KEGG   Oryzias melastigma (Indian medaka): 118597856
Entry
118597856         CDS       T07439                                 
Name
(RefSeq) protein SOGA3
  KO
K27704  microtubule cross-linking factor
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oml03036]
    118597856
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     118597856
SSDB
Motif
Pfam: SOGA ATG16 bZIP_1 Deam_C YabA ENOX1 Halo_GVPC CCDC113_CCDC96_CC
Other DBs
NCBI-GeneID: 118597856
NCBI-ProteinID: XP_024123012
LinkDB
Position
LG16:complement(12420426..12427398)
AA seq 829 aa
MNPASSDTPRQPDNSSRKQQRSSSPAKESGCKSGQKGNNSAKPKQGGGGGGGGARGSRGH
SPVSAGRERQAGGAPASRGAVAVHAAGAESPTQSRPAQEATDNPLTQRADPSRVVSDQPC
ASKSPKLKSKNPKVGGGGGGGGEASGAKKSSKSAVGCGPGFWKEGCLQTELIQFHLNKSL
GKKGTKMQAKSASPPASEPELSPEPDSPKREPQPDQNLQDEIERLEDENDDLKTEIEEMR
AEMDEMRDTFYEEDACQLQDMRRELERANKNCRILQYRLKKAERKRLRFTETGQVDGELL
RSLEQDLKVAKDVSVRLHHELENVEEKRTKTEEQNEKLRQALIEVEVTKQALQNELDKAK
ELSLKRKGSKDGQRVERRMPQTPVEEENEDLKCQLAFIKEEAVLMRKKMAKIDKEKDRLE
HELQKYRSFYGDVDSPLPKGEAGGPPTTRESELKLRLRLVEEEANILGRKIVELEVENRG
LKAELDDMREESLAAAGVDGSSAGGHQSREQSEALSELRQQLQLVEDEAELLRRNLADVE
EENKKVTSELNKLKYKAGSHEAGSRHGGGGDPAKMEALQEELKAARLQVNELSGKVMQLQ
YENRVLLSNMQRYDLASHLGIRGSPRDSDAESDGGREDDTPMASASSPRLLPPHRKREGP
IGGESDSDEVRNIRCLTPTRSLYSPVDSRFLSRSLKDRQNLIDIRIEAERLGRTIDRLIA
DTSTIIAEARVYVTNGELYARLDEDEEGGRIREHELLYRINAQMKAFRKELQNFIDRLDV
PKQEDKQAEEPLSMFQPIILLILILVLFSSLSYATIFKLVFLFTLFFVL
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgaacccggcatcttccgacactccccggcagccagacaatagcagccggaagcaacag
cgctcttcctctccagctaaggagagtggatgtaaaagtggacagaaaggcaacaattcg
gcaaaacccaagcagggaggaggtggaggaggaggaggagcaagaggcagtcgaggtcat
tctcctgtttctgcgggcagggagcggcaggccgggggcgctcccgccagcagaggcgcg
gtcgctgtccacgccgccggtgctgaaagccccacgcagagcaggccggcgcaggaagcc
accgacaacccccttacccagagagcagatccgagccgggttgtctcagaccagccctgc
gcatccaaatcccccaaactgaagagcaaaaacccgaaagtaggaggaggaggaggagga
ggaggagaggccagcggggcgaagaagagcagcaagagcgcagtgggctgcggacccggg
ttctggaaggaaggatgcttgcaaaccgagctgatacagttccacttgaataagagcttg
gggaagaaggggacgaagatgcaggccaagtctgcatccccaccggcttcagagccggag
ctgtctccggaaccagacagcccaaagcgggagcctcaaccggaccagaacctgcaggac
gagatcgaacggctggaggacgaaaacgatgatctgaagactgaaatcgaggagatgcgg
gcagagatggatgagatgagggacactttctatgaggaggacgcatgccagctgcaggac
atgcgcagagagctggagagagccaacaagaactgtaggatccttcaataccggctgaag
aaggccgagagaaagaggctccggttcacagaaaccggccaagtggatggagaactgctc
agaagtctcgagcaagacctgaaggtggcgaaggatgtgtccgtgcgcttgcaccatgag
ctggagaatgtggaggagaaacggacaaagacagaggagcagaatgagaaactaagacag
gcgctgattgaggtggaagtcaccaaacaggctctgcagaatgagcttgataaggccaaa
gagctctcgctgaaaaggaaagggagtaaagatggacagagagtagaaaggaggatgcca
cagactccagtggaggaggaaaacgaggatctgaaatgccagctggccttcatcaaagaa
gaggccgttctcatgaggaagaagatggcaaagatcgacaaagagaaggatcggctcgag
cacgagctccaaaagtacaggtccttctacggagacgtggacagccctctgcctaaaggc
gaagccggggggccccccaccacccgggaatccgagctgaagcttcgtctgcgcctcgtg
gaggaggaggcaaacatcctggggaggaagattgtggagttggaggtagagaacagggga
ctgaaggctgaactggatgacatgagagaggaaagtctggcagcagcaggagtggatggt
tccagcgctggaggtcatcagagtagagagcaaagcgaggctctgtctgagctgaggcag
cagctgcagctggtggaagatgaggccgaacttctccgcaggaacttagcagatgtagag
gaggagaacaaaaaggtgacaagtgagctgaataaactcaagtacaaggctgggtctcat
gaggccgggtcaagacatggaggaggaggcgatcctgctaaaatggaggccctccaggag
gagctgaaagcagcacgtctgcaggtcaacgagctgagtggaaaggtcatgcagctccag
tatgagaaccgggtgctgctctccaacatgcagcgctacgacctcgcctcccacctgggg
atccgcggcagtcctcgtgacagtgacgcagagagcgatggggggcgggaagacgacact
cccatggcctccgcatcctctcctcgcctccttccccctcaccgaaaacgcgagggcccc
attgggggggagagcgattcggatgaggtgaggaacattcgctgcctcaccccgacgcgt
tccctttactcacccgtagacagccgttttttatccagaagcctgaaggaccggcaaaac
ttgatagacatccgcattgaggcggagaggctgggccggaccattgacaggctcatcgct
gacaccagcactatcatcgccgaggctcgagtatacgtcactaacggggagctctatgcc
aggctggatgaggatgaagaggggggcaggatcagagagcacgagctgttgtatcgtatc
aacgctcagatgaaagccttcaggaaggagctgcagaacttcatagaccgcttggatgtc
cctaagcaggaggataaacaagcagaggagcctctgtctatgtttcagcccatcatttta
ctgatcctcattctggttctgttttcctccctgtcttatgccaccatttttaaattagtc
tttcttttcaccctgttcttcgttctgtaa

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