KEGG   Oncorhynchus masou masou (cherry salmon): 135503718
Entry
135503718         CDS       T10723                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2
  KO
K24823  protein PAT1 homolog 2
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:omm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omm03019]
    135503718 (patl2)
Messenger RNA biogenesis [BR:omm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     135503718 (patl2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 135503718
NCBI-ProteinID: XP_064777934
LinkDB
Position
18:complement(51076798..51093238)
AA seq 718 aa
MAVLSTADVTLVFSSLCTFFQETETAVSQPQWPENGGQWSDEEGGAGMDECGLAEMAEED
EEIDIYNNETFGMDMDTEVGDTEGDPTNPLFQFGEKPPAPPALPSLSPSSPSFSPRARPQ
LRVQGPPGRRGRGQRGGQAMAQMFEDPAVVRTVEGRPSLQSLDSAIVDVGSVSYWDDLDP
DAWMLSSYERTRHASGSVLQDPAIVCVMDSHAPGRGPNYLDSHYPFSNSSGRRGGLRGSY
SNRPFGQRCPSQINTMLPSSPIVSRRPFTTQQPYNQVGGFPSPRPCPSTPQPLTPKMMQL
RFGANSPRPSPFYSPSSNRVQRFRFPGPVTQLHPQHRRLLSQRQQRSQRKPDSWDPYCNL
MSAKEKEWIIRLQMIQLQSENPHLDDYYYQEYYRRMEAKLAEEELGMRGKREPPKLTTPY
VTKMDSYTPVVHIEGSLGQVAVSTCFSPRRAINAVAAHCPHEELKDIRQQRLDVLKKIEK
LFMVLLEVEEGQRMKAQVLGEGEEKGLMEKTEIKVEYIYSQLQHPDLEAGEEFLPCLLVS
KGKQLLARLLPFLSHDAALKVLSMVTSHLPVLMSRDADESLPVLYPSLRIVIGGMTFSQL
IGVLKDFTASLPDSSDGSVCLSLVCQSKFGLSLLYALLSQGERLLSSDVPLEPSIGDFET
WTDTVFLVASQLSQSALVEPLLLPSNLLTLFCRYLDKRTIHQLKSNMESATGYLAPPS
NT seq 2157 nt   +upstreamnt  +downstreamnt
atggcggtactatcgacagcagatgtcaccctcgtattttcctccctctgtactttcttt
caggagactgaaaccgcagtctctcaacctcagtggccagagaacggaggccaatggagc
gatgaagaagggggggcaggcatggacgagtgtggattggcagagatggcagaggaggat
gaggaaatagatatctacaacaatgagacgtttggaatggatatggatacagaagtcggg
gacacggaaggggatcccactaaccctctgttccaatttggagagaagccacctgcccca
cctgccttgccatccctctcccctagctccccctccttctctcccagggcccggccacaa
ctccgtgtccagggccctccgggccgacgaggaaggggacagaggggaggtcaggccatg
gcgcagatgtttgaagacccagctgtggtgaggactgtggaggggcgaccaagtttgcag
agcttagacagcgctatagtggacgttgggagcgtctcctactgggatgatctagatcca
gatgcttggatgttatcatcttatgagagaaccagacacgcctctggatcagtattgcag
gacccggccattgtgtgtgtgatggacagtcatgcccctggcagaggaccgaactacctg
gactctcactacccgttctccaactcaagtgggaggagagggggcctaagagggtcatac
tcaaatagaccatttgggcaaagatgcccatctcagattaataccatgttgcccagctct
cccatcgtctcccggcgacctttcaccacacaacagccatataaccaggtggggggcttc
ccctcgccacgtccctgcccctccacccctcaacctttaactccgaaaatgatgcagctt
cgctttggtgcaaactccccaagaccctctcccttctacagcccctcgtcaaatcgtgtg
cagcgattcaggttccctggtccagtgacacagcttcacccccaacacagacgactgttg
agtcaaaggcaacagagatcccaaagaaaaccagacagctgggacccctactgtaacctc
atgtcggctaaagagaaagagtggatcattagactacagatgattcagctccagagcgag
aatccccacctggacgactactactaccaggagtactatcggcgaatggaggccaagctg
gcagaggaggagttgggcatgcggggcaagagggagccacccaaactcaccaccccctat
gtcaccaagatggactcttacaccccagtggtgcacatcgagggttccctaggccaggtc
gccgtgtcgacgtgtttctctcctcgacgagcgatcaatgcagttgcagcccactgtcca
catgaggaactgaaagacatcaggcaacagcgattggatgtcctaaagaaaatagaaaag
ttgttcatggtgctgctggaggtagaagaggggcagaggatgaaggcacaggtgctgggg
gagggtgaggagaaggggctgatggagaaaactgagataaaagtggagtacatctactcc
cagctacagcatcccgacctagaggcaggggaagaatttctgccatgtctcctggtgtcc
aaaggaaagcagctactggctcgactcctccccttcctttcccatgacgccgcgttgaaa
gtcttaagcatggtgacatctcacctgcctgtactcatgagcagagatgcagatgagtct
cttccagttttgtacccgtctcttcgaattgtgatcggaggcatgaccttcagtcagctt
attggggtccttaaagactttacggcatcacttcccgactccagcgatggcagcgtgtgc
ctctcacttgtctgccaaagcaagtttgggctctccttactctacgctctgctgtcccaa
ggagaaaggcttctgtcctctgatgttcctctggagcccagcattggtgactttgaaacc
tggacagacacagtcttcctggtggcatcgcagctatcccagagtgctctggtggagccc
cttctcctaccctcgaaccttctcacactcttctgccgctacctggacaagcgtaccatc
caccagctgaagagcaatatggaatctgcgactggatacctggctcctccgtcgtag

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