Oryzias melastigma (Indian medaka): 112163487
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Entry
112163487 CDS
T07439
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1 isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112163487 (kcmf1)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112163487 (kcmf1)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112163487 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
zf-C2H2
TFIIA
Zn_SUZ12
DUF6244
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
112163487
NCBI-ProteinID:
XP_024155677
Ensembl:
ENSOMEG00000010699
LinkDB
All DBs
Position
LG12:8177225..8186729
Genome browser
AA seq
389 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRFKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVD
YDLYYGGDTFSVEQPQSFTCPYCGKMGFTETSLQEHVTSEHAETSTEVICPICAALPGGD
PNHVTDDFTAHLTLEHRAPRDLDESSSVRHVRRMFHPGRGLGGPRARRTNMHFTSGSTGG
LSSSSSQSSTYTPSNREAMDPIAELLSQLSGVRRAAGGQINSSGPSASQLQQLQMQLQLE
RQQAQAARQQVESGRHAARRGNNPSNSGTAIPPPSTATVTTTTVGEMNSPSSSHSSQFLL
SRLNEPKMSEAERQFLEGERADHSLFVQELLLSTLMREESSSSDEDERRDFADFGAMGCV
DIMPLDVALENLQLRESSSSGKEPPPPPL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgagggtgtgagctgtgatgcatgtttaaagggcaactttagaggacga
cggttcaagtgcttaatctgctacgactacgacctgtgcgcatcgtgctacgagagcggc
gccacgacaacacggcacaccacagaacaccccatgcagtgtatattaactagagtagac
tatgacttgtattacggaggagacactttctcggtagagcaaccccagtcgttcacatgt
ccttactgtggcaaaatgggtttcacggagacatccctgcaggagcatgtcacctctgag
catgcagagacttccacagaggtgatctgtccgatatgtgctgctctgccaggaggagac
cccaaccacgtcacagacgacttcacagctcacctcaccctcgaacacagagcgccaaga
gatttagatgaatccagcagcgtgcggcatgtacgcaggatgttccaccccggaagaggt
ctgggaggccccagagcacggcggacgaatatgcactttactagcggctccacgggagga
ctttcctcctcctcatcacagagctccacatacacccccagtaacagagaagcaatggac
cccatcgcagagctgttgtctcagctgtcaggcgtgcggcgtgccgcgggcgggcagata
aactcctcgggcccttcggcctcccagctccagcagcttcagatgcagctgcagttggaa
cggcagcaggcgcaggcggcgcggcagcaggtggagagcggcaggcacgcggcgcggcgc
ggcaacaacccgagcaacagcggcaccgccatccctccgcccagcacggcaaccgtcacc
acgaccaccgtgggtgaaatgaattccccgtcctcatcccacagctcccagttcctatta
tcacgattgaacgaaccgaagatgtccgaagcggaacggcagtttctagaaggagagcga
gccgaccacagcctgtttgtccaggagctccttttgtccactttgatgcgagaagagagc
tcctcctcggacgaagacgagcgccgagacttcgccgacttcggagccatgggctgcgtg
gatattatgcctttagacgtggcgctggagaacctgcagcttcgggagagcagctcttcg
gggaaggagcctccgccgcctcctctttga
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