Oryzias melastigma (Indian medaka): 112163135
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Entry
112163135 CDS
T07439
Symbol
fcho2
Name
(RefSeq) F-BAR domain only protein 2 isoform X1
KO
K20042
F-BAR domain only protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112163135 (fcho2)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112163135 (fcho2)
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
112163135 (fcho2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
muHD
GMIP-like_FCH
FCH
Adap_comp_sub
DUF1664
DUF5926
DIL
Beta-prop_WDR75_2nd
RhoGEF
Motif
Other DBs
NCBI-GeneID:
112163135
NCBI-ProteinID:
XP_024155105
Ensembl:
ENSOMEG00000014430
LinkDB
All DBs
Position
LG12:5230522..5287641
Genome browser
AA seq
1006 aa
AA seq
DB search
MITPYFLENFWGEKNNGFDVLYHNMKHGQISTKELTDFIRERSTIEEAYARSMTKLAKTA
GNFSQLGTFAPVWDVFKSSTEKQAGCHMDLARKLQELIKEVQKYIEEQAKAHKKTKEEVA
PTLEAVQNIQTISQSLQKSKENYNAKTVEQERLRKEGATQRDVDKAGVKAKKATEAYKSY
VEKYANAKSEFEQKMAETAQKFQDIEENHILQLKEIIRSYSEYVEETHVQIGEVHKEFVR
NIENTSVESLIQKLSESKGTGKERPGPIEFEECNAAVATEGAKPRKRIPFGIPGRRKDKD
TDSTESTEVEANNTANGAPPGYYGSIDIQNANVPQVDAEGFCIRPEVNENDAKDNSFYSS
SDSDDEDEPRKFHVQIKPVQPNNGTHHNRANIDELKASIGNIILSPSTSGQMRRNQSSDE
LAKSRGPTSYELTNNDLLSLDPLSPPQLGGASYASADLASISLSISSSFLTNDSDVFLPE
AAVDSAPQQERPPHQAECLLSKEVSSFSSSSSSPWQSPEAPFQALKPAPARAQSAPTTRP
TEPIDPVKSPGAASPPKSADTVTASSWSQSQWTAFSDNFAPARHLSSSVKELQPLRSGSS
RTSSLLCDDAASCREAGPLCVTDVSSDRPMAAGPSGKLMNVPVPNRPITPLATGALMPPP
RPSSRPKLPTAKLTGINEIGRPFSPPKTSSASPPPTAPLARAESSSSLSSNASLSAANTP
TVGTSRGPSPVTLASQDALPIAVAFTESVNAYFKGADPTKCIVKITGDMTLSFPMGIIKV
FTSNPSPAVLTFKLKNASRLEQILPNVQLLHSDPSQSDSDSKSFWFNMQALTSYLRKSSE
QNPSASYYNVDILKYQVQSDGIHSTPLNLAVYWKCTPSTTDLRVDYRYNPESMDSPGSLT
NVQVLVPVDGGVTNVQSLPNSIWSSEQNKCLWKLSDLSSKSENEGAGSIRAKFDLSNGPS
NPSTLAVQFMSEGSTLSGVDMELQGSGYRLSLSKKRFATGRYMADC
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgataacgccctacttcctagagaatttctggggggaaaagaataatggcttcgacgtg
ctctatcacaacatgaagcatggccagatttccacaaaggagctgacagacttcatcaga
gagaggagtactatcgaagaagcctacgccaggtccatgaccaaacttgccaaaacagct
ggaaacttttctcaactcggcacattcgctccagtgtgggatgttttcaagagctcgaca
gagaaacaggccggatgtcacatggacttagcgaggaaactgcaggagctcatcaaagaa
gttcagaagtacattgaagagcaggccaaagcacacaagaagacgaaagaagaggtggca
ccgaccctggaagccgtccagaacatccagaccatctcacagagccttcaaaagtccaag
gagaactacaacgccaaaactgtggagcaggagcgcctccgcaaagagggggccacccag
agagacgtggacaaggctggagtgaaagccaaaaaagccacagaggcctacaaatcctac
gtggagaaatatgccaacgccaagtctgagtttgagcagaagatggctgaaaccgcacag
aaattccaagacatcgaagaaaaccacattctgcagctgaaggagatcatccgctcgtac
tcggagtacgtggaggaaacacatgttcagatcggagaggttcacaaagaatttgtgagg
aatatcgagaacacgtcggtagaaagcctcattcagaaactatctgagagcaaaggaacg
gggaaggagaggccagggcccatcgagtttgaagagtgcaatgcagccgtcgcaacagaa
ggtgccaaaccaagaaaaagaattccatttggaatcccaggccgaaggaaagacaaagac
acggattccacggagtccacagaagttgaagctaataacactgctaatggtgctccccct
ggatattacgggtctatagacatccagaacgctaacgttcctcaggttgatgcggagggt
ttctgtatcagaccagaagtcaacgaaaatgatgccaaagataattccttttactcctca
agcgactccgacgacgaggacgagcccaggaagttccacgttcagattaaacccgtccag
cccaacaacggcacgcaccacaaccgggcgaacatcgacgagctgaaagcttccatcgga
aacatcatcctgtctccttcgacctcggggcagatgaggaggaaccagtccagtgatgaa
ctcgccaagtccagagggccaacatcctacgaactaactaataacgacctcctgtctctg
gacccgctgagcccgcctcagctcggcggagcctcctacgcgtcagcagaccttgcctct
atctccctttcaatctcttcatcttttctgacgaatgactctgacgtcttcctgccagag
gccgcagttgactcggcgccgcagcaggagcgccctccccatcaggcagagtgtctgctc
tccaaagaagtctcctctttctcttcatcctcctcctcaccctggcagtcaccagaggcg
ccgtttcaagctctcaaacccgccccagcgcgagctcagagtgcccccaccacccgtccc
actgagccaatagaccccgtgaaaagccccggcgccgccagccctccgaagagcgccgac
accgtcacggcttcgtcctggtcccagagccagtggacggcgttcagcgacaactttgct
ccggcgcgtcacctgagctcatctgtgaaggagctccagccgctgcgttcaggctccagc
aggaccagcagccttctgtgtgatgatgcagcgtcgtgccgagaggccggccccctctgt
gtcactgatgtctcctctgataggccgatggctgcaggcccgtcagggaaactgatgaac
gtgccagtaccaaaccgacccataacacccctggcaaccggagccctcatgcccccaccc
cgaccctcatccaggcccaaacttcccaccgcaaaactcacaggaatcaatgaaatcgga
cgccctttcagcccgccgaaaacatccagcgccagccctcccccgacagcgccgctcgcc
cgagcagagagttcgtcctctctatcctcgaacgcatcgctcagtgccgcaaacaccccc
actgttggaacgtctcgcggtcccagccctgtgaccctggcatcccaagatgccttgccc
attgccgtggccttcacagagtcagttaatgcctacttcaaaggagctgatcccacaaag
tgcattgtgaagatcacaggagacatgacgctctcctttcccatgggcatcatcaaggtc
ttcacgtccaacccgtcccccgccgtcctcaccttcaaactgaagaacgccagccggctg
gagcagatcctccccaacgtgcagctactccacagtgatccttcccaaagtgattcagat
tccaagagtttctggttcaacatgcaagcactgacgtcctacctcagaaaatcctcggag
cagaacccctcagcttcctactacaacgtggacatcctgaagtaccaggtgcagtctgat
ggaatccattccaccccgctcaacctggctgtgtactggaagtgtacaccgagcacaacg
gacctgcgggtggattaccgctacaacccagaatccatggactccccggggtcgctcacc
aacgtacaggtcttggtccctgtagacggaggagtcactaacgtgcaatctctgcccaac
tccatatggagttcagagcagaataagtgtctctggaagctgagcgacctctccagtaaa
tctgaaaatgaaggtgcggggtctatacgggctaaatttgacctctcaaacgggccgtcc
aacccgtccactctggcagtccagttcatgagcgagggctccaccctgtctggagtggac
atggagctgcagggctcgggatacaggctctccctcagcaagaaacgatttgccaccggg
cgctacatggcggactgctaa
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