Oryzias melastigma (Indian medaka): 118599119
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Entry
118599119 CDS
T07439
Name
(RefSeq) glutamate receptor ionotropic, delta-2-like
KO
K05207
glutamate receptor delta-2 subunit
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118599119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
118599119
Ion channels [BR:
oml04040
]
Ligand-gated channels
Glutamate (ionotropic)
118599119
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
DUF6724
Lig_chan
rve_3
DUF3855
Motif
Other DBs
NCBI-GeneID:
118599119
NCBI-ProteinID:
XP_036069350
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Position
LG9:complement(10851372..10927026)
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AA seq
510 aa
AA seq
DB search
MDLTSGFYNIPMCEEDKRYTAFTTPVGLYEYNRMPQGLLNSPALFMRMMLNIFGNLNFTS
LLCYLYDLLVFAPTEEEALLRLHVVFQKLRDNHLKLSPKKFNFLRRSVKFLGHFIDQHGA
SVDPSRVAMISNMPKESLMDVDGVAKSHTTAYHPMGNGGTERFNRTLAPIQPRFSQTLQM
LQKWPSSMPLINKNTKQKVFWWTKKKMLPLISYQSLSVLTVTHKVKYGRFGFIWDAAVLE
YVANNDEDCSFYTVSNSASDRGYGIAMQDGSPYRDIFSQRILELQQNGDMDLLKLKWWPK
DTPCDLYSSVQTRQRGNALDIHSFAGVFCVLAAGVVLSCLIAMVESWWSRRKGSRVPSKE
DDKEIDLEHLHHRVNSLCTEDESPHKQFSTSSVDLTPLDMDALPAARQALEQISDFRNTH
ITTTTFIPEQIQTLSRSLSAKAAAGFSSGFGGGGGLQDHRTGGVGPFRQRAPNGGFFRSP
IKTMSSIPYQPTGPGPNFGYGNDPDRGTSI
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacctaacatcagggttttataacatccccatgtgtgaagaagacaagcgctacact
gccttcactacacctgttggtctatacgagtacaacagaatgccccaaggactccttaac
agccctgcattgttcatgcgcatgatgttgaatatctttggaaacctcaacttcaccagt
ctactctgctacttgtatgatctgctagtttttgcccctactgaggaagaagctcttcta
agactgcatgtcgtcttccagaagctgagggataaccatctcaagctgagtccaaagaag
ttcaattttctgcgcaggtctgtcaagttcttgggacattttattgaccagcatggagcg
tcagtggatccgtccagagtggccatgatctccaatatgcccaaggagtctctgatggat
gtggatggtgtggccaagtctcataccaccgcctaccaccctatgggcaacggaggaaca
gagcgttttaaccgcaccttagcccctattcagccacgcttctcacaaaccttgcagatg
ctgcaaaagtggcccagcagcatgccactcatcaacaagaacaccaagcaaaaggtgttt
tggtggaccaagaagaagatgttgcccctgatctcctaccagtccctgtcagtgctgact
gtgacccacaaggtgaaatacggccggtttggcttcatctgggatgcggccgtgttggag
tatgtcgccaataatgacgaggattgttccttctacaccgtcagcaacagcgcatcagac
cgtggatacggtatcgccatgcaggacggcagcccctacagggacattttctcccagaga
atcctagaactccagcagaacggggacatggatttactaaagctcaagtggtggcccaag
gacactccctgcgacctgtacagttcggtccagacacggcagcgcggcaacgccctcgat
atccacagcttcgctggcgtcttctgcgtcctggcagccggcgtggtcctctcctgcctc
atagcgatggtggaaagctggtggtcgcggcggaaggggtccagagtcccttccaaggag
gacgataaggagatcgacctggagcacctacaccacagggttaacagcttgtgcaccgag
gatgaaagcccccataagcagttctccacctcgtccgtagatctgacccctctcgacatg
gatgcgctgcccgctgctcgtcaagcacttgagcagatcagcgatttccgcaacacccac
atcaccaccaccaccttcatccccgagcagatccagacccttagccgtagcctttctgcc
aaagctgccgctggattctcctccggttttggtggtggaggcggtctccaggaccaccgg
actggtggggttgggcctttccggcagagggcccccaatggtggcttcttccgcagcccc
attaaaactatgtcctccattccctaccagcccacaggtccaggacccaactttggatat
ggcaatgatccagataggggcacctccatataa
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