Oryzias melastigma (Indian medaka): 112163421
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Entry
112163421 CDS
T07439
Symbol
katnal2
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 2 isoform X1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112163421 (katnal2)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
112163421 (katnal2)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
112163421 (katnal2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
TIP49
AAA_5
AAA_14
AAA_24
AAA_22
NPHP3_N
nSTAND3
Mg_chelatase
RNA_helicase
IstB_IS21
Parvo_NS1
DUF5423
AAA_7
AAA_28
DUF815
AAA_25
AAA_33
PhoH
AAA_17
AAA_18
Motif
Other DBs
NCBI-GeneID:
112163421
NCBI-ProteinID:
XP_024155565
Ensembl:
ENSOMEG00000020611
LinkDB
All DBs
Position
LG12:complement(18162454..18170612)
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AA seq
501 aa
AA seq
DB search
MELSYQSIKIAHQTREADELKTKTRKKNLLVLIHHHLLGQGFAAAAMALDQETNGGLRRF
EVCDNIDLEMVLMEFESYHYVKFQKYPKLIKRSAETGERNVKSGGKRNSCSALKTLPRII
SSSTAKTTTSNENGTSVDPDSLELGISISSLRTGPDTNRKFSDGKTVTHDSSGGADTDHM
ERLLKPLSGFSGLSGEMKELAAIISGDIYLHNPNVRWEDIIGLEDAKRLVKEAVVYPIKY
PQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATECRTTFFNISASSIVSKWRGDSEKLVR
VLFELARYHAPSTIFLDELESVMSQRGSSFGGEHEGSRRMKTELLVQMDGLSRSEDLVFV
LAASNLPWELDHAMLRRLEKRILVGLPSSPARQAMISHWLPPLSCTGGVELKTSLDYKML
AEQMEGYSGSDIRLVCKEAAMRLVRTVFDSLESHQNCSDISAIQLGAVTTADFVEVIAHT
KPSARSLMERYTAFEREYQSV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggagctttcttatcagtccattaaaatcgcccatcaaactcgggaggcggatgagctg
aagactaaaacgaggaagaagaaccttttggtattgatccaccatcatttgcttgggcaa
ggctttgcagctgcagcaatggccttggaccaggagacaaacggaggtctgaggaggttc
gaggtttgtgataacatcgatctggagatggtgctgatggaattcgagagttatcactat
gtcaagttccagaagtatcccaaactcatcaagagatcggcagaaacaggcgagagaaat
gtgaagagtgggggcaagaggaattcctgctcggctttaaagactcttcccagaattatt
tcatcatccacagccaagacgaccaccagcaatgagaacggaacctcagtggatccagac
tcattagaacttggtatcagcatttcatctctcagaaccggaccagacacaaacagaaag
ttcagtgatggtaaaactgtgactcatgattcttctggaggagctgacaccgatcacatg
gagcggctcctcaaacccctcagtggattttcgggcttgagtggtgagatgaaggagctg
gctgcgatcatcagtggggacatctatttgcacaacccaaacgtgcggtgggaggacatc
attggtctggaggatgccaagcgattagtcaaagaggccgtcgtttatcccattaagtat
cctcaactgtttacgggaattttatctccatggaagggtttactcctctatggaccccca
ggtacaggcaagacactgctggctaaagccgtggcaacagagtgccggacaacctttttt
aatatctcagcctccagcatcgtcagcaaatggagaggtgactcagagaaactggtcagg
gttctgtttgaactggctaggtatcacgccccgtccaccatctttctggatgaactagag
tcagtgatgagccagagaggaagtagcttcgggggggagcacgagggcagccgcaggatg
aagacggaactgctggttcagatggatggactttccagatctgaggacctggtgtttgtg
ctggctgcttccaacctgccttgggagctggaccatgcgatgttaaggcggttagagaaa
aggattctggtgggtcttccctcttctcctgctcgccaagccatgatcagccattggctg
cctcctctcagctgcacaggaggggtggagctaaagacttctttagactataaaatgctt
gctgagcaaatggagggatattctggctctgatatcagactggtgtgtaaagaggctgcc
atgagactcgtccggacagtgtttgactctctggagtctcatcagaattgttctgacatt
tccgccatccagctgggagctgtgactacagcggactttgtggaggtgatcgcacacacc
aaaccatcagcccggagcctgatggagcgctacacggcctttgagagagagtaccagtct
gtctga
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