Oryzias melastigma (Indian medaka): 112163405 Help Entry 112163405         CDS       T07439                                  Symbol vps50 Name (RefSeq) syndetin isoform X2   KO K23288   syndetin Organism oml  Oryzias melastigma (Indian medaka) Brite KEGG Orthology (KO) [BR:oml00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oml04131]     112163405 (vps50) Membrane trafficking [BR:oml04131]  Protein recycling   Others    EARP complex     112163405 (vps50) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps54_N Syndetin_C Motif Other DBs NCBI-GeneID:  112163405 NCBI-ProteinID:  XP_024155543 Ensembl:  ENSOMEG00000016711 LinkDB All DBs Position LG11:complement(9125158..9237288) Genome browser AA seq 962 aa AA seqDB search MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELRQQPIDPQAEQEIIDSIGEV YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKRVADLILEKQPSYVKELE RVTALQTNLQLAAVICTNARRQLNVAKAGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA LSKTCKHFDVLHYTKVQMAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHRTMQWHEEQDKQETTPTPDE SDELTVDRSYVKKKLEHGLSRIWQDVQLKVKSYILGTDMSNFKYDDFIVVLDVISRLMQV GEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNIAQLHE FKFMGQCRSPSMSPSRQAASSSYAAREELSLFQQFLQDGNPFEMHIEQKEEETEDVLASN GYESDELEKSVYQEYDSDSDVAEELKQDYVDEQTGDAPLKSVSRETIRSKRKSDYCLNKA NAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDMYES SGLGLISSRLRTTLNRIQESLIDMDPVGENAGVHGPTEDRKEKVPSPHLSQLVVLTNSET LYGLAQRVVATESLAFLAEQFESLQSHLDAMMPAAKKPFLQQFYSQTVSTASELRKPIYW IVAAKAIDYEQMLLMMAGVKWDIREIMSQHNIYVDVLLKEFEQFNKRLGEVSRQVRIPLP VSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPIPDKEF VETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAIDDIDRP KR NT seq 2889 nt NT seq  +upstreamnt  +downstreamnt atgcagaaaattaagtctcttatggcccgtcagggcctgaagagtcctcaagagagcatg gctgacctcagtcctgtggagaatctgagaatccccagcaaggaggagttacgggagctg agacagcagcccattgacccccaggccgaacaagaaatcattgacagcattggggaggtc tacttctccaacgactcctttgacatggtgcagcatgaactggagaaactcccgcctgag ctgaacttacaggagctggaagagtatagagataagctgaagagacaacaagcagcagtt tctaaaagggttgccgatctcattctggagaaacagccttcctatgttaaggagctagag agggtgacggcattacagaccaacctgcagctggcagcagtgatttgcactaacgcaaga aggcaactcaatgtggcgaaagcagggtttacagaggccagcctgggtctgctagccaat cagaggaggcgacaactgctgacaggcctgctcaaatctctgaggaccatcaagaccttg caaagaacagatgtaagactgagtgagatgctggaggaggaagactatccaggtgccatc cagctttgcctggaatgccaaaaggctgccagcaccttcaaacactacagctgcataagt gagctgaattcaaagctacaagacactttggaacaaatagaggagcagcttgacgtcgcc ctgtcgaagacttgtaagcactttgatgttttgcactacaccaaagtccagatggcctac acactcctgggaaaaacacagaccgctatggaccagctacacatgcacttcacccaagcc atccataatacggtgttccaagtggtgctgggatacgtcgagctgtgtgccggcaatgct gacaccaaattccagaagatgcagtataaagacctgtgcacgcacatcacccttgacagc tacattccctgcctgaccgatctttgcaaagctttgtgggaggtgatgctgagctatcac cgcaccatgcagtggcacgaggagcaggacaaacaggagaccacgcccactccagatgag tccgacgagttgactgtggatcgcagctacgtcaaaaagaagttggagcacggactctca cggatctggcaggacgtccagctgaaagtgaagtcttacatcctgggaacggacatgtcc aacttcaaatatgacgatttcattgtggttctggacgtcatcagcaggttgatgcaggtt ggtgaggagttctgtggcagcaagtctgaggtcctgcaggagtcgatcaaacgccagagt gttaactacttcaaaaactatcacagagcacgtctggaggagttgaggatgtttcttgag aatgagacgtgggagctttgtccagtcaagtccaacttcaacatcgcccagctccatgag ttcaagttcatgggccagtgtcgctctccatccatgtccccgagcagacaggcggcgtcc tcctcctacgcagcccgggaggagctgtcgctgttccagcagttccttcaggacgggaac ccctttgagatgcacatcgagcagaaagaagaggagacggaggacgtgctggcctctaat gggtatgagtcggatgagctggagaagagcgtgtatcaggaatacgacagcgacagcgac gtcgccgaggagctcaagcaggactatgttgacgagcagacaggtgacgcccctctgaag agcgtatcccgagagacgataagaagcaagagaaagtccgactactgtctcaataaggca aatgctccaatcctcaccaacaccaccctcaacgtcattcgactcgtcggcaaatacatg cagatgatgaacatcctcaaaccgattgcttttgatgtcatccactgtgtgtcccagctg tttgactactacctttacgctgtgtacaccttctttggacgcaacgatatgtatgagtca tcaggtctgggcctcatcagcagcaggctgagaaccacgctgaaccggatccaagagagc ctcattgacatggatcccgtcggggagaacgcaggagtccacggcccgacggaggaccgg aaggagaaggtgcccagcccccacctcagccaactggtggttctcacgaacagtgagacg ctctacggtctggctcagagggtggtggccaccgagtctctagcatttctggctgagcag ttcgagtccctgcagtcgcatttggatgcaatgatgcctgcagccaagaagcccttcctg cagcagttttattcccagacggtgtctacagccagcgagctgcggaagccaatctactgg atcgtggcggccaaggccatcgactacgagcagatgctgctcatgatggctggagtcaaa tgggacattagggagataatgtcacagcacaacatatatgtggacgtcctgctgaaggag tttgagcagtttaacaagcgtctgggggaggtgtccaggcaggtgcgcatccccctgccc gtgtccaacgtcctgtgggagcactgcatccgcctggccaacaggacactcgttgaagga tatgctaacgtgaagaagtgcagtaacgagggccgggccctgatgcagttggactttcag cagttcttgatgaagctggagaagctgacggacctgcggcctattcccgacaaggagttt gtggaaacctacatcaaggcttattacctgactgagaatgacatggagcagttcatcaag aaccacagggaatactccatgaagcagctcgccaacctggtcaacgtgtgtctgggttca catataaacaagaaggctcgacagaaacttctagccgccatcgacgacattgacaggccc aaaagataa

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