Oryzias melastigma (Indian medaka): 118598730
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Entry
118598730 CDS
T07439
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein rab7
KO
K07897
Ras-related protein Rab-7A
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04137
Mitophagy - animal
oml04140
Autophagy - animal
oml04144
Endocytosis
oml04145
Phagosome
oml04148
Efferocytosis
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118598730 (si:dkey-13a21.4)
04145 Phagosome
118598730 (si:dkey-13a21.4)
04140 Autophagy - animal
118598730 (si:dkey-13a21.4)
04137 Mitophagy - animal
118598730 (si:dkey-13a21.4)
04148 Efferocytosis
118598730 (si:dkey-13a21.4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118598730 (si:dkey-13a21.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
118598730 (si:dkey-13a21.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
118598730 (si:dkey-13a21.4)
04031 GTP-binding proteins [BR:
oml04031
]
118598730 (si:dkey-13a21.4)
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
118598730 (si:dkey-13a21.4)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118598730 (si:dkey-13a21.4)
Exosomal proteins of other body fluids (saliva and urine)
118598730 (si:dkey-13a21.4)
Exosomal proteins of colorectal cancer cells
118598730 (si:dkey-13a21.4)
Exosomal proteins of bladder cancer cells
118598730 (si:dkey-13a21.4)
GTP-binding proteins [BR:
oml04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
118598730 (si:dkey-13a21.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
MMR_HSR1
RsgA_GTPase
Arf
Gtr1_RagA
AAA_5
AAA_7
Septin
AAA_24
AAA_16
IIGP
AAA_22
GTP_EFTU
AAA_29
FeoB_N
AIG1
AAA
Motif
Other DBs
NCBI-GeneID:
118598730
NCBI-ProteinID:
XP_036067662
UniProt:
A0A3B3E163
LinkDB
All DBs
Position
LG5:complement(175347..180072)
Genome browser
AA seq
204 aa
AA seq
DB search
MTEEKIPTTLKVILIGNSGVGKSSFMNRYVNHRFTNAYRATVGTDFFSKRTVLDGETVIL
QIWDTAGTERFQSLGTPLYRGSHCCMLVFDVTSSASFGALDVWRKEFLVQGEPPDPSDFP
FIVLGNKTDLSDREVSRRKAQQWCEELGAEYFEGSAKADMDVEQPFKRAAQLALQQYKKH
TLENTGHFRITCEQPRKTRDTCMC
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagaaaagattcctaccacgctgaaagtaatcctcataggaaactcgggagtg
ggaaagtcttccttcatgaacagatacgtcaatcaccgcttcactaacgcgtaccgggcc
acggtgggaacggacttcttcagcaaaagaaccgttctagacggagagacggtcatcctg
cagatctgggacacagctggcacagagaggttccagtctctgggtacacccctgtacaga
gggagccactgctgcatgctggtgttcgacgtcacttcctctgccagctttggggccctg
gatgtgtggaggaaggagtttctggtccagggggagcccccggatccatcggatttccct
tttatagtcctgggcaacaaaactgacctgagcgaccgagaggtgtcgcgcaggaaggcc
cagcagtggtgcgaggagttaggggcggagtactttgaaggaagcgccaaagcagacatg
gacgtagagcagccttttaagagagcggcccagctcgcccttcagcagtacaaaaaacac
acattggaaaatacaggacatttccggataacctgcgaacagccgagaaaaactcgcgac
acctgcatgtgctga
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integrated database retrieval system