Oryzias melastigma (Indian medaka): 112163451
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Entry
112163451 CDS
T07439
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112163451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
EGF_2
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
cEGF
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
112163451
NCBI-ProteinID:
XP_024155613
Ensembl:
ENSOMEG00000009528
LinkDB
All DBs
Position
LG12:8658954..8682625
Genome browser
AA seq
2477 aa
AA seq
DB search
MHRFLAKLFLLIPAIVPSQGLQCSLPTESCLNGGKCVAASSGNGVCRCPGDYIGNRCQYP
SPCSPSPCRNGGRCRAVSRGNTFDFLCECPLGFTDRLCLTPSNHACMSTPCRNGGTCELI
ALTDFRCQCPPGWTGKSCQTPNPCASNPCANGGQCSSFDSTYRCTCPPNFHGQTCKLDVN
ECAQTPYLCLNGGICVNEVGSYHCRCPQEYTGQHCQTPYVPCSPSPCQNGGTCVQKEETT
YDCSCLPGFMGQHCEHNIDDCPGHNCQNGGVCVDGVNTYNCQCPPHYTGQYCTENVDECE
MMPNVCQNGGTCHDTHGSYHCVCVNGWMGDDCSKNIDDCATAACFHGATCHDRVASFICE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECALGA
NPCEHGGRCLNTLGSFQCKCVQGYEGPRCEMDVNECMSNPCQNDATCLDRIGGFHCICMP
GYGGVFCHIEVDECASQPCLNNGKCIDKINSFHCECPKGFSGNQCQVDIDECASTPCRNG
AKCTDGPNKYNCECAEGYTGQHCENDINECYSDPCHYGTCKDGLASFTCYCRPGYTGRLC
ETNINECLSQPCKNGGTCQDRENSYICSCPKGTAGFNCEINLDDCKSQPCDYGRCIDKIN
GYECACKPGYTGTMCNINIDDCAINPCHNGGTCIDGINSFTCLCPEGYNDATCLSQVDEC
SSNPCIHGLCQDLVNGYKCTCDSGWSGQNCDINNNECESNPCMNGGTCKDMTSGYHCTCR
VGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCGSRPCKN
GGVCKEAEDYQSFSCICPEGWQGQTCEIDINECVKSPCWNGALCFNTMGGYQCKCQPGFT
GQKCETDIDDCKPNPCSNGGLCHDGISTFTCTCLPGFRGSRCEQDINECESNPCKNGANC
TDCVNSYTCTCPTGFSGINCEINTNDCTDSSCFNGGTCVDGINSFTCLCLTGFTGSYCQF
DINECDSKPCLNGGTCLDGYGTYKCTCPHGYTGVNCQHLVRWCDSSPCKNGGTCWQQGAS
YTCQCQTGWTGLYCDIPSVSCEVAAKQQGVEVNQLCRNSGQCLDAGNTHYCRCQAGYTGS
YCQEQVDECSPNPCQNGATCTDYLGGYSCECVPGYHGVNCSKEINECQSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEMNLDDCNPFNDPFTNEPKCFNNGRCVDRIGGYQCVCPPGYV
GERCEGDVNECLSDPCDPSGSYNCIQLTNSYRCECRTGYTGQRCDKVFDGCKGRPCRNGG
TCAVASNTPHGFICKCPPGFTGSSCEYDSHSCGSLNCKNGGTCVSGHLGPRCLCPSAFTG
PECETPTDSLCISNPCYNGGTCQTTPNAPFFKCSCPSNFNGLLCHILDYSFVGGFGRDIT
PPPEVEVSCGIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWKNCSAALQCWRYF
NDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLADGHLVLVVHIPPEVLKNRSSSFLRELSSVLHTNVVFRRDAKGEPMIFPYY
GNEQDLVKHNMLKRSTDGWPEWASMPANILDEMKESVSSVVTSRKRRELDPVQVKGSIVY
LEIDNRQCYQQSSECFQSATDVAAFLGALATSGHLKVPYIEAVTSVRPPGSTSELYPMYI
VFLGLAALGFICLGVLVSRKRRREHGQLWFPEGFKVSEPSKKKRREPLGEDSVGLRPMKN
SDINLMDDNQNEWVDDDPDCRRYRLEEQAMLDLCDHTDQRKWTQQHLDAADLRIASIAPT
PPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDPSVEIISDFIYQGANL
HNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMAEELINSHADPNATDDSGKSALHWAAAVNN
VEAALVLLKNGANKDMQDNKEETPLFLAAREGSYETAKVLLDHFANREITDHLDQLPRDI
AQERMHHDIVRLLDEYNVVRSPGLHSAPLNTSTLSPPLCSPNDYLGNLKSGQSVKKVRKI
SSSGKGGKDGCKDNKLKKKKSLDGKSNLLDTSAVLSPVESLESPHAYLSDVASPPMPSPF
QQSPPMSLNQLQGSGDSHIGQVSMGKDLGCISFDPTPPRLSHLPVQSSNAQGTTSISNRG
GQCDWVSRMHHDVSQQGSYTQAATHNMLGPLHGVSTATLSQIMGYQNVQTGHLGSPSHML
QQVHSRQLQHQNSNSTAAGQTLSQNFPTIELNGSELPQNSSSGRSVPIHTVMPQETQMLG
TQFLTPPSQHSYSAPMDNTPSHQLQVPDHPFLTPSPGSPDQWSSSSPHSNLSDWSEGISS
PPTSIHSQMNLIPDQFK
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtttcttagcgaagctgtttcttctcattccggcgatcgtcccctctcaaggt
ctgcaatgctccctacccactgagtcatgcctaaatggagggaaatgtgtggccgcctcc
agtggcaatggagtgtgcaggtgtcctggtgactacattggcaaccggtgccagtatccc
agcccctgcagtccttcaccctgccgcaacggtggaagatgccgtgcagtttcccgtggc
aacaccttcgatttcctctgtgagtgcccgctgggtttcaccgacaggctgtgcctcacc
ccatccaaccacgcctgcatgagcaccccctgtcgcaacggaggaacgtgtgagcttatc
gctctcactgatttccgatgccagtgtccaccaggatggacaggaaaatcttgccaaact
cccaacccatgtgcttccaacccatgtgcaaatggtggacagtgttcatcttttgattcc
acctaccggtgcacatgccctcccaacttccatggccaaacctgcaagctggatgtaaat
gagtgtgcccaaaccccttatctgtgtctaaacggtggcatttgtgtaaatgaggttggc
tcttaccactgccgctgccctcaagagtatactggacagcactgtcaaaccccctacgtg
ccctgcagcccctcgccatgtcagaatggaggtacttgtgtccagaaagaagaaaccacc
tacgactgcagctgccttccaggctttatgggccaacactgtgagcacaacattgatgac
tgtccaggacacaactgtcagaatggaggggtctgtgtggatggagtcaacacctacaat
tgccagtgtccacctcattacacagggcaatactgcacagaaaatgtggatgagtgtgag
atgatgcccaatgtatgtcaaaatggagggacatgccacgacacccacggcagctaccac
tgcgtctgtgtcaacgggtggatgggtgacgattgcagcaaaaacattgatgactgcgcc
actgccgcttgctttcatggcgctacttgccatgatcgtgtagcctcgttcatttgcgag
tgtcctcatggccgtaccggactgctgtgccatctggatgatgcctgcatcagcaaccca
tgccaaaaaggttcaaactgtgacacaaatcctgtaaatgggaaggcgatttgtacatgt
ccaccaggttacacaggatctgcctgcaacttggatatagacgagtgtgcccttggtgcc
aacccttgtgagcatggcggtcgttgcctcaacacattaggctctttccagtgcaagtgt
gtgcaagggtatgaaggaccacgctgtgagatggacgtgaatgagtgcatgtctaatccc
tgccaaaatgacgctacctgtcttgaccgaatcggaggattccactgcatttgtatgcca
ggatatggtggtgtgttttgccacattgaggtggacgagtgcgccagtcagccttgtctt
aacaacggcaaatgcatcgacaagatcaactccttccactgcgagtgccccaaagggttt
tcaggaaatcagtgtcaggtggatatagatgagtgtgctagtacgccctgcaggaatgga
gccaaatgtacagatggtcccaacaagtataattgtgaatgtgctgaaggttacacaggc
caacactgtgagaatgacatcaacgagtgctactctgatccttgccactatggcacttgt
aaagatggtcttgcttctttcacctgctactgccgccctggctacaccggccgcttgtgc
gaaaccaacatcaatgaatgtctcagtcagccttgtaagaacggtggcacctgccaggac
agagagaactcctacatctgctcctgtcctaaagggaccgcaggcttcaattgtgagatc
aacttggacgactgcaaaagccagccctgcgactatgggaggtgtatcgacaaaatcaat
ggctatgagtgtgcatgcaagccaggttacacaggcaccatgtgtaacattaacatcgat
gactgtgccatcaatccatgccacaacgggggcacgtgcattgacgggatcaacagcttc
acttgcctctgtcccgagggttacaacgatgccacctgtttgtcacaggtggacgaatgc
agcagcaacccttgtatccatggcctttgtcaagaccttgttaatggttataaatgtacc
tgcgactccggatggagtggccaaaactgtgacattaacaacaacgaatgcgagtccaac
ccctgcatgaacggaggcacgtgcaaggacatgaccagtggataccactgcacatgcaga
gtcggctttactggacctaattgccaaactaacatcaatgagtgtgcctccaacccctgc
cttaaccaggggacatgcatcgacgatgtggctggatacaagtgcaactgtttgctgcct
tacaccggtgaaaactgcgagaccctgctggccccctgtggttcccgcccctgtaaaaat
ggtggtgtgtgcaaggaggctgaagactaccaaagcttttcttgcatctgccctgaagga
tggcaaggccaaacatgtgaaattgacatcaacgaatgtgtgaaaagtccgtgctggaat
ggtgctctttgcttcaacactatgggaggctaccagtgcaagtgtcaaccgggtttcact
ggccaaaaatgtgaaacagacatcgatgactgcaaaccgaacccgtgcagtaatggaggt
ctgtgccacgatgggatcagcactttcacgtgcacgtgtctgcccggctttcgtggcagc
aggtgtgagcaggacataaacgagtgtgaaagtaacccctgtaagaatggggccaactgc
actgactgtgtcaacagctacacctgcacctgccctacaggatttagcggcataaactgc
gagatcaacaccaacgactgcactgacagctcatgctttaatggtggtacttgtgtggat
ggaatcaattcattcacttgcctgtgtctcactggattcactggaagctactgccaattt
gatataaatgagtgtgactccaagccttgcctcaatggaggaacttgtcttgatggctat
gggacgtataagtgcacctgtcctcatggctacacaggagtaaattgtcagcatcttgtc
cgatggtgtgactcctccccctgtaagaatggaggcacttgctggcagcagggtgcttct
tacacctgtcagtgccagactgggtggaccggcctctattgtgacatcccgagtgtttct
tgcgaggttgctgctaaacagcaaggtgtggaagtgaaccagctgtgcaggaattcaggg
cagtgtttagatgctggaaacacacattactgccgctgccaggctggttacactgggagt
tactgccaagaacaggtagatgagtgctcacccaacccttgtcagaatggagcaacctgt
accgactaccttggaggttacagttgtgagtgtgtccctggttaccatggagttaactgc
tccaaagagatcaatgaatgccagtctcaaccctgccagaatggcggcacctgcattgat
ctcatcaacacctacaaatgctcctgtcctagaggaacacagggtgtccactgtgagatg
aacttggacgactgcaaccccttcaatgatccattcacaaacgagcccaagtgctttaac
aatggcagatgtgtggaccgcattggaggctaccagtgcgtgtgtcctccaggttacgtt
ggcgaacggtgtgagggcgacgtcaacgagtgtttgtcggatccttgcgaccccagtggg
tcttacaactgcatccagctcacgaacagttaccgctgtgaatgccgcactggctataca
ggacagcgttgtgacaaggtttttgatggctgtaaaggacgaccctgcagaaatggaggg
acttgtgcagttgccagcaatacacctcatggtttcatctgcaaatgcccccctggcttt
actggttcttcttgcgaatatgactcccactcttgcggaagtctgaactgcaagaatggt
ggtacatgcgtgtcaggtcacctaggcccccgctgcctgtgcccctcagcttttactggg
ccagagtgtgaaacccccacagacagcctttgcatttccaatccctgttacaatggcggt
acgtgccagaccacccctaatgctcccttcttcaagtgcagctgccccagcaacttcaac
ggccttctttgccacatactggattactcctttgtcggggggtttggccgagatatcacc
ccacctccggaggtggaggtaagctgtgggattccacagtgtgatgagtgggctggcaat
cacatctgcgactcactctgcaacaaccatgcctgtggctgggatggaggagactgctct
cttaattttgatgacccatggaagaactgctcagctgctctgcagtgctggcgttacttc
aacgatggaaagtgtgatgggcagtgtaacagcccgggatgcctctatgatggctttgat
tgccaaggacaagaagggcagtgcaatccattatacgatcagtattgcaaagaccattac
gctgacggtcactgcgaccaaggctgcaacaatgcagaatgtgaatgggacggcctggat
tgtgccaacaacatgccagagaagctagcagatggccatttagttctggtggtccacatt
cccccagaagtgctgaaaaaccgctcatcatcgttcctcagagagctcagcagtgtcctc
cacaccaatgtggtgtttcgccgggatgccaaaggagagcccatgattttcccttactat
gggaatgagcaggacctggtcaaacacaacatgctcaaacgatcgacagacggctggcca
gagtgggcctcaatgccggccaacatcttggatgagatgaaggagagtgtgtcctctgtg
gtcacctcaaggaaacgcagagaactggatccagtgcaagtcaaagggtctatagtgtac
ctggagattgacaaccgtcagtgttaccagcagtcctctgaatgctttcagagcgccaca
gatgttgctgcattcctcggagcgttggccaccagtggacacctcaaagttccttatatt
gaagctgtcacaagtgtgaggccacctggatccacttctgagctctaccccatgtacata
gtcttcctgggtttggctgctctgggttttatatgcttaggtgttctggtgtcccgcaaa
cggcggcgagaacatggccagctctggtttccggagggatttaaagtatctgagcctagc
aaaaagaaacgcagagaaccattgggggaagactctgttggactgagacctatgaaaaat
tctgacataaatcttatggatgacaatcaaaatgaatgggttgacgatgatccagactgt
aggcgctacaggttggaggagcaagccatgttagatttatgtgatcacactgatcaaagg
aaatggactcagcaacacctggatgccgctgatctgcggattgcatccattgctccaacg
cctcctcaaggagaaattgagaacgactgcatggacgtcaacgtccggggaccagatgga
ttcacccctttgatgattgcctcctgcagtgggggaggattggaaactggtaacagtgag
gaggaggaggatccctcagtggaaataatctcagacttcatttaccagggagccaacctc
cataaccagactgaccgaacgggagagactgccctccacctggcagcccgctacgctcgg
tcagacgctgctaagcgcctcttggaatccagtgctgatgccaacgttcaagacaacatg
ggtcgcactccgcttcacgctgctgtggcggcagatgcacaaggagtgttccagattttg
atcagaaatcgggccaccgatctagacgcccgcatgcatgacggaacaacacctttaata
cttgctgctcgcttagcggtggagggaatggctgaggagcttatcaactctcacgctgat
cctaatgccacagatgactctggtaaatctgcccttcactgggctgcagcggtaaacaac
gtggaggctgccttagtcttgctgaagaatggtgccaacaaggatatgcaagataacaag
gaggaaaccccactcttccttgcagcccgcgaaggcagctacgagacagcaaaggtactt
ctggatcactttgccaaccgcgaaatcacagaccacctcgaccagctgcctcgggatatc
gcccaggagcgcatgcaccatgacattgtccgtcttctggacgagtacaatgtggtacga
agtccggggctccacagtgcccccctaaacacctccaccctttcaccgcccctctgctct
ccaaacgactatctcggcaacctgaagtcaggtcagtctgtgaaaaaggtccgtaaaatt
agctccagtggaaaagggggaaaagatgggtgcaaagataacaagctgaaaaagaagaag
tctctggatgggaagagtaacttgttggatacatcagcagttctctccccagttgaatcc
cttgagtctccccatgcctatctgtcagatgtggcctctcctcccatgccatcccccttc
cagcagtctccacctatgtccttgaatcagctgcaaggcagtggggactcccacataggc
caggtgagcatgggcaaagatttgggctgcatttcttttgacccaacaccacctcgcctc
tcccacctgcccgtgcagagctccaacgctcagggcacgacatccatcagcaaccgagga
ggtcagtgcgactgggtctccaggatgcatcatgatgtgagtcagcaaggaagctacacc
caagcagcgacacacaacatgctggggcctctgcacggagtcagcactgccactttgtct
cagataatgggctaccagaacgtgcagaccggtcacctcggctcgccctcacacatgctg
cagcaggttcactcccggcaactgcagcaccagaactcaaactccaccgcggctggtcaa
accctcagccagaactttcccactattgagctgaacggctccgaactgccgcagaacagc
agctcgggccggtcggtgccgatccacacggtgatgccccaggagacgcagatgttggga
acccagtttctcacccctccatcccagcacagctattcagcccctatggacaacactccc
agccaccagctccaggtccccgaccacccgtttctgaccccctccccggggtctcccgac
cagtggtccagttcatccccacattccaacttatccgattggtcggagggcatctccagc
ccgcccacaagcatccactcacaaatgaatctcatcccagaccagtttaagtag
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integrated database retrieval system
