Oryzias melastigma (Indian medaka): 118597856
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Entry
118597856 CDS
T07439
Name
(RefSeq) protein SOGA3
KO
K27704
microtubule cross-linking factor
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
118597856
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118597856
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
ATG16
bZIP_1
Deam_C
YabA
ENOX1
Halo_GVPC
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
118597856
NCBI-ProteinID:
XP_024123012
LinkDB
All DBs
Position
LG16:complement(12420426..12427398)
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AA seq
829 aa
AA seq
DB search
MNPASSDTPRQPDNSSRKQQRSSSPAKESGCKSGQKGNNSAKPKQGGGGGGGGARGSRGH
SPVSAGRERQAGGAPASRGAVAVHAAGAESPTQSRPAQEATDNPLTQRADPSRVVSDQPC
ASKSPKLKSKNPKVGGGGGGGGEASGAKKSSKSAVGCGPGFWKEGCLQTELIQFHLNKSL
GKKGTKMQAKSASPPASEPELSPEPDSPKREPQPDQNLQDEIERLEDENDDLKTEIEEMR
AEMDEMRDTFYEEDACQLQDMRRELERANKNCRILQYRLKKAERKRLRFTETGQVDGELL
RSLEQDLKVAKDVSVRLHHELENVEEKRTKTEEQNEKLRQALIEVEVTKQALQNELDKAK
ELSLKRKGSKDGQRVERRMPQTPVEEENEDLKCQLAFIKEEAVLMRKKMAKIDKEKDRLE
HELQKYRSFYGDVDSPLPKGEAGGPPTTRESELKLRLRLVEEEANILGRKIVELEVENRG
LKAELDDMREESLAAAGVDGSSAGGHQSREQSEALSELRQQLQLVEDEAELLRRNLADVE
EENKKVTSELNKLKYKAGSHEAGSRHGGGGDPAKMEALQEELKAARLQVNELSGKVMQLQ
YENRVLLSNMQRYDLASHLGIRGSPRDSDAESDGGREDDTPMASASSPRLLPPHRKREGP
IGGESDSDEVRNIRCLTPTRSLYSPVDSRFLSRSLKDRQNLIDIRIEAERLGRTIDRLIA
DTSTIIAEARVYVTNGELYARLDEDEEGGRIREHELLYRINAQMKAFRKELQNFIDRLDV
PKQEDKQAEEPLSMFQPIILLILILVLFSSLSYATIFKLVFLFTLFFVL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggcatcttccgacactccccggcagccagacaatagcagccggaagcaacag
cgctcttcctctccagctaaggagagtggatgtaaaagtggacagaaaggcaacaattcg
gcaaaacccaagcagggaggaggtggaggaggaggaggagcaagaggcagtcgaggtcat
tctcctgtttctgcgggcagggagcggcaggccgggggcgctcccgccagcagaggcgcg
gtcgctgtccacgccgccggtgctgaaagccccacgcagagcaggccggcgcaggaagcc
accgacaacccccttacccagagagcagatccgagccgggttgtctcagaccagccctgc
gcatccaaatcccccaaactgaagagcaaaaacccgaaagtaggaggaggaggaggagga
ggaggagaggccagcggggcgaagaagagcagcaagagcgcagtgggctgcggacccggg
ttctggaaggaaggatgcttgcaaaccgagctgatacagttccacttgaataagagcttg
gggaagaaggggacgaagatgcaggccaagtctgcatccccaccggcttcagagccggag
ctgtctccggaaccagacagcccaaagcgggagcctcaaccggaccagaacctgcaggac
gagatcgaacggctggaggacgaaaacgatgatctgaagactgaaatcgaggagatgcgg
gcagagatggatgagatgagggacactttctatgaggaggacgcatgccagctgcaggac
atgcgcagagagctggagagagccaacaagaactgtaggatccttcaataccggctgaag
aaggccgagagaaagaggctccggttcacagaaaccggccaagtggatggagaactgctc
agaagtctcgagcaagacctgaaggtggcgaaggatgtgtccgtgcgcttgcaccatgag
ctggagaatgtggaggagaaacggacaaagacagaggagcagaatgagaaactaagacag
gcgctgattgaggtggaagtcaccaaacaggctctgcagaatgagcttgataaggccaaa
gagctctcgctgaaaaggaaagggagtaaagatggacagagagtagaaaggaggatgcca
cagactccagtggaggaggaaaacgaggatctgaaatgccagctggccttcatcaaagaa
gaggccgttctcatgaggaagaagatggcaaagatcgacaaagagaaggatcggctcgag
cacgagctccaaaagtacaggtccttctacggagacgtggacagccctctgcctaaaggc
gaagccggggggccccccaccacccgggaatccgagctgaagcttcgtctgcgcctcgtg
gaggaggaggcaaacatcctggggaggaagattgtggagttggaggtagagaacagggga
ctgaaggctgaactggatgacatgagagaggaaagtctggcagcagcaggagtggatggt
tccagcgctggaggtcatcagagtagagagcaaagcgaggctctgtctgagctgaggcag
cagctgcagctggtggaagatgaggccgaacttctccgcaggaacttagcagatgtagag
gaggagaacaaaaaggtgacaagtgagctgaataaactcaagtacaaggctgggtctcat
gaggccgggtcaagacatggaggaggaggcgatcctgctaaaatggaggccctccaggag
gagctgaaagcagcacgtctgcaggtcaacgagctgagtggaaaggtcatgcagctccag
tatgagaaccgggtgctgctctccaacatgcagcgctacgacctcgcctcccacctgggg
atccgcggcagtcctcgtgacagtgacgcagagagcgatggggggcgggaagacgacact
cccatggcctccgcatcctctcctcgcctccttccccctcaccgaaaacgcgagggcccc
attgggggggagagcgattcggatgaggtgaggaacattcgctgcctcaccccgacgcgt
tccctttactcacccgtagacagccgttttttatccagaagcctgaaggaccggcaaaac
ttgatagacatccgcattgaggcggagaggctgggccggaccattgacaggctcatcgct
gacaccagcactatcatcgccgaggctcgagtatacgtcactaacggggagctctatgcc
aggctggatgaggatgaagaggggggcaggatcagagagcacgagctgttgtatcgtatc
aacgctcagatgaaagccttcaggaaggagctgcagaacttcatagaccgcttggatgtc
cctaagcaggaggataaacaagcagaggagcctctgtctatgtttcagcccatcatttta
ctgatcctcattctggttctgttttcctccctgtcttatgccaccatttttaaattagtc
tttcttttcaccctgttcttcgttctgtaa
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