Oryzias melastigma (Indian medaka): 112163481
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Entry
112163481 CDS
T07439
Symbol
dhx29
Name
(RefSeq) ATP-dependent RNA helicase DHX29 isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
oml03012
]
112163481 (dhx29)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112163481 (dhx29)
Translation factors [BR:
oml03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112163481 (dhx29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
Helicase_C
OB_NTP_bind
DEAD
HA2_C
DSRM_DHX29
HA2_N
AAA_22
nSTAND3
AAA_16
FtsK_SpoIIIE
AAA_23
Motif
Other DBs
NCBI-GeneID:
112163481
NCBI-ProteinID:
XP_024155667
Ensembl:
ENSOMEG00000008943
LinkDB
All DBs
Position
LG12:complement(8769565..8784331)
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AA seq
1383 aa
AA seq
DB search
MGGKKKKSAGQAPAVAAERRNGAASGSAVTGSGEETTKQNATNKPQKSSKESKSKAAPKT
YSLTNTAQVEKSGVSEKSILTVCIQADLEKKIIKLINDFRQENGDKGPISGRLTTKKLLD
LYTALQKFNFKREHIEEAMKSSVLYGGDLHSALDWLCLNLKDDELPDGFSQQLQEESQKN
RPKFQPALQEKPAVQTPKMPTNTHKDTHKATEKDEAATVKDWILRYAEQSSEDEEEEEED
GAKKSVNPELEEKFDPNDRYLILTAQLYDTKEMASAAKTKADKAGQRMAQDRIRIIQQEM
KQLESHPMFNPAIKVVEAPQSEKKKTPVIEEKEDLSFSLFERAEKEKGPPAEKVVKKNEP
KDIRNFDYTARSWTGKSPKQFLIDWVRKNLPKSPPPAFHKVPAGRYWRCKVRVQRAEDVL
EVCPSILTEDSMQAQHLGATLALYNLVKGQSVHQLLPPTYRDVWLEWRDSEQQQQQESRT
AANKPRDQFISRLLTRLKQEQQNQSRGQQQQAASPAQSGEEEPEESWENLDSLDIRDGSE
DIEDKNKKSPGKRGGEAGLHAARELLLELRKSPLSSKLQAEREQLPVFQHRHQVLEALQR
HPVVVVAGETGSGKSTQIPQFLLEELLTGGKTAQPCNIVVTQPRRISAVSLACRVSQELG
CEDGPGAKSSLCGYQIRMENQSGEWTRLLYCTTGVLLRKLQHDRHLSSLTHIIVDEVHER
SVQSDFLLTILKDVVMRRSDLQLILMSATVDCHKFSSYFNRCPVINIPGRTFPVEVSHLE
DIVEQTGYVLEKDSEYSQRILEEEEEVVSVAVTQKGGKTLQHQEAIVRDAPSGWDLGRDL
DHFSSRTRQVLQYMNPNKINMDLLVELLEYLEKSPQFADVDGAVLVFLPGLAHIQQLHDL
ISSNKRFRDKNRYRIVALHSTLSSKDQAAAFTVPPAGVRKIVLSTNIAETGVTIPDVVFV
IDTGKTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRSGFCFRLYPKYRFDAFMDY
SIPEILRVPLEELCLHIMKCQYGSPEDFLSRALDAPQPQSVSNAVNLLRKIGACHPDDHT
LTPLGHHLASLPVNVKIGKMLIYGAILGCLEPIATIAAAMTEKSPFSTPMNRKDEANLAK
AALAVANSDHLTIYNAYLGWKTVQAEGLKAEMTYCRKHFLNRTALITIEDVKHELTKMME
QAGFWSSRPSRVKQQTASLSKQQISVLNAALTAGLYDSVARILCTPSVDVLERIACTVET
PQGKAQVHPSSVNRSLQTHGWLLYQEKVKYGKIYLRDTTLISPFPMLLFGGDIDIQHREK
LITLDGWINFQAPVRIGVIFKHLRKLMDSLLEKKLENPRMNLEGDTTIHLILDLIRSEHT
TER
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaaagaagaaaaagtcggcgggtcaagccccggcggtggcagccgaacgcagg
aatggagcagcttcaggttctgcagtgaccggttctggagaggagacgacgaagcagaat
gccaccaacaaaccgcagaaatcatcaaaggagagcaaatctaaagcagctcccaaaacc
tacagtttaaccaacacagcccaggtggagaaaagtggagtgtcagaaaagtccattctt
acagtttgcattcaagctgatctggaaaagaagatcattaagctgatcaatgacttcaga
caggagaatggagataaagggcccatatctggcaggcttacaaccaaaaaactgctggac
ttgtacacggctctccagaagttcaacttcaagagggaacacatcgaagaggcaatgaaa
agtagtgtcctgtacggaggcgatctgcattccgccctcgactggctctgcctcaacctt
aaagatgatgagttacctgatggtttcagccagcagctgcaggaggagagccagaagaat
cgccctaaattccagcctgccctccaggagaaacctgcagttcaaacccccaaaatgccc
accaacacccacaaagacactcacaaggccacagaaaaggatgaagctgcaactgtcaag
gactggatcttaaggtacgcagagcaaagcagtgaggatgaagaggaggaggaagaagat
ggagcgaagaagagcgttaatcctgagcttgaagaaaagtttgatcctaatgacaggtac
ttgattctcacagcacagttgtatgacactaaagaaatggcgtcggctgctaagaccaaa
gcggacaaagcgggtcagaggatggcacaggacagaatacgcatcattcaacaagaaatg
aaacaactggagtcccatccgatgttcaatccagccataaaagtggtagaagctcctcaa
agcgagaaaaagaaaactccagtcattgaggagaaagaagatctcagcttcagtttgttt
gagcgagcagagaaagagaaaggccctcctgcagagaaagttgtgaaaaagaacgaaccg
aaagacatcagaaactttgactacacagctcggagctggacgggaaagtctcccaaacag
ttcctcatcgactgggtgcgaaagaaccttcccaaaagtcccccgccagcttttcacaaa
gttcctgctggcagatactggagatgcaaggtgcgtgtccagagagcagaagatgttctg
gaagtttgtccaagtatcttgactgaagacagcatgcaggctcaacatctgggtgccacc
ttggcgctctacaacctggtgaaaggacaatcggtgcaccagctcctccctcccacctac
agagacgtgtggctggagtggagagacagcgagcagcagcagcagcaggagagccgcacc
gccgccaacaaaccgcgggaccagttcatctcccggctcctgaccagactcaagcaggag
cagcagaaccagagccgagggcagcagcagcaggctgcatccccagcacagagcggagaa
gaggagcctgaggaatcctgggagaacctggatagtcttgatatcagagatggaagtgag
gacattgaagacaagaataagaaaagtccagggaaacggggaggagaagcaggccttcat
gcagccagagagctccttttggagttgaggaagtctcctttatcctccaaactgcaggca
gagcgagagcagcttccagttttccaacatcgacatcaagtcctggaggccttgcagcgc
catccggtggtggtagtggcgggtgagacgggcagtgggaagagcacacagatccctcag
tttctcctggaggagctgctgaccggaggaaaaacggctcagccctgcaacatcgtggtg
actcagcctcgcaggatctcagccgttagtctggcctgcagagtgagccaggagctgggc
tgtgaagacgggccgggagctaagtcgtcattgtgcggataccagatccggatggagaac
cagtcgggggagtggacccgcctgttgtactgcacgactggagttctgctcaggaagctc
cagcatgaccgacacctcagctccctgacccatatcattgtggatgaggtccacgaacgg
agcgtccagtccgacttcctgctgaccatcctgaaagatgttgtgatgaggagatctgac
ctgcagctgatcctcatgagcgctacggtggactgccacaagttctccagctacttcaac
cgctgcccagtgatcaacattccaggcaggactttcccggtggaggtgtctcacttggag
gacattgttgaacagacaggttatgttctagagaaggactctgagtacagccagagaatc
ctagaagaggaagaagaagtcgtctcagtcgccgtcactcaaaaaggtggcaagactttg
caacaccaggaagcgattgttagagacgccccctccggctgggaccttggtcgagacctc
gaccacttcagcagcaggactcggcaggtgcttcaatacatgaaccccaataaaatcaac
atggacctgcttgttgagcttttggagtacctagagaaatcgccacagtttgcagatgtg
gatggagcagttctggtcttcctcccgggtctggctcacatccagcagctgcatgacctc
atctcctctaataaaaggttccgagacaaaaacaggtacaggattgttgctcttcattcc
actctgtcttcaaaggaccaggctgctgccttcacagtgccccctgctggagttagaaag
attgtcctgtcaaccaacattgctgagacaggcgtgactattcctgatgttgtgtttgtt
attgacactggaaagaccaaagaaaacaagtaccatgagagcagtcagatgagctcccta
gtggagacgtttgtctccaaagccagcgccctccagaggcaggggagagcaggacgcgtc
cgcagcggcttctgcttcaggctttaccccaaatacaggtttgatgctttcatggattac
tccattcccgagatcctgcgagtcccactggaagaactctgtcttcacataatgaaatgc
caatacggttccccagaggacttcttgagccgagctctggatgctcctcagcctcagtcg
gtcagtaatgccgtcaacctcctcagaaagatcggtgcgtgccaccccgacgatcacacc
ctcacccctctggggcaccacctggcaagccttcctgtcaatgtcaagatcgggaagatg
ctcatctacggagccatcctcggttgtctggagcccatcgcaaccatcgcagcagccatg
acggagaaatctcctttctctacacccatgaacagaaaggatgaagctaacctggctaaa
gctgctctggcagtcgccaactccgatcacctcaccatttacaatgcatatttagggtgg
aaaactgttcaggctgaaggcctgaaagctgagatgacttactgcaggaaacacttcctc
aatcggacagctttaatcacaatagaggatgtaaagcatgagctgacgaagatgatggag
caagctgggttttggtcatcccgcccctctcgcgtcaaacagcagacggcctccctgtcg
aagcagcagatctccgttctgaacgcggcgctgacggcggggctgtacgacagcgtggcc
cgcattctctgcacgccctccgtggatgtgctggagcggatcgcctgcacggtggagacg
cctcagggcaaagctcaggtccacccttcatctgtcaaccgcagcttgcagacgcacggc
tggctgctttaccaggagaaggtgaaatacggtaagatctacctgcgagacaccactttg
atctctcctttccccatgctgctgtttggaggcgacatcgatattcagcacagagagaag
ctcatcactttagatggatggatcaacttccaggctccggtacggattggcgtgatcttc
aagcatttgaggaaactgatggactctctgctggaaaagaagctggaaaaccccagaatg
aaccttgaaggagatacaaccatccatctgattctggatctgattcggtctgaacacacg
actgaacgctga
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integrated database retrieval system
