Oryzias melastigma (Indian medaka): 112163479
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Entry
112163479 CDS
T07439
Symbol
lman1
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112163479 (lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112163479 (lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
oml04091
]
112163479 (lman1)
Membrane trafficking [BR:
oml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
112163479 (lman1)
Lectins [BR:
oml04091
]
L-type lectins
112163479 (lman1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Golgin_A5
Lectin_legB
SecDF_P1_head
GCN5L1
Motif
Other DBs
NCBI-GeneID:
112163479
NCBI-ProteinID:
XP_024155665
Ensembl:
ENSOMEG00000007069
LinkDB
All DBs
Position
LG12:complement(9832777..9848739)
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AA seq
510 aa
AA seq
DB search
MAVCETQRPALYFILSFLAAASFHRGVADVTTDAPSSGEPPHRRFEYKYSFKGPHLAQSD
GSIPFWIHSGSAIPSADQVRITPSLRSQRGSVWTKNKVNFDHWEAEVTFRVSGRGRTGAD
GLAVWFTTAQGVDGPVYGAADLWNGVGIFFDSFDNDAKKNNPAIIVVGNNGNLVYDHQND
GSTQALGTCLRDFRNKPYPIRAKIIYYKKTLTVMINNGFTPDKEDYEFCTKVDNMIIPKE
GFFGISAATGGLADDHDVLSFLLFRLTEPGQQPPSVDAEIPKEEKDKYQEEFENFQQELD
KKKEEFQKEHPDVQGEPIEDLYESVNDREIRQVFEGQNRIHLEIKQLNRQLAMILDEQRR
SVSAITDEINKKATTAGSGQLESQQLSSVIATQQEVLKSLNDLRTSLLNSLNQVGSVQQG
NAGGLGTYETIQHFNDIKEHLHAVKRDVENLAQRNAQNPAEKVVKCPEVPPMPSCLSTVH
FAVFVVIQSVLFFCYVVYKSQQEAAAKKFF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtgcgaaacacagcggccggctctttactttattttaagttttctcgcagct
gcatcttttcaccgcggtgtcgccgacgtcaccacagatgccccgagctcaggagagcct
cctcaccgccggtttgagtacaagtacagcttcaaaggaccacacctggcgcagtctgac
ggcagtatcccattctggatccacagtggaagtgccattccaagtgctgatcaggtgcgc
attacgccatccctcaggagtcagaggggctccgtgtggacaaaaaacaaagtcaacttt
gaccactgggaggccgaggtgaccttcagagtatctgggagaggcagaacaggagcagac
ggtttggcggtgtggttcaccaccgcacaaggtgttgatggtcccgtgtacggtgctgcc
gacctgtggaacggagttggaatcttctttgattcctttgacaatgatgccaagaaaaat
aacccagctataattgtcgttggaaacaatggcaaccttgtttatgaccaccaaaacgac
ggctccacacaggccctcggtacatgtttacgggacttccgtaacaaaccgtatcccatc
agggccaaaatcatctactacaagaaaactctgacggtcatgatcaacaacggtttcact
ccagacaaggaagattatgagttctgcacaaaggtggacaacatgatcattcctaaggaa
ggcttctttggcatttcagctgccactggcggtttagcagatgaccacgatgttttgtcc
ttcttgttattcagactcacagagccaggccagcaaccgccctcggtggacgctgagatt
cctaaagaagagaaggacaagtaccaggaggaatttgagaacttccagcaagagctggac
aaaaagaaggaggaatttcagaaggagcacccagacgtccaaggagagccaattgaggat
ttgtatgaaagtgtgaacgaccgggaaatccgtcaggtgtttgaaggccagaatcggatc
cacctggaaataaagcagctcaacagacagctggctatgatcctggatgagcagcgcaga
tccgtctctgccataacagacgagattaataagaaggcaacgaccgccgggtcaggacag
ctggaatctcagcagctcagttctgtcatagcaacgcagcaggaggttcttaaaagcctg
aatgacctgagaacctccttactcaactccttgaaccaggtcggttccgtccagcagggt
aatgcaggcggactgggcacgtatgagacgattcagcatttcaatgacattaaagagcac
ctgcacgctgtcaaaagggatgtggaaaacttagcccagcgtaatgctcagaatcccgct
gaaaaagtggtgaagtgccctgaggtgcctcccatgccttcctgcttatccactgttcac
tttgctgtatttgttgtcatccagtcggttctgttcttctgctacgtcgtgtacaaaagt
caacaagaagcagctgcaaagaagttcttttga
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