Oryzias melastigma (Indian medaka): 112163243
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Entry
112163243 CDS
T07439
Symbol
rnf165a
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF165
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112163243 (rnf165a)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112163243 (rnf165a)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112163243 (rnf165a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
U-box_ZFPL1
zf-ANAPC11
zf-RING_16
zf-RING_Vps41
RINGv
Prok-RING_4
zf-Nse
zf-RING_10
zf-RING-like
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
112163243
NCBI-ProteinID:
XP_036070442
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All DBs
Position
LG12:8492814..8509063
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AA seq
343 aa
AA seq
DB search
MVLVHVGYLVLPDFSSVRNRGVHFSRHQHSHATSCRHFHLGAPQAPITSEFSLGTASQPP
QTGLAAHLSPTHHLTALLAPPQFQDVPSWPSFLPQALHQQYLIQQQLLEAQHRRILPHSR
RTQDRVPQNHRLRSGYEYSPPLHVPPPISQQPRYLAEGTDWDLSVDAGLPHQYQLQQLPQ
HYQHYLVSPRMHHFPRNSSSSQLVVHEIRNYPYPQLHLLAFQSLNPSRHATAVRESYEEL
LQLEDRLGSVSRGAVQTTIERFTFPHKYKKRKPLQLKIGEEEEETDVDEKCTICLSMLED
GEDVRRLPCMHLFHQGCVDQWLATSRKCPICRVDIETQLSPDS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagtccatgttggatacctggttctccccgacttcagctcagttagaaataga
ggcgtgcacttcagcaggcatcagcacagtcatgcaacctcctgccgacactttcacctg
ggcgctccacaggcacccatcacatctgagttttctctgggaactgccagccagccccca
cagacaggcctggccgcccacctgtcccccacacaccacctcactgccctactcgcaccc
cctcagtttcaggatgtgccctcgtggccctcattcctacctcaggccttgcaccagcaa
tacctcatccagcagcagctcctggaggcgcagcaccgcaggatcctcccgcactccaga
agaacacaggatcgggttcctcagaaccacagactgcgatcaggctatgaatactcccct
ccgctccatgtccccccaccaatatctcaacagccacggtacttggcagaaggcaccgac
tgggatctcagcgtagatgccgggcttcctcatcagtaccagcttcagcagcttcctcag
cactatcagcattatttggtctcccctcgaatgcaccacttccccaggaactcttcctct
tctcaactggttgtccatgaaatccgaaactacccgtacccacagctgcatctgttggct
tttcaaagtctgaatccctcgaggcatgccactgctgtgcgggaaagttacgaggagctt
ttgcagctggaggaccgacttggaagtgtcagcagaggagctgtacagacaaccatcgag
agattcacatttcctcacaagtataagaagagaaagcccctgcagctgaagattggtgaa
gaagaggaggaaacagatgtggatgaaaagtgtaccatctgtttgtccatgctggaggat
ggagaggacgtcaggagacttccctgcatgcacctcttccaccagggctgcgtggaccag
tggttggccaccagcaggaagtgtccaatctgtcgagttgacatcgaaacacagctgagc
cccgacagctga
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