KEGG   Oryzias melastigma (Indian medaka): 118598730
Entry
118598730         CDS       T07439                                 
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04137  Mitophagy - animal
oml04140  Autophagy - animal
oml04144  Endocytosis
oml04145  Phagosome
oml04148  Efferocytosis
oml05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118598730 (si:dkey-13a21.4)
   04145 Phagosome
    118598730 (si:dkey-13a21.4)
   04140 Autophagy - animal
    118598730 (si:dkey-13a21.4)
   04137 Mitophagy - animal
    118598730 (si:dkey-13a21.4)
   04148 Efferocytosis
    118598730 (si:dkey-13a21.4)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118598730 (si:dkey-13a21.4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    118598730 (si:dkey-13a21.4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oml04147]
    118598730 (si:dkey-13a21.4)
   04031 GTP-binding proteins [BR:oml04031]
    118598730 (si:dkey-13a21.4)
Membrane trafficking [BR:oml04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    118598730 (si:dkey-13a21.4)
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118598730 (si:dkey-13a21.4)
  Exosomal proteins of other body fluids (saliva and urine)
   118598730 (si:dkey-13a21.4)
  Exosomal proteins of colorectal cancer cells
   118598730 (si:dkey-13a21.4)
  Exosomal proteins of bladder cancer cells
   118598730 (si:dkey-13a21.4)
GTP-binding proteins [BR:oml04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    118598730 (si:dkey-13a21.4)
SSDB
Motif
Pfam: Ras Roc MMR_HSR1 RsgA_GTPase Arf Gtr1_RagA AAA_5 AAA_7 Septin AAA_24 AAA_16 IIGP AAA_22 GTP_EFTU AAA_29 FeoB_N AIG1 AAA
Other DBs
NCBI-GeneID: 118598730
NCBI-ProteinID: XP_036067662
UniProt: A0A3B3E163
LinkDB
Position
LG5:complement(175347..180072)
AA seq 204 aa
MTEEKIPTTLKVILIGNSGVGKSSFMNRYVNHRFTNAYRATVGTDFFSKRTVLDGETVIL
QIWDTAGTERFQSLGTPLYRGSHCCMLVFDVTSSASFGALDVWRKEFLVQGEPPDPSDFP
FIVLGNKTDLSDREVSRRKAQQWCEELGAEYFEGSAKADMDVEQPFKRAAQLALQQYKKH
TLENTGHFRITCEQPRKTRDTCMC
NT seq 615 nt   +upstreamnt  +downstreamnt
atgacggaagaaaagattcctaccacgctgaaagtaatcctcataggaaactcgggagtg
ggaaagtcttccttcatgaacagatacgtcaatcaccgcttcactaacgcgtaccgggcc
acggtgggaacggacttcttcagcaaaagaaccgttctagacggagagacggtcatcctg
cagatctgggacacagctggcacagagaggttccagtctctgggtacacccctgtacaga
gggagccactgctgcatgctggtgttcgacgtcacttcctctgccagctttggggccctg
gatgtgtggaggaaggagtttctggtccagggggagcccccggatccatcggatttccct
tttatagtcctgggcaacaaaactgacctgagcgaccgagaggtgtcgcgcaggaaggcc
cagcagtggtgcgaggagttaggggcggagtactttgaaggaagcgccaaagcagacatg
gacgtagagcagccttttaagagagcggcccagctcgcccttcagcagtacaaaaaacac
acattggaaaatacaggacatttccggataacctgcgaacagccgagaaaaactcgcgac
acctgcatgtgctga

DBGET integrated database retrieval system