Oryzias melastigma (Indian medaka): 112163073
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Entry
112163073 CDS
T07439
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF2
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112163073
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112163073
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112163073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
PHD_2
zf-RING_2
Rad60-SLD
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
112163073
NCBI-ProteinID:
XP_024154970
Ensembl:
ENSOMEG00000003365
LinkDB
All DBs
Position
LG12:complement(12690094..12714985)
Genome browser
AA seq
906 aa
AA seq
DB search
MWIQVRTIDGKETRTVEDLSRLTKIESLRLKIQDIFKVNPQQQRLFYRGKQMEDGQTLFD
YNVGLNDIVQLLIRSQTDPPDSPTHKDCSAITGSSAPLSDSKDQSCDPLAPLSPSDMETS
PSGDEEEEVSITTSTVNETKPDTSDSSSTKNGFSPVQDSQSPTSSKNTLIDPGIGLYKIN
ELVDCRDVSIGAWFEASIENVTLTPTKGKVGRPPKRTILKAEPEQTQAQDLSKDTCRTSA
VLNTESNGASTSQTDSSPTGNKGREENVIYHIKYEDYPENGVVQMGAIDVRPRARTVLRW
DELQVGMRVMVNYNMETADERGFWFDGEIVTLNQTSRTNKELRVNILLGGPGDVIPDCKI
QFLDEIYQVEKPGARPLSAVDGQFKRKSGPECKHCKADPDSECRFCSCCVCGGKQDASMQ
LLCDECNMAFHIYCLNPPLTTIPDDEDWYCPTCKNDTSEVVKAGEKLKASKKKARMPSAT
TESQRDWGKGMACVGRTKECTIVPSNHYGPIPGVPVGTTWKFRVQVSEAGVHRPHVGGIH
GRSNDGSYSLVLAGGFEDEVDRGDEFTYTGSGGRDLSGNKRIGEHSFDQTLTHMNRALAL
NCDAPLNDKDGAESRNWRAGKPVRVVRSSKGRRISKYAPEEGNRYDGIYKVVKYWPEIGK
CGYLVWRYLLRRDDLEPAPWTPEGLERIQKLGLVVQYPPGYLAAMANKTKKEACARPGRG
GRSKHYSCRGRPRRRKIKERQLSDEEEDEEEEPIEADMQEDTHQSNGEQKTNGDNELPAE
ADPPSKRVKIEETFQLTEQQQQLIQEDTANKKLWDEAMEHLKEGPNFLQKMEQIFMCVCC
QELAFQPVTTVCSHNVCKTCLQRSFRAQVYTCPACRHDLGKDYVMIQNKALQVLLDQFFP
GYSKGR
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccaggttcgcaccatagacggcaaggagacgcgaaccgttgaagatctttct
agattgaccaaaattgagtctttacggttgaaaatacaggatatttttaaggtgaacccg
cagcagcagcgcctcttctaccgtgggaaacagatggaagatggtcagactctttttgac
tacaacgtgggtctgaatgacattgtccagctgctgattcgctctcagaccgaccctcca
gacagccccacccacaaggactgctcagctatcaccgggagttctgcccctctgtccgac
tccaaagaccagagctgcgaccctttggctcccctctccccatccgacatggagacttcc
cccagcggggacgaggaggaggaggtcagcatcactaccagcactgtcaatgaaaccaag
ccggacaccagcgactccagcagcaccaaaaacggcttcagccctgtacaggactcccag
tcgcccacgtccagcaaaaacacactaattgacccagggattggattgtacaagatcaat
gaactggtggactgcagagacgtgagcattggcgcctggtttgaagctagcatcgaaaat
gtgacactaactcccactaagggtaaggtgggtcgccccccaaaacggaccatcttgaaa
gcagaacccgaacagacccaagcccaggatctaagcaaggacacttgcaggactagtgct
gtgttaaacactgagagtaacggagcctccacctcacagacagactcgtcaccgacaggc
aacaaggggagagaggagaacgtcatttaccacattaagtatgaagactatccggagaat
ggcgtggtccagatgggagcaatagatgtacgaccacgagccaggaccgtgctgcggtgg
gacgagctccaagtcggcatgcgtgtgatggtcaactacaacatggaaacagcagatgag
agggggttctggttcgacggagagatcgtgaccctgaatcaaacatcccgcactaacaaa
gagctccgagtcaatatcctcctggggggtcctggagatgtaatcccagactgtaaaatc
cagtttctagatgaaatctaccaggtggagaaaccaggagctcgtccgctctcagctgtg
gatggacagtttaaacggaagagcggtccggagtgcaaacactgcaaggccgatcccgac
tccgaatgccgcttctgctcctgctgcgtgtgcggggggaagcaggatgcctccatgcag
ctgctgtgcgacgagtgcaacatggcgttccacatctactgcctcaacccgcccctcacc
accatcccagatgatgaggactggtattgtcctacctgtaaaaatgataccagtgaagtc
gtcaaggccggcgagaaacttaaagcaagcaagaagaaagccagaatgccttcagcgacg
accgagagtcaaagagactggggaaagggtatggcctgtgtggggcgcactaaagaatgc
acaattgttccttcaaaccactatggaccaattcctggagtccctgtgggaaccacgtgg
aagttcagagtgcaggtgagcgaggcaggtgttcataggccccatgtcggcggcatccac
gggcgcagcaatgatggctcctactcgctggtgttggctggcggctttgaggatgaagtg
gacaggggagatgagttcacctacacaggcagcggaggtcgtgacctctcaggaaacaaa
cgaatcggagagcacagttttgaccaaacgctgactcacatgaaccgagcattggcttta
aactgtgatgcacctttgaacgacaaagatggagcggagtccaggaactggcgggcagga
aaacccgtgagagtggtgcgtagctccaagggtcgacgcatcagcaagtatgctccggag
gaaggaaaccgctatgatggtatttacaaggtggtgaagtactggccggagatcggaaag
tgtggctatttggtttggcgttacctgttgagacgggatgacttggaaccagcaccgtgg
acacctgaagggttggagagaatccaaaaactgggccttgttgttcagtacccaccaggc
tacttggctgccatggctaacaaaacaaagaaggaggcctgcgctaggcccggccgcggt
ggacgcagcaagcactattcttgtcgggggaggccacggagacgaaagatcaaggagaga
cagctgagtgatgaggaggaagacgaagaggaggagcccatagaagcagatatgcaagag
gatacgcatcaaagtaatggagagcagaagacaaacggagataatgaattgccagcagag
gcagaccctccatccaaacgagttaaaatagaggagacctttcagcttacggagcagcag
cagcagctgatccaagaggacacggccaacaagaaactctgggacgaagccatggagcac
ctcaaagaggggccgaatttcctgcagaagatggagcagatcttcatgtgtgtgtgctgc
caggagctggccttccagccagtcactactgtctgctcacacaacgtttgcaagacctgc
ctccagcggtcgttccgcgctcaagtgtacacctgccccgcctgccgccacgacctgggc
aaagactatgtgatgatccaaaacaaggccctgcaggttctcctggaccagttctttccc
ggctacagcaaaggccgatga
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