Oryzias melastigma (Indian medaka): 112163035
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Entry
112163035 CDS
T07439
Symbol
hnrpkl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K, like
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112163035 (hnrpkl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112163035 (hnrpkl)
Spliceosome [BR:
oml03041
]
Common components
Common spliceosomal components
hnRNP proteins
112163035 (hnrpkl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
MOEP19
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
112163035
NCBI-ProteinID:
XP_024154907
Ensembl:
ENSOMEG00000010595
UniProt:
A0A3B3DDB7
LinkDB
All DBs
Position
LG12:8218332..8230243
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AA seq
420 aa
AA seq
DB search
MTMEMKVKQEDKDVTFSNSDTNGKRPAEDMDEEQAFKRSRNADEMVELRVLLQSKNAGAV
IGKGGKNIKALRTDYNASVSVPDSSGPERILSVSAGIDTIGEILLKIIPTLEEYQHYSGI
DFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPER
VVECIKVILELVSETTIKGRSQPYDPNFYDETYDYGGFTMLFEERGRRPMGGFPIRVRGG
FERMPPPRGSRPPPPSRRDYDDLSPRRGPPPPLSRGLRGGSRARNLPLPPPPPPRGGDRF
SHGSYHSSLDDRPSDRRSRGDRYDSMSGDRYGSRGSYSDIGGPVITTQVTIPKDLAGSII
GKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVRQYSGRFF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactatggaaatgaaagtcaaacaggaggacaaagacgttacattcagcaactctgac
actaatggtaagcgccctgctgaggacatggacgaggagcaggccttcaaacgttcccgc
aacgcagacgagatggtggagctgcgtgtgctgcttcagagcaaaaatgctggggctgtt
attggaaaggggggaaagaacataaaagcactgcgcacagactacaatgccagtgtatca
gtcccagacagcagtggcccagagcgaatcctcagcgtgagcgccggcatcgatactatc
ggagagattttgctgaaaataataccaactttagaagagtaccaacattacagcgggatc
gacttcgactgtgagcttcgtctgttgatccaccagagcttggcaggtggaatcatcggg
gtgaaaggcgccaaaataaaggaactgagagagaacacccagaccaccatcaagttgttc
caggagtgctgtccacactccactgacagagttgtcctggtgggaggaaagccagaacgt
gtggttgaatgcatcaaagtcatcctggagctggtgtctgagacgaccatcaaaggccgc
tcccagccgtacgaccccaacttctacgatgagacgtacgactacggcggcttcaccatg
ctcttcgaggagagggggaggcggcccatgggcgggttccccatccgcgtgcggggtggg
tttgagcgcatgcccccgccgcggggcagcagacctccacctccctccagacgagattac
gacgacttgagtccccgcagaggccccccaccgccactcagcagagggttacggggcggt
agccgggcacgcaacctgccccttcctccaccgccgccaccaagagggggagaccggttc
tctcacggcagctatcatagcagcttggatgacagaccaagtgacaggagaagccgagga
gaccgttacgacagcatgagtggagaccgatatggtagtagaggctcctacagtgatatt
ggaggcccggtcatcacaacacaagtcaccatcccaaaagatctggcgggctccatcatc
ggtaagggcggtcagaggatcaagcagatccgtcacgagtccggagcatccatcaagatc
gacgaaccactagagggctctgaggaccgtatcatcaccatcacggggacacaggaccag
atccaaaacgcccagtacttgctgcagaacagtgtgaggcagtactccggtcgcttcttc
tag
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