KEGG   Oryzias melastigma (Indian medaka): 112163499
Entry
112163499         CDS       T07439                                 
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41
  KO
K23610  WD repeat-containing protein 41
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112163499 (wdr41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112163499 (wdr41)
Membrane trafficking [BR:oml04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    112163499 (wdr41)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WDR55 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_DCAF12 CPSF_A Beta-prop_RIG_2nd Beta-prop_IP5PC_F Beta-prop_IFT140_1st WD40_RFWD3 WD_LRWD1
Other DBs
NCBI-GeneID: 112163499
NCBI-ProteinID: XP_024155693
Ensembl: ENSOMEG00000017120
UniProt: A0A3B3CDY0
LinkDB
Position
LG12:complement(3290061..3299564)
AA seq 448 aa
MLRWFLGGREAQSSVERSGVLSIGEEQPRNCFTELQVLKGHFDIVRFLVQIDDFRCASAG
DDGLVLVWNIETGERLQELRGHAQQITAIIAFTCEASAHTALITASSDRSVSLWDPDSGN
RVQTVSDLQSSVKCLLGLERLCLWVSGGEELCVWSKDFQLRCLHQKHGDSGVTALIELPK
NHLAAAVDREIVIYRLTLSEDSDVSLTKIRCLSDHRDQIRALINVNDRLFASGSHAGELI
LWDAVDWNNLKYEHILWEESQPGAQSEIRMKAPRPSEMSIQHLTTNGQLILAAVGSGLYV
YDLQSKSVAAYRKAAHDSNVLHTLLLSDSELMSCSEDGSVRIWEIQDLPLPAEPASAGFF
GTWTFSRSHKQSAPQSKKVTDFPNTRKLELIGDLIGHSGAVQMFVSFGEDGLVTCSADHL
LILWKDGERQSRLRSQALFQKLEENGGL
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgcttcggtggtttctgggaggtcgagaggcgcagagctcagtggagagaagcggcgtg
ctgagcatcggagaggaacagcccagaaactgcttcactgagctgcaggtgctcaaagga
cattttgacatcgttcgatttctggtgcagattgatgacttcaggtgtgcgtctgcgggc
gacgacgggctggtcctcgtctggaacatcgagaccggcgagaggctgcaggagctgaga
ggccacgcccagcagatcaccgccatcatcgccttcacctgcgaggcctccgcccacacg
gcgctcatcaccgcctcctccgaccgcagcgtcagcctgtgggatcccgactccggaaac
cgagtccagacggtgtcagacctgcagtcctcagtgaagtgtctgctggggctggagcgt
ctgtgtttgtgggtctccggcggggaggagttgtgcgtttggagcaaagacttccagctg
cggtgcctccatcagaaacacggcgacagcggagtaaccgctctgattgagctgcccaag
aaccacctggcagcggcggtggacagagagatcgtcatctaccgactgacgctttccgaa
gactcggacgtgtcgctcactaagatccgatgtctgtcggaccaccgagaccagatccga
gctctcatcaatgtcaacgaccgcctctttgccagcggctcgcacgccggcgagttgatc
ctgtgggacgcggtcgattggaacaacctgaagtacgagcacatcctgtgggaggagtca
cagccaggcgcccaaagcgagatccggatgaaagctcctcggcccagcgagatgtccatc
cagcacctgaccaccaacggacagctgatcctggcggcggtgggcagcggcctgtacgtg
tacgacctgcagagcaaatccgtggcggcctacaggaaggccgcgcacgactccaacgtg
ctgcacaccttgctgctgtctgacagtgagctgatgtcgtgctctgaggacggcagtgtg
aggatctgggagatccaagacttacctttacctgccgagcccgcctctgcaggattcttc
gggacctggaccttcagccgctcacacaaacagtcggctcctcagtccaagaaggtcacg
gacttcccgaacacgcggaagctggagctgatcggagatctcatcggacactcgggagcc
gtgcagatgttcgtcagcttcggcgaggacggcctggtgacgtgctccgccgaccacctg
ctgatcctgtggaaggacggcgagaggcagtcgcggctgcgcagccaggcgctcttccag
aagctggaggagaacggaggtctttga

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