KEGG   Oryzias melastigma (Indian medaka): 112163402
Entry
112163402         CDS       T07439                                 
Name
(RefSeq) torsin-1A
  KO
K22990  torsin-1
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:oml03110]
    112163402
   04131 Membrane trafficking [BR:oml04131]
    112163402
Chaperones and folding catalysts [BR:oml03110]
 Other chaperones and cochaperones
  Others
   112163402
Membrane trafficking [BR:oml04131]
 SNARE
  SNARE associated proteins
   Others
    112163402
SSDB
Motif
Pfam: Torsin TOR1A_C AAA KAP_NTPase AAA_22 NPHP3_N AAA_16 TniB NACHT AAA_5 AAA_2 RNA_helicase ResIII Viral_helicase1 NB-ARC Cytidylate_kin ABC_tran Sigma54_activ_2 PhoH
Other DBs
NCBI-GeneID: 112163402
NCBI-ProteinID: XP_036070484
Ensembl: ENSOMEG00000013592
LinkDB
Position
LG12:complement(5709286..5720243)
AA seq 339 aa
MSMKKGQVLLLWVLVCPGVTGAIEPVCTASAVAVGYLIGNLPSYQDILCYFHECCQPEWI
SFNQTGLEADLENKLFGQHLASRIILKSLNEFMSNHNPEKPLVLSLHGPSGTGKSFVSQL
IAENIYTEGTNSKFVHFFNSLVHFPQPSLISTYKSQLQQRIKDSVSNCERSMFIFDEMDS
MHPGLIDSIKPFLDYHKVDGVSYKKSIFIFLSNAGEKSIVETALDFWRTGRDREDIELSD
LEESLSFSIFNNEKNGFFRSNLMKNNLVDFFVPFLPLEYSHVVQCIMAEMKIRASKGKGP
PNLDMARKVARELKYFPKTERAFSTTGCKIIQQKLNFYT
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgagtatgaagaagggacaagtcctgctgctttgggttctggtctgccccggtgttaca
ggcgccatagaacccgtctgtactgcctcagcagtggctgtggggtatctaattgggaat
ttaccgagctaccaggacattctctgctacttccatgagtgctgtcaaccagaatggata
agtttcaaccaaactggcttggaggcggatctggaaaacaaactgttcggacagcacctg
gcgtctcgcatcatcctgaaatccctgaacgaatttatgagcaaccacaatcctgagaag
ccgctggttctctcgctccatggcccgtcaggcaccgggaaaagctttgtcagccagctg
attgcagaaaacatttacacagaggggacgaacagcaagtttgtccattttttcaattct
ttagttcacttcccacaaccgagtctcatctccacctacaagtctcagctgcagcagagg
atcaaagacagcgtgagtaactgtgagcgctccatgttcatctttgatgagatggactca
atgcatccgggcctgatcgacagcattaagccgttcctggactaccataaggtggacgga
gtttcctacaagaaatcaatcttcatctttctaagtaacgctggagaaaagagcatcgtt
gagacggctttagatttctggagaacaggacgagatcgagaagacattgaactgtcagat
ctggaagaatctctctccttctccatcttcaacaacgaaaagaatggattttttcgctca
aatttgatgaaaaataacctggtggacttctttgttcccttcctccctctggagtattcg
cacgtcgtccagtgcatcatggctgagatgaagatcagagccagcaaggggaaaggcccg
ccaaacctggacatggcacgcaaggttgccagagaattgaaatatttccccaaaacagag
cgagctttttccaccacaggatgcaaaataatacagcagaaactgaacttctacacataa

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