cgccggcagaagggctcagagaacggagaggctaatgccgaagcagcagaagcccgtaag
gccgacagagagtcttggagatccaacaaggtgtacacagatgatcaggctgctttagac
gcgagagaaaagaccaagtccagccggggttatggaggtcgagttcttccccccaggctg
aacgcgaccggcaactacagtcgaagtttcggagggactagggatatcccgacatggcgg
ggccgagggtcccagtttagcggcaacgctccttctgtgcaagaaaatggttacggtcct
gaagctgcgtatccatcccgacctccagcagagcgcgacgctcttaaatatccccccaag
ttttcgggccctttcttagaaaacagcgaggacagagaaggggagtactactttgagagc
gataatcccgaccgccagatgttgagaagacggcgtcctccgcgtcaagacaaacctccc
cgcttccgccgtctacggcaagaacgtgagccgggctccaaccagtggaccagcgacgag
tatgtgaacggagactttgccaaaccctggccgagtcgctccaaaggctctgcagaggac
ggctggccaagcggtcattaccctggacgctccgggcagcacgctcaggcggaggagtgg
gaaacgggctcggacaacagcgatttcaatgattggagggagaagcgtggcgggggcgcg
ggctctcaggggcacggagacgttccctccgactcgggccacagcgagcctggctctggt
gagaagagggaactttcaaagagaagcttctccagccagagacccctggtggagcggcag
aacaggaagggggagccccccctgttggagggaagcaagatggttcgcacttcagagaat
cttcccatttctttgtctgggaggagtgacagctggcagaatggaggaatttcaaagagg
agtccagatgactgtggacctttttatagcacagatccatcctcagaagacaaggagtcc
tgtgaatcggcagggaagaagatggataaggagctgaaagcaggagctgtaaagactgac
attgatgaaaccatctccccatatgagattagcttaatcaacggagagagcgggggagcc
agttctagttcagatggataccaggatgctttgtccaaaaagcaaagacgtcctcaagag
gatgagaggaggagaaaagaacaaggagcgcctgtgccggtcaaaaaccggacgatggca
tccaagattcctccacgctttgctaaaaagcaaggaagcctgagcatcgagcaaccagaa
gaagcaatttcctccaacaatctgggaactgaaatctgggagagcaacagctcagctctg
tccgtgcagtcttcaggaggggactcctggaccaaacaggtgtcttacgcagggagcgag
cccaactctgaggactccgatgctggcccagaacaaaacaaagaacagcacaaacccggg
cccattggaaacgaacgctccctgaagcaccgaaaaggctctgaaggcgttgacaggctg
gaaggcggccccatcacaccggtcaatggtgtggatctccacgtggacgccgtcctgccc
gtgcctcctattgagttcggcgtcagcgccaaggactccgatttcagtctcccaccagga
tccaccccggtgcccgtatccaaccccgttaacaagctccaggatgctcttaccaccaat
acgtctttgaatcaaagtttacccattctgcgctccaaccatctgcagcctggcattaac
ctcagcagcatttcctaccccaccgctgacctcactctcaagatggaatctgcccgcaaa
gcctgggaaaattcccagtccctgccagagcagggctctcctggcgggggcgcttctggg
gctcagcctgcctgcagtgtgggctcgtccagcggtgtcagctacagtacctttggaggc
gtttcaatgcccccaatgccagttgcgtctgtggcaccttctatgtccattcaaggtaat
ccaatccccccactctacctggacggccatgttttccaaagtcagcctcgccttgtgcct
cctaccatgactcagcagcagacttaccaacaggctcccacagcccagcagattcccatc
tcattacacacctcccttcaggctcaggcacagttgggacttcgggggggtcttcctgtc
tcccagtcccaggagatgttcaactccatccctcccttcaggtcccaggtttacatgcac
cccaacctttcacagcccaaccccatggtgctgtctggtgggggccccatcaagggccct
tactcggcttttcctggcatgcagccctcagacatggtgaaaccgcagtcaggctctcac
taccagcctttgaacggcagccagcagctggtgtacgacagtcagatgaatcaaggacct
ggtatgggttcttctcagttaatggactctcagctcattcaggtgactatgccgctgccc
ggctctcagctgcgttacggctccgctcagcagcatctcatcctgccacagtccatccag
ctgcaacaaggacagagcctgtcggtgggagcgccccgccgaatgttaccgccgggctcc
cagccggcggttctgaccggcagcagagagagctcacagatggaaatgaaaggctttcag
ttctccgagaaggccagtcattccccaggtttgtcaggaggctcgtacaggcccgggtct
gcaagcccgagcggtaagccctccggtcctgggggccctgtaggccctctgcctacacat
tttcctcagcagatcccgcctgctcagggcagcatggtgatgcacatgcggccccccacc
accggccctttccccaaccccattcaacggcctgtcatgccagtcaacaagcctgttgtc
attcgctcccccccttaccccaaccccggccgtgatcctccccactccacccccccttca
gtccctgagcccccagtcaaagggccagaggatggcatgaagagtaagacattgcgagac
atgtgcaaggcagtgggggagggcaagtccccacccgggggcatgaccagcaaaatccaa
gagcccctaccctccacgggtcaagccaaaccagcacgaactggagccatcaaaccccag
gctgtgaaagtcgaagagggcaaggcataa
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integrated database retrieval system