Oryzias melastigma (Indian medaka): 112163316
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Entry
112163316 CDS
T07439
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide a isoform X1
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112163316 (nefma)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
112163316 (nefma)
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Tup_N
Motif
Other DBs
NCBI-GeneID:
112163316
NCBI-ProteinID:
XP_024155424
Ensembl:
ENSOMEG00000021807
UniProt:
A0A3B3CQ47
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Position
LG12:complement(16913176..16918170)
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AA seq
866 aa
AA seq
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MSYPAETIGSPFRRVMETRTSSYGYGRPSGTPSSGFRSQSWSRGSPGSTLTASYKRSLNA
PVSRAYSSTVLSSADSVDYGQNSLLNGDYKRSNEKEQLQGLNDRFVVYIDKVHYLEQQNK
QIEDEIQALRQRQVSRSNLDDLYGQELQELRSMLEQIHHDKAQIQLDTDHIEEDVQRLRE
RFEEEARIREETEAIIRVLKKDANDSELVKSELEKKVQSLQDEIAFIRNNHEEEVSDLIA
QIQASQVSVERKDLQRADITEALREIRCELEGHSNQNLQQVENWFMCRYAKLTEAAEQNK
DAIKSARDEIADYRRQLQSKTVELESVRGTRDSLERQLSDIEDRHNSDLASLQETIHQLD
NELKSTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRQAVTSTKTA
KPKSEVSKLKVQHKFVEEIIEETRVEDEKADLDEALADIAHEISAEGEDEAGEEEEDGEE
GGEEEEVVASKAEVSASEPAKEEDGEDEGDAGEEGEKEEEEKGEDEEDKGDDAEEGDEDG
EEGQEGEEEVEETVLCSKASESKASPGDKEGSGGEEEEEEEAGSDKDEDAGSGKASKSED
EKEDADKDIKEDEKKSEKSEDKVEKTPTKSEAEKPEEKKEESKSEAPKSDSPKPSSPKSE
SPKPSSPKSESPKPSSPKSESPKPSSPKAESPKSGSPKAESPKSESPKPTSPKVESPKEG
SPKTASPNAESPKTETSKPEAPKEEKPDTKSDSKEDKPVEKKDVAMNGDVDKSSPEEKEK
KDEDKDVIANGVDESPVKEDGGQKVVITKTVETITTGEDGSKHVTKSVTVTETVKEVEEV
MQEKLVSTKKAEKHSTQSVKQVTEGD
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgagttacccggcggagacgataggaagccctttcaggagagttatggagacgagaact
tccagctacggttacggccgccccagcgggaccccgtccagcggcttccgctcccagtcc
tggtcccggggaagccccggctccactctgaccgcctcctacaaacggagcttgaacgcg
ccggtgtcccgcgcgtacagctccacggtgctcagctccgccgacagcgtcgactacggc
cagaactcgctcctgaacggcgactacaagagatcgaacgagaaggagcagctccagggg
ctgaacgaccgcttcgtagtctacatcgataaggtgcactacctggagcagcagaacaag
cagattgaggacgagattcaggcgctgcggcagaggcaggtgtcgcgctccaacttggat
gacctgtacggtcaggagctgcaggagctgcgctccatgctggagcagatccaccacgac
aaggcgcagatccagctggacaccgaccacatcgaggaggacgtccagcggctccgggaa
cgcttcgaggaggaagcccgcatccgcgaggagaccgaggccatcatccgcgtgctgaag
aaggacgccaacgactcggagttggtcaagtccgagttggagaagaaagttcagtcgctg
caggacgagatcgccttcatccgcaacaaccacgaggaggaggtgagcgacctgatagcg
cagatccaggcgtcccaggtgagcgtggagaggaaggacctccagagggctgacatcacc
gaggctctgcgggagatccgctgcgagctggagggtcactccaaccagaacctgcagcag
gtggagaactggttcatgtgccgctacgccaagctgacggaggctgcggagcagaacaag
gacgccatcaagtccgcccgggacgagatcgcagactaccgccgccagctgcagtccaag
acggtggagctggagtctgtgcgcgggaccagagactcgctggagaggcagctgagtgac
atcgaggaccgccacaacagcgacctggccagcctccaggaaacaattcaccaacttgac
aatgagctcaagagcaccaagtgggagatggctcgtcatctccgggagtaccaggacctg
ctcaatgtcaagatggccttggatattgagattgctgcatacaggaaactccttgaaggt
gaggagacccactttagcactttcccttaccgccaggcggtcacctccaccaaaaccgcc
aagccaaagtcggaggtctccaagctgaaggtgcagcacaagtttgtagaagagatcatc
gaggagacgagggtggaagacgaaaaggccgacctggacgaggcgctggcagacattgcg
catgagatctcagcagagggggaggatgaggctggagaggaggaggaagatggagaagag
ggaggggaggaagaggaagtggtggccagtaaagctgaagtcagcgccagcgaacctgcc
aaggaagaggatggagaagatgaaggggatgcgggtgaggagggggagaaggaggaagag
gaaaaaggagaggatgaggaagacaagggggatgatgcagaagagggcgatgaagatgga
gaagagggacaggaaggggaggaggaagttgaggagactgtcctttgctccaaagcatcc
gagtccaaagcttctcctggggacaaggagggaagtggaggagaggaggaggaagaggag
gaggcaggaagtgataaggatgaagatgcaggcagtggcaaagcatctaaaagcgaagac
gagaaagaggatgcagacaaggacataaaagaagatgagaagaaaagtgaaaaatcagaa
gataaagtggaaaaaactccaacaaagtcagaagctgaaaagcctgaagagaaaaaggaa
gaatcaaagtctgaagcacccaaatctgactctccaaaacctagttcccctaaatctgaa
tcaccaaaacctagttcccctaaatctgaatcaccaaaacctagttcccctaaatctgaa
tcaccaaaacctagttcccctaaagctgaatccccaaagtctggttcccctaaagctgaa
tctcctaaatctgaatctccaaaacccacttctccaaaggtagagtctcccaaagagggg
tcacctaaaactgcatccccaaacgccgaatctccaaaaacggagaccagcaagcctgag
gctcctaaagaagaaaagccagacaccaagagtgactccaaagaagacaaaccagtggaa
aagaaggatgttgccatgaacggcgacgtggacaagagcagccccgaggagaaggagaag
aaagatgaggacaaagacgtgatcgccaacggcgtggacgagagtcccgtcaaagaagac
ggcggtcagaaagtggtgatcaccaaaaccgtggagacaatcaccaccggagaggacggc
tccaagcacgtcaccaagtcggtcacagtgacagaaacggtcaaggaggtggaggaggtg
atgcaggagaagctggtctccaccaagaaggcggagaagcactccacccagtccgtcaag
caggtgacggagggcgactga
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