Oryzias melastigma (Indian medaka): 112163492
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Entry
112163492 CDS
T07439
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03420
Nucleotide excision repair
oml04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112163492 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
112163492 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oml03051
]
112163492 (rad23b)
03400 DNA repair and recombination proteins [BR:
oml03400
]
112163492 (rad23b)
Proteasome [BR:
oml03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112163492 (rad23b)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
112163492 (rad23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
Metal_resist
Dsc3_N
CUE
UBA_3
OTU1_UBXL
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
112163492
NCBI-ProteinID:
XP_024155685
Ensembl:
ENSOMEG00000008426
LinkDB
All DBs
Position
LG12:9113578..9119288
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AA seq
395 aa
AA seq
DB search
MLITLKTLQQQTFKIDIDEEETVKTLKERIEQEKGKESFSVAGQKLIYAGKILSDDTALK
EYKIDEKNFVVVMVTKPKTAAASPKPSSASSSAPSSAPSAAAPAAAPAPSPTADKPAEVT
PADKPEEKESSTSEPPPPTPPVRSSESSTDLLSEAVSTLVTGSSYDTMVNEMMLMGYERE
QVVAALRASYNNPDRAVEYLLSGIPGRDQGPRTGPDSTPAVSESPAAPAGGTAAPASTES
SPSAGGGNPLGFLRNQPQFHVMRQLIQQNAALLPALLQEIGRENPELLQEISNHQEQFIQ
MLNEPNPDPVPGGGGGGGGVGGGGGGARGAGGTGADPSGGSHMSYIQVTPQEKEAIERLK
ALGFPEGLVIQAYFACEKNENLAANFLLQQNFDDD
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgctgataactttaaagactttacaacagcagacgttcaaaatcgacatcgatgaggaa
gaaacggtgaaaacattgaaggagaggatcgagcaggaaaaagggaaggagagcttttca
gtggccggccagaagctgatctatgctggaaaaatcctcagcgatgacacggccctcaaa
gaatacaaaatcgatgagaagaactttgtggtcgtcatggtgacaaagcctaaaactgct
gctgccagcccaaagccttcatcagcctcgtcatcagctccctcatcggcccccagcgct
gcagctcctgcagcggccccagctccatcgcccactgcagacaaacctgcagaagtaaca
cctgctgacaaaccggaggagaaagagtcttccacgtctgagccgccgccgccaacgcct
cccgtcaggagctccgagtcttccacagacctgctcagtgaagctgtttccactctggtg
acgggttcgtcctacgacaccatggtgaacgagatgatgctgatgggctacgagagggag
caggtggtggctgctctgagggccagctacaacaaccccgacagagccgtggagtacctg
ctctcaggtattccgggtcgagatcaaggccccagaaccggacccgattccacacctgca
gtgagcgaatctccagctgcgcctgcagggggcaccgctgctcctgccagcaccgagtcc
tcccccagtgcaggaggaggaaatcctctgggcttcctcagaaaccagcctcagttccac
gtcatgcggcagctgatccagcagaacgccgcgctgctcccagctctcctgcaggagatc
ggtagggagaacccggagctgctgcaggagatcagcaaccaccaggagcagttcatccag
atgctgaacgagccaaaccctgatccagtgcctggaggaggaggaggaggaggtggggtt
ggaggtggaggaggaggagcgaggggggctggaggcacgggggccgacccttccggagga
agtcacatgagctacatccaggtcacaccgcaggagaaggaggccatcgagaggctgaaa
gccctgggattcccagagggactcgtcattcaggcctacttcgcttgcgagaagaacgag
aacttggcggccaacttccttctacagcagaactttgacgacgattaa
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integrated database retrieval system
