Oryzias melastigma (Indian medaka): 112163276
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Entry
112163276 CDS
T07439
Symbol
ppwd1
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112163276 (ppwd1)
03110 Chaperones and folding catalysts [BR:
oml03110
]
112163276 (ppwd1)
Enzymes [BR:
oml01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
112163276 (ppwd1)
Spliceosome [BR:
oml03041
]
Complex C
Other components
PPlases
112163276 (ppwd1)
Chaperones and folding catalysts [BR:
oml03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
112163276 (ppwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
112163276
NCBI-ProteinID:
XP_024155359
Ensembl:
ENSOMEG00000017997
UniProt:
A0A3B3DR30
LinkDB
All DBs
Position
LG12:2805395..2810378
Genome browser
AA seq
626 aa
AA seq
DB search
MAESENSVDLKRKAEDSQDGDGEQQDSEWVGPMPSEATKTKKRKVLEYERVYLDNLPSAA
MYERSYMHRDIITHLVCTKTDFVITASQDGHVKFWKKKEDEGIEFVKHFRSHLGVIESIA
VSAEGALLCSVGDDRAMKVFDVVNFDMINMLKLGFHPGQSEWIYNPGDAICTVACSEKST
GKIFVYDGRGSSEPLHVFDKLHSSPLTQIRLNPKFRVIVSADKAGMLEYWTGLPNEFRFP
KHVQWEYKTDTDLYEFAKNKTYPTSLAFSPDGKRMATIASDRKVRIFRFLTGKLARVFDE
SLTMFTELQQMRQQLPDMEFGRRMAVERELEKVDGVRLANIIFDETGHFVLYGTMLGIKV
INVETNRCVRILGKLENIRVLHLSLFQGVAKAMQVAPTVEMKASDNPALENVEPDPTIFC
TAFKKNRFYMFTKREPEDTKSADSDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTTM
GDIHIKLFPVECPKTVENFCVHSRNGYYNGHIFHRVIKGFMIQTGDPTGTGMGGESIWGG
EFEDEFHSTLRHDRPYTLSMANGGPGTNGSQFFITVVPTPWLDNKHTVFGRCIKGMEAVQ
RISNSKVNPKTDKPYEDISIINITVK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatctgaaaacagtgtggatctgaagcgaaaagctgaagatagccaggatgga
gatggagaacaacaagattcggaatgggtcggacccatgccgagtgaagccacgaagact
aagaaacggaaagtactcgaatacgagcgtgtttacctggacaacctgccctcggctgcc
atgtatgaacggagctacatgcacagagacattattacgcatttagtttgtaccaaaaca
gactttgtcataaccgccagtcaagacggccacgttaagttttggaaaaagaaagaggac
gagggtatcgagtttgtgaaacacttcagaagccacttaggtgtgatcgagagcatcgcc
gtcagcgctgaaggagccctcctctgctccgtcggcgacgatcgggccatgaaagtgttc
gatgtggtcaactttgacatgatcaacatgctgaagctgggctttcaccccggacagagt
gagtggatctacaaccccggggacgccatctgcactgtggcgtgctctgaaaaatccaca
ggaaagatctttgtgtacgacgggcggggaagcagcgagccccttcacgtctttgacaaa
ctgcactcctccccgctgacgcagatccgcttgaatcctaaattcagagttattgtgtct
gccgacaaagcgggaatgctggaatactggacaggccttcccaacgagttcaggtttccc
aagcacgtgcagtgggagtacaaaaccgacacggacttgtatgaatttgcaaaaaacaaa
acctatcccaccagcctggccttctcgcctgacgggaaaagaatggccaccatcgcctcg
gacaggaaagtgaggatcttccgcttcctaacaggaaagctggcgagagtgttcgatgag
tccttaacgatgttcacagagttgcagcagatgaggcagcagctgcctgacatggagttt
gggaggcggatggccgtggagagagagctggagaaggtggacggagtccggctggctaac
atcatctttgacgagaccggccactttgttctgtacggaaccatgctgggcatcaaagtc
atcaatgtggagaccaacagatgtgtgcggatcctggggaagctggagaacatccgcgtg
cttcacctcagtctcttccagggagtggccaaggccatgcaggtggcccccacggtggag
atgaaggcctccgacaaccccgccctggagaacgtggagcccgaccccaccatcttctgc
acggcctttaagaagaatcgcttctacatgttcacgaaacgagaaccggaggacacgaag
agcgccgactcggacagagacgtcttcaacgagaagccgtccaaggaggaggtgatggca
gccactcaggccgagggccctaagagggtgtccgacagcgccatcatccacaccaccatg
ggggacatccacatcaagcttttccctgtggaatgcccgaaaacggtggagaacttctgc
gttcacagcagaaacggatactacaacggccacattttccacagagtcatcaagggcttc
atgattcagaccggagacccgaccggcaccggcatgggaggcgagagcatctggggagga
gagttcgaggacgagtttcactccacgctgagacacgaccgtccgtacactctcagcatg
gccaacggcggacccggcaccaacggctcgcagttcttcatcaccgtcgttcccactccc
tggctggataacaaacacaccgtgttcggacgctgcatcaaaggcatggaggcggtccag
aggatctccaactccaaggtcaaccccaaaaccgacaagccctacgaggacatcagcatc
atcaacatcaccgtcaagtga
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