Oryzias melastigma (Indian medaka): 112163059
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Entry
112163059 CDS
T07439
Name
(RefSeq) chondroitin sulfate proteoglycan 5
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oml00535
]
112163059
Proteoglycans [BR:
oml00535
]
Cell surface proteoglycans
Others
112163059
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Ortholog
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GFIT
Motif
Pfam:
Neural_ProG_Cyt
Cadherin_C_2
ActD
PIRT
Motif
Other DBs
NCBI-GeneID:
112163059
NCBI-ProteinID:
XP_036070157
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Position
LG11:9773988..9789102
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AA seq
479 aa
AA seq
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MARRDARLWSWQVLLTISMVITSLSAHGRHSFVKRHHHHNHSSVNKEALDTRMVLSDDSA
EKDHLIGAGNSARLPLHSTRHHRSHKHHYLDFAEDDAPVAEELTAGGGPDAPGNSLSDDV
ITVEFHSPAPDVVPSDVALDWAKAPKPQKQKSGDPTQWGLSDFYDDNLSALGSTPVPEPS
PSPPADVDDENPLLPGTPAVFNKVRPKVNSGSSPPAGPIPSPDQDQGLGIGGAMGADGCR
LGFVLSGPGVCVAQCDIEPNFCFNGGVCTVVAGMGAFCRCNVQDYIWNKGTRCEWAVTEF
QVLCVVVGVACIVFLMLFMIIVFFAKRLYQLKNENRRLCKRSKYRTQSSEPQTDGLSVST
TADSSQPNVRKLCDTPPPAPQAHTHNLAYYDNIICQRPPTASFTWEHKHRNPYNHFQDEP
QKKDNQAKALPSKEEGSMNILNSHSPKHENNRPASIIHGNTPNSTEENAEVNKLQNNLV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcagggacgctcgtttgtggagctggcaggtgcttttgaccatctccatggtc
atcacctccctgtctgctcacggaagacattcatttgtcaagcgccatcatcaccacaac
cactcgtccgtcaacaaggaggccttggacaccaggatggttctcagtgatgactcggca
gaaaaggaccacctcattggagcgggaaacagtgcaagactcccactccattccaccaga
catcaccgctcccataaacaccattacctagattttgcagaagatgacgcacctgtggca
gaagagctaaccgctggagggggaccagatgcgcctgggaattccttatccgacgacgtg
atcaccgttgagtttcatagccccgcaccagacgttgtgccctctgatgtcgctctggat
tgggcaaaagcccccaaaccacaaaagcagaaaagtggcgaccccacccaatggggactg
tctgacttttatgacgacaatctctctgcattaggttcaactcccgtacccgaacctagc
ccttcacctccagctgacgtggacgacgagaacccactcctgcccggcaccccggcagtc
tttaataaagtgagaccaaaagtgaactctggatcatctccacctgccggtcccataccg
agcccagatcaagaccagggtttaggcatcggtggagccatgggtgcagacggctgtagg
ctgggatttgtactttctggacctggagtttgtgtcgctcagtgcgacattgagcctaat
ttctgcttcaacggaggagtgtgcaccgtagtggcagggatgggagccttctgcaggtgc
aacgtgcaggattatatctggaacaaaggcacgcgctgcgaatgggccgtcacagagttc
caggtgttgtgcgtggtggtgggcgtggcctgtatcgtgttccttatgctcttcatgatc
atcgtgtttttcgcaaaaagactttatcaactcaagaatgagaacaggcgcctttgcaaa
cgcagtaagtaccgcacacagagcagcgagccacagacggatggcctctccgtttcaaca
acggcggacagctctcaaccaaatgtaaggaaactctgtgacacccccccgcctgcaccc
caagctcatactcacaacctggcgtactatgacaacattatctgtcagaggccaccgaca
gccagctttacctgggagcataagcacagaaacccttataaccactttcaggatgagcca
cagaagaaggacaaccaagccaaggctcttccatccaaggaagagggctctatgaacatc
ctcaactctcattctccaaagcacgagaacaaccgccctgcttccatcatccatggaaac
acccccaacagcacggaggagaatgctgaggtaaacaagctccagaacaacctggtgtaa
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