Oryzias melastigma (Indian medaka): 112163290
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Entry
112163290 CDS
T07439
Symbol
fubp3
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112163290 (fubp3)
03041 Spliceosome [BR:
oml03041
]
112163290 (fubp3)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112163290 (fubp3)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112163290 (fubp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
112163290
NCBI-ProteinID:
XP_024155376
Ensembl:
ENSOMEG00000004190
UniProt:
A0A3B3BCD4
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Position
LG12:12036116..12061161
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AA seq
557 aa
AA seq
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MMMMAELIQGQASVAQPGTKDDFADMIRRVRQVAAKMGGDQMPNMNSSAVIDPSLYGFVS
QNRSLDNGVGNHLGAMVHQRALTTEDFKVPDKMVGFIIGKGGEQISRIQQESGCKIQIAS
DSGGMLDRPCTLTGSPENIEQAKRLLSEIIEQCRYGPGFHNDMDGNGSIQQMLIPANKVG
LVIGKGGETIKQLQERTGVQMMMIQDDPMPTGADKPLRITGDPLKVQQARELVVKLIRDK
DQGDFRAGRAEFGSKMGGTSLDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDGI
SPDRVAQVMGQPEHCHHAVHLINELVQTAQERDGYGVMGRRGRVDCNTGGPGGLQEVTYA
VPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPSTDPNVRIFSIRGTPQQLEKARQL
IDERIGGPGIGGNSNFSMNLYNQGPTTPPQHGPQPFMTGGWGTTFQIWQPQGQQDHNHNG
SQTGQMDWEQYYKKLGQQNQPQNSGPEYNKVWGQTAGPATQQTSNPDYNAWVDFYRQPMA
FFNQGSQQTQAPGLQDH
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcggagctgattcagggacaggcctcggtggctcagcctgggacgaaa
gatgattttgcagacatgatacgccgggtccgacaggtggccgccaaaatgggaggagac
cagatgcccaacatgaattcgtctgcagtcatagacccctccctctatggctttgttagc
caaaaccgttctcttgacaatggggttgggaaccatcttggtgcaatggtacatcaaagg
gctctaactacagaagacttcaaagtgcctgataagatggtgggatttattattggaaaa
ggaggggagcagatctctagaattcagcaggaatccggctgtaagatccagatcgcttca
gacagtggaggcatgttggatagaccctgcacactgactggaagcccagaaaacatcgag
caggccaagagactgctgagcgagatcatcgagcagtgtcggtatggtcccggcttccac
aacgacatggacgggaacggttccatccagcagatgctcatccctgccaacaaagttggc
ctggtcatcggcaaaggtggagagaccatcaaacaactgcaggagaggacaggtgtacag
atgatgatgattcaggacgaccccatgcccaccggagctgacaaacccctgagaatcacc
ggggatcctctcaaagtgcagcaagcccgtgaacttgtggtgaaactcatcagggacaaa
gaccaaggagacttcagggccggaagggcagaatttggatccaaaatgggtggaactagc
ctggatgttgtagtaccaagatttgcagttggcataatcatcggcaggaacggagagatg
atcaaaaaaattcaaaacgatgctggcgtccggatccagttcaaacaagatgacggaatc
agccctgaccgtgttgctcaagtgatgggccagcctgagcactgccaccacgccgttcac
ctcatcaacgaactggttcagaccgctcaagagcgagacggctatggggtgatggggcgt
cgaggacgggtcgactgtaacacaggaggacccggaggtcttcaagaagtcacatatgca
gttcctgctgacaagtgtggccttgttattgggaaaggtggagaaaccatcaagaacatc
aaagagcagtctcgtgctcacgtggagctgcagagaaacccgccgcccagcactgacccc
aatgtgcgcatcttctccatccgaggcaccccgcagcagttggagaaagcccgtcaactg
atcgatgagagaattgggggtccagggattgggggtaacagcaacttcagtatgaatctt
tacaaccaaggaccaaccactcctcctcaacatgggcctcagccgttcatgactggagga
tgggggacaacttttcagatctggcaacctcaaggccagcaggaccacaatcacaatgga
tcccagacgggccagatggactgggagcagtattataaaaagctaggtcagcaaaaccaa
ccccagaactctggtccggaatacaacaaagtgtggggccagacagccggtcctgccact
cagcagacttctaatcccgactataacgcctgggtcgacttctacagacagccgatggcc
ttcttcaaccagggctctcagcagacacaagctcctggtctccaggatcactaa
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