Oncorhynchus masou masou (cherry salmon): 135503744
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Entry
135503744 CDS
T10723
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135503744
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
135503744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_8
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
ARM_TT21_5th
TPR_6
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
135503744
NCBI-ProteinID:
XP_064777959
LinkDB
All DBs
Position
2:complement(34772073..34781668)
Genome browser
AA seq
1147 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQTKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLAKAGDKMRFDLVLASTEARQCSDLLSQAQYHVARARKQDEEEKE
IRAKQDQERDFLRQQMHKEQEEKRTKLEEDQKKLLEQRAMYVEKTKGLLSFADGMKEERK
EKRKGGGRRKKGDFDEFVNDGSDEDLPVRRRKKRKGGSGSEEEGRRKRRPNKGDGGSDDE
EGGSRPKKQRKPRAGGKKMQKYEPVPPSLKGKIKSKAIISSSDSSSDEDGLKIAEDRNPR
DGGSGSDNEGGHKKRIASDSESDGGRNRSGSDAGSPQHSGNSVSDSGSERPVKRKRVQQQ
SDSEQSDNESKRSRSGSENESRPGSPAAASGSEAGSPACSPHRSDNGSEPEGSAKEASNH
GSGSDSD
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggatcaattgaaatccccttacgggacaccgatgaggtcattgagcttgat
ttcgaccagctgccagaaggagatgaggtcatcagtatcctaaaacaagagcatacacag
ttgcacatatggattgctcttgctctggagtattacaaacagacgaagacggaggacttt
gtcaagctgctggaggcggcccgtatcgatgggaacctggactacagagaccatgagaag
gaccagatgacctgtctggacaccttggcagcctactatgtccagcaggcacgtaaagag
aagaacaaagatgccaagaaggagctcatcactcaggccaccctgctctacaccatggca
gacaagatcatcatgtacgaccagaaccacttgttgggaagagcctgtttctgcctgctg
gagggggacaaaatggaccaggctgacgctcagttccactttgtcttgaaccagtctacc
aataacatccctgctctacttggtaaagcttgcatctccttcaataagaaggattacagg
ggagcactggcctactacaagaaggctctacgcacaaaccctggatgtcctgctgaggtg
aggctggggatgggccactgctttgtcaagctcagtaagctggagaaggcccgtctggcc
tttggccgggccctggagctcaactccaagtgtgtgggagcccttgtgggcttggctgtg
ctggagctcaacagcaaggagcccgactccatcaagaatggagtgcagctcctatccaga
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctggctaaccacttcttc
ttcaaaaaggactacagtaaagtgcagcacctggctctccatgcctttcacaacacagag
gtggaagcaatgcaggctgagagctgctaccagttggcccgctcctttcatgtacaggag
gactatgaccaggccttccagtactactaccaggccacccaatttgcctcgtctaccttt
gtgctgcctttttttggcctggggcagatgtacgtgtaccgtagagacaaggagaatgca
gcccagtgttttgagaaggtcctaaaggcctaccccaacaactatgaaaccatgaagatc
ctgggatctctttatgctacttcagatgatcaggaaaagagagacattgccaaaggtcat
ctgaagaaggtgaccgagcagtaccctgatgacgttgaggcctggatcgagctggcccag
atcctggagcagaccgacatccagggcgccctctctgcctacggcacggccacccgcatt
ctgcaggagaaggtccaggctgacgtcccccctgagatcctcaacaacctgggggctctc
cacttcagacttgggaacctgggagaggccaagaaatacttcctggcctctttggagcgg
gccaaagctgagggagagcatgacgagcattactacaacgccatctctgtcaccacctct
tacaacctagccaggctctacgaggccatgtgcgaattccacgaggcggagaaactctac
aagaacatcctgagggaacatcccaactacgtcgactgttacctgcgacttggcgcaatg
gctcgtgacaaaggaaacttctatgaagcttccgactggttcaaagaggctctgcagatt
aatcaggatcacccagacgcctggtccctgatcggtaatctccacttggccaagcaggag
tggggtccgggtcagaagaagtttgagcgtatcctcaagcagccgtccactcagaacgac
acctactccatgctggctctgggcaacgtgtggctccagaccctgcaccagcccaccagg
gaccgggagaaggaaaagagacatcaggatcgagccctggccatttacaaacaggtccta
cgaaacgactccaagaacctttacgctgccaacggcataggtgccgtcctggcccataag
ggctactaccgagaggcccgtgacgtgtttgcccaggtgagagaagccacagctgatatc
agtgacgtctggctcaacctggcccacatctacgtggagcagaaacagtacatcagcgct
gtgcagatgtacgagaactgtctgaagaaattctacaagcatcagaacactgaggtgctg
ctgtacctggctcgggcactcttcaaatgcgggaaactccaggagtgcaaacagactctg
ctgaaggcacgtcacgtggcccccagtgacacggtgctgatgttcaacgtggccctggtg
ctgcagaggctggccactctggtgctgaaggatgagaagagtaacctaaaggctgtactc
agtgctgtcaaagagctggagctggcccaccggtatttcagctaccttgccaaggcaggt
gacaagatgaggttcgacctagtgcttgcctctactgaggccaggcaatgctctgacctg
ctgagtcaggctcagtatcacgtggctcgggccaggaagcaggacgaggaggagaaggag
atccgggccaagcaggatcaggagagggacttcctgcgccaacagatgcataaagaacag
gaggagaagagaaccaagctggaagaggatcagaagaagctgctggagcagagagccatg
tacgtggagaagaccaagggtctgctctcctttgcagatggaatgaaggaggaaaggaaa
gagaagaggaaaggtggcggccgacgcaagaaaggggactttgatgagtttgtcaacgat
ggctctgatgaggacctgccagtgagaaggaggaagaagaggaagggtggcagcgggagt
gaggaggagggccgtaggaagaggagacccaacaaaggtgacggtggcagtgatgatgag
gaaggaggctcacggcccaaaaagcaacgcaaacccagagcgggcggaaagaagatgcaa
aagtacgagcctgtgccaccatctctcaaaggcaagatcaagtcgaaggccatcatctca
tcctccgactcttcatcagacgaggatggactgaaaattgctgaagacagaaaccccaga
gacggtggttcaggctctgataacgagggcggccacaagaagcgcatcgcctccgacagt
gagtccgacgggggccggaaccgctctggcagcgatgctggaagcccccaacactccgga
aactcggttagtgactcaggcagcgaacgtccagtgaagaggaagagagtgcagcagcag
tctgactcagagcagtctgataacgagagcaagaggagccgctctgggtcggagaacgag
tcccgacctggctcaccggccgcagcctctggctctgaagctggttctccggcatgctcc
ccacaccgctctgacaacggatcagaaccagagggctctgccaaagaggcctccaaccat
ggctctggctctgacagtgactga
DBGET
integrated database retrieval system
