Oryzias melastigma (Indian medaka): 112163473
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Entry
112163473 CDS
T07439
Symbol
sec31a
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112163473 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112163473 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
oml02044
]
112163473 (sec31a)
Membrane trafficking [BR:
oml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112163473 (sec31a)
Secretion system [BR:
oml02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
112163473 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
TPR_Sec16
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Prp18
Motif
Other DBs
NCBI-GeneID:
112163473
NCBI-ProteinID:
XP_024155648
Ensembl:
ENSOMEG00000018435
UniProt:
A0A3B3DRQ3
LinkDB
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Position
LG12:complement(2609388..2631974)
Genome browser
AA seq
1320 aa
AA seq
DB search
MKLKEINRTAIQSWSPAQHHPIYLATGTSAQQLDASFSTNASLEFFELDLADPTLDMKSC
GSFSSTHRYHKLVWGPFGMDSQGHPSGVLIAGGENGNVILYDPARIMAGESDVVITESDR
HSGPVRALDVNPFQANLVASGGNESEIFIWDMNNFGSPMTPGPKTQPLEDISCVAWNRQV
QHILASASPSGRASVWDLRKNDLIIKVSDHSNRMHCSGLAWNPEVATQLVLASEDDRMPV
IQMWDLRFATSPLKILENHTRGILAISWSLADPELLLSCGKDSRILCWNPNTAEVLYELP
TSSQWCFDIQWCPRNPAVLAAAGCDGHIDIFSIMGGSSRAQSQRHADQISNSFGNMDPFG
TGQALPPLQLPQSSAPPASAIPLKKPPKWICRPVGASFAFGGKLVSLDNAKPQVQPQQQP
ASHVVHISQVVTETALLDRSEQLQATLSSGNFVGFCQEKIDGAENQFERTLWSFLKVNFE
SDVRSKYLELLGYNREELASKISAALAEKPADAPQPEPSAPAPLQPPADVPPADAPEAAF
DWIAAANSQPAITLSPTPESEEPEEPAADGREEDLEEEEEAEEKEEEEEEEEIPLNEDVV
APAEEISPVETPAEIPTPAPTPAGVALSISQDVDGLITQALLTGDFEAAVELCLHDNRMA
DSIILAIAGGSELLEKTQRKYFTKTRSRISKLISAVVMKDWHDILKTCDLQNWKEALAAV
MTYAQPEEFSSLCDLLGGRLEAAEDAQLKSQACLCYICAGNVEKLVSCWSRAQGGRSPLC
LQDLVEKVVVLRQAVEQTRHSGPAAIGVLLAEKMSLYANLLASQGSLATAISYLPDNTDQ
VSVQQLRDRLSRALGQQAAAAPARPQGAPSHHPQPSPAPFVPAHQPAGPPTQQHYHQPVR
AASTVTSWSNQTPTALPNVPPPPHPVGSASNPQAEPPAPGYRMPAPGPAAPPPASSAPAY
MFSHQYQQPHVRPPAFPQVNQYPSQAGGPPVYPPQYSSAHQTPPTDPSSPPPHPPGFLSQ
YTQPVPPQPAPLLYPGQPPSSHPGFPPSSSSSSSSSFSAPPSSGESFQHGGPGSPVSYLP
PPPTGVSGTQLEPPLIPASQRTGPQNGWNDPPSLTHAPKKKQLPQNYTPPAPITAPIMAP
LGADPQTQQIPSAAPQGPQVSFSGMHPQQLSPPSMNPAMPNTSMEGAPGAPTGDVIQPLQ
SIPAEKILKKPIPDEHLILKTTFESLIQKCLAVAADPQTKRKLDEANKRLEALYDKLREQ
TLSPAIVSGLHNIARSIEARSYTDSLNIHTHIVSHSNFSETSAFMPVLKVVLTQANKLGV
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaagagatcaaccgcacagccatccagagctggagtcctgcacagcaccac
cccatctacctggccacaggaacatcagcccagcagctggacgcctctttcagcaccaat
gcctccctggagttcttcgagttggacctggccgatcccactctggacatgaagtcctgc
ggctccttctcctccacccacagataccacaagctggtgtggggccccttcggcatggac
tcccagggtcacccgtctggcgtcctgatcgcgggcggtgagaacgggaacgtgatcctg
tacgacccggcgaggatcatggcgggagagagcgacgtcgtcatcacggagagcgaccgg
cactcggggccggtgagggctctggacgtgaacccgttccaggcaaacctggtggcgtcg
ggcggcaacgagtcggaaatttttatctgggacatgaacaactttggttctccaatgacg
ccgggacccaaaactcagcctctggaggacatcagctgcgtggcgtggaaccggcaggtc
cagcacatcctggcgtctgccagcccgagcggccgagcgtcggtgtgggacctccggaag
aacgacctcatcatcaaagtcagcgaccacagcaacagaatgcattgctccggcctggcc
tggaacccggaggtggccacgcagctggttctggcgtcggaggacgaccggatgcccgtc
atccagatgtgggaccttcgcttcgccacctctccactgaagattttagagaatcacaca
cgggggatcctggccatctcctggagcctggcagaccccgagctgctgctgagctgcggg
aaggacagccggatcctctgctggaaccccaacacagcggaggttctgtacgagctcccc
accagcagccagtggtgcttcgacatccagtggtgcccccgaaaccccgcggtgctggcg
gccgctggctgcgacggacacatcgacatcttctccatcatgggcggcagcagccgggcg
cagagtcagagacacgccgaccagatcagcaactccttcggtaacatggatccttttggg
acgggccaggctttacctccactccagctgccccaaagctccgcccctccagcttcagcc
atccctctgaagaaaccccccaagtggatctgccggcctgtgggggcttcgttcgctttc
ggaggaaagctggtttctctggacaacgcgaagccgcaggtgcagccgcagcagcagccg
gcgtcccacgtcgtgcacatcagtcaggtggtcacagaaacagctctgctggatcgctcc
gagcagctgcaggccacgctcagctccgggaacttcgtgggtttctgccaggagaagatc
gacggcgctgaaaaccagtttgaaagaactctctggtcttttctgaaggttaattttgag
agcgacgttcgcagcaaatacctggaacttctgggctacaacagagaggagctggcctca
aagatttctgcagctttagctgaaaaacctgcagatgctccacagccggagccgtctgct
cccgcccctctgcagccgcctgcagacgttcctcccgcagacgctccagaagctgctttt
gactggatcgcagccgcaaactcgcagccagccatcactctgagtccaactccagagtcc
gaggagccggaagaaccggccgcagacggccgagaggaagatttggaggaggaagaggag
gccgaagagaaagaagaggaggaggaggaggaggagattcccctgaatgaggacgtggtg
gctccggcagaggagatcagtccagttgagacgcctgccgagatcccgactccagctccg
acgcctgcaggagtcgccctgagcatcagtcaagatgtggacgggctgatcactcaggct
ctgctgactggagactttgaggccgccgtggagctctgtctccatgacaaccggatggcg
gacagcatcatcttggccatcgccggcggctccgagctgctagaaaaaacccagagaaag
tattttaccaaaacgcgcagcaggatatcgaagcttatcagcgccgtcgtcatgaaggac
tggcacgacatcctgaagacgtgcgacctccagaactggaaggaggctctggccgccgtc
atgacctacgctcagcctgaggagttttcgtccctctgcgacctgctcggcggccggctg
gaggccgcggaggacgctcagctgaaatctcaggcctgtctgtgttacatctgcgccgga
aacgtggagaagctggtgtcctgctggagccgagcgcagggcggacgtagtcctctgtgt
ctgcaggatctggtggagaaggtggtggtgctgcgtcaggcggtggagcagacccggcat
tccggccccgccgccatcggcgtcctgctggcagagaagatgagcctctatgcaaacctg
ctggcctctcagggcagtctggccacggccatcagctacctgcccgacaacaccgaccag
gtttctgttcagcagcttcgggaccgcctcagccgggctctgggtcagcaggcggccgct
gctcccgcacgcccccagggggcgccctcccatcacccccagcccagcccagctccattt
gttcccgcccaccagcccgctggtcctccgacccagcaacactaccaccaacccgtgagg
gctgcctccactgtcacctcctggagtaaccaaacccccaccgccctccccaatgtccct
cctcctcctcatccggtaggcagcgcctccaacccacaggcggagcctccggcccccggg
tacaggatgccggcccccggccccgcagcgcctcctcctgcctcctctgctcccgcctac
atgttctcccatcagtaccagcagcctcacgtgcgacccccagctttccctcaggtcaac
cagtacccgtcccaagctggcggcccacccgtctatcctcctcagtactcgtcagctcat
caaactcctcccacagacccctcctcccctcctcctcacccccccggcttcctgtctcag
tacactcagcccgtcccgcctcagccggcgcctcttctttatcccggacagcctccgtcc
tcacaccccggtttccctccttcctcctcttcttcttcttcttcttctttttctgctcct
ccgtcctccggagagtctttccagcatggggggccaggatctcctgtgtcgtacctgccg
cccccgccgaccggagtatcaggtactcagctcgagcccccgctgatccccgcctcccag
agaacaggacctcagaacggctggaacgaccccccatccctgacccacgcaccgaagaag
aagcagcttccacaaaactacaccccccctgcacccatcaccgcccccatcatggccccg
ctcggcgctgaccctcagactcagcagatcccctctgcagctcctcagggtccccaggtc
tctttctcgggcatgcacccacagcagctgtcccccccctcgatgaaccctgcaatgccc
aatactagcatggagggggcgccaggagcccccacaggagacgtgattcagccgctgcag
tccatccctgcagagaagatcctgaagaagcccatccctgacgagcacctcatcctgaag
accacctttgagagcctgatccagaagtgtctggctgtggctgccgacccccaaactaag
aggaagttggacgaggccaacaaacgcttggaggcgctttacgacaaactgagggagcag
acgctctctccggccatcgtctccggacttcacaacatcgcccggagcatcgaagctcgc
tcctacacggacagcctcaacatccacacccacattgtcagccacagcaacttcagcgag
acgtcggcgttcatgcccgtcctgaaggtggtcctgacgcaagccaacaagctgggcgtg
tga
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integrated database retrieval system
