Oryzias melastigma (Indian medaka): 112163183
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Entry
112163183 CDS
T07439
Symbol
clip1b
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112163183 (clip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112163183 (clip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112163183 (clip1b)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112163183 (clip1b)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
112163183 (clip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
112163183
NCBI-ProteinID:
XP_024155199
LinkDB
All DBs
Position
LG12:complement(2245448..2275351)
Genome browser
AA seq
914 aa
AA seq
DB search
MDKQGSTSKASGLKPPSKIVRPSGVPQRTSPSSNASKTLPPEKPPSTGVTSPTQDANPDF
QTGDRVWVNGNKPGYVQFVGGTQFAPGQWAGVVLDEPIGKNDGSVAGVRYFQCEDGRGIF
TRPSKLSRTALPEKEENARQPSPAQGGAATNESAPAGSGSAAQGAGVKLSALHRMAASTE
SVSNTSDPDSLKKSRRELRLGDRVLVGGTKAGVVRFLGETDFAKGDWCGVELDEPLGKND
GAVAGTRYFQCLPRFGLFAPVHKVTRIGFPCTTPTKALRSGRRSTLKRSPSASSISSISS
ATSSISGKPSRAGLLTETSARYARKISGTTALQEALKEKQQHIEQLLAERDLERCEVAKA
TSHAGEVQQEMVLLRKGREQYAVEMEAKLDQLRSLVEAADRDKVELLNQLEEEKRKVEDL
QFRVEEACITRGDLETQTRLEHAHIKELEQSLLFEKTKAEKLQRDLEDARVATVSERSRI
MELEREVADLQLRLRASQQKEDAASLSQQQIGSLTSQVQAQEKKISELSVDLESKQKELQ
AVQKDKNSLEELLSSLRQKLQVQEEEIRQAARKAEGLERSKKELETQKEESQTRETELRG
QLTQAQERSEKAGESLTQLTEEKKNLEMELEALKQQNSKYQEELQVSKERSSSENQRIGV
LCKEIEELKLASHKHHREHNEEQNCQQTDMKTRGILSSRDSERDVNFQTSTAGSDKDREL
EILRNEIEVLRGENAMTKTLQSAVETLEKDKAQLQGRVRSLEQRLMGTQGSEGEECEAPS
SGDAALQRLREEKEFAEGQINFLNSVIVDLQRKNEELKIKLKKLALAEFNGNDGTDGLGE
GVPKREKKATPRLFCDICDCFDLHDTEDCPTQAQSPDSVPHSTYRGNPANERPYCDICEA
FGHATESCNDDQTF
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacagggatccaccagtaaagccagcgggctgaaacctcccagcaaaatagtc
cgaccgtctggagttccacagagaacgtcgccgtcatccaacgcttcaaagacccttcct
cctgagaaacccccctccaccggcgtgacatccccaactcaggatgccaatcccgacttt
cagaccggagaccgggtctgggtcaacggcaacaagcccggctacgttcagtttgttgga
ggcacgcagttcgcgcccggccagtgggcgggcgtcgtgctggacgagccgatcgggaag
aacgacgggtcggtggcaggcgtccggtacttccagtgtgaggatgggcggggcatcttc
accagaccctccaaactgtccagaactgcactgccggagaaagaggagaacgcgaggcag
cccagccccgctcaaggcggcgccgccaccaacgagtcggcgccagctggctccggctca
gcggctcagggagccggcgtaaagttgagcgctctacaccggatggcggcctccacggag
tccgtgtccaacacatccgacccagactccctgaagaagagcaggcgggagctgcggctg
ggagaccgcgtgctggttggcggcaccaaggcgggagtggtgcgcttcctcggggagacg
gacttcgccaaaggagactggtgtggagtggaactggacgaacctctgggcaagaatgac
ggcgccgtcgccgggaccaggtacttccagtgtttgccgcggttcggcctgtttgcgccg
gtccacaaggtgacgcggatcggtttcccctgcaccacccccaccaaggccctgaggtcg
gggaggagatccacgctcaagaggagccccagcgcctcctccatcagctccatcagctcc
gccacctcctccatcagcggcaaacccagccgggcgggactgctcacagagacgtcggcc
cgatatgcccgtaagatttcgggcaccacggcgctgcaggaggccctgaaggagaagcag
cagcacatcgagcagctgctggccgagagggacctggagcggtgcgaggtcgccaaagcc
accagccacgccggggaggtgcagcaggagatggtcctgctgaggaaaggccgggaacag
tatgccgtggagatggaggccaagctggatcagctgcgctcgctggtggaggcagcagat
cgggacaaggtggagctgctcaaccagctggaggaggagaagaggaaggtggaggacctg
cagtttcgggtggaggaggcctgcatcaccagaggagacctggagacgcagaccaggctg
gagcatgcccacataaaggagctcgagcagagtctgctctttgaaaagaccaaagctgaa
aaactccagagggatttagaggacgctagggtggcgaccgtgtcggagcgctccaggatc
atggagctggagcgggaggtggccgacctgcagctccgtctgcgggcgtcccagcagaag
gaggacgccgcgtctctgtcgcagcagcagatcggcagcctgacctcccaggtgcaggcg
caggagaaaaagatcagtgagctgagcgtggacctggagagcaaacagaaagagcttcag
gctgtgcagaaagacaagaactctctggaggagctgctgtccagcctgaggcagaagctg
caggtccaggaggaggagatccggcaggcggcgaggaaggctgaagggctggaacgctca
aagaaggagctggaaacccagaaggaggagagtcagaccagagagacggagctgagagga
cagctgacacaggctcaggagaggtcagagaaggcgggtgagtcgctcacgcagctgacc
gaggagaagaagaacctggagatggagctggaggctctgaaacagcagaactccaaatac
caggaggagctccaagtgtccaaggagcggagcagctcggagaaccagcggatcggagtc
ctctgcaaggagattgaagagctgaagctggcctcccacaagcaccaccgcgagcacaac
gaggagcagaactgtcagcagacagacatgaagaccagaggaatcctctccagccgagac
tcagaaagagacgtgaacttccagacgtccacggcaggctcggacaaagacagggagctg
gagattcttcggaatgagatcgaggttctgcgaggagagaacgccatgaccaagacgctg
cagtcggccgtggagacgctggagaaggacaaagcgcagctgcagggccgtgtccgcagc
ttagagcaaaggctgatgggaactcagggctccgagggagaggaatgtgaagctccatcc
tcaggtgatgcggcgctgcagcggctgagggaggagaaggagttcgccgaaggacagatc
aacttcctgaacagcgtcatcgtcgacctgcagcggaaaaacgaggagctgaagatcaaa
ctgaagaagctcgctctggccgagttcaatggaaacgacggaacggacgggctcggcgag
ggcgtaccgaagcgtgagaagaaggcgacgccgcgcctgttctgcgacatctgcgactgc
ttcgacctccacgacaccgaggactgcccaactcaggcgcagagccccgactccgtccct
cactccacgtaccgcggaaaccccgccaacgagaggccctactgcgacatctgcgaggcc
ttcggtcacgccaccgagtcctgcaacgatgaccagaccttttga
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