Oncorhynchus masou masou (cherry salmon): 135503830
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Entry
135503830 CDS
T10723
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135503830
Transcription factors [BR:
omm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135503830
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
135503830
NCBI-ProteinID:
XP_064778052
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All DBs
Position
2:34483535..34502101
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AA seq
627 aa
AA seq
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MNICGELMADQRMDISSTMNEFLSPGSTDLISSIGTPGMDYTRKRKSSTTDYQIDDFSFE
DSMDTGNDRLGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGAANPYTEAIYKPAFLSDDELKHLILRASDGFLFVVGCDRGKILFVS
ETVYKILNFSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDSKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPLIKMEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDDDNEPDNEGCNLSCLVAIGRLHPHIVPQPMNNEIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGSF
ITLRSHWFSFMNPWTKEVEYIVSTNTVVCGSVPEGSDGIYPQLAASPQSMDSVLTDGNGK
RALQTVPGIPGGTRAGAGKIGRIIAEEVMEIQRIRGSSPSSCGSSPHNFTSTPPPDMSSP
GGKKIQNSGTPEHPSAGLIPGPDSVGYPYSNNSNLSDNSHIGIDIMDEPGSSSPSNDEAA
MAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttgtggtgaactaatggcagaccaaagaatggacatttcctccacgatgaac
gagttcttgtctcccggctccactgatctaatcagctcgatcggcacacccggcatggac
tacacacgcaagagaaaaagcagcaccacagactaccaaattgatgacttttcttttgag
gatagcatggacacaggcaatgatagacttggtgatcatcaaggccggataaaaaatgcc
agggaggcccacagtcagattgagaagagacgcagggacaagatgaacagcttcatagac
gagctggccgcactagtgcctacatgcaacgctatgtcccgtaaactggacaaactaaca
gtcctgcgcatggctgtccagcacatgaagaccttaagaggtgctgctaacccctacact
gaagctatctacaaaccagccttcctgtcagacgacgaactgaagcacttaatactgagg
gcatctgatggctttctgtttgttgttggctgcgatcgcgggaagatactgtttgtttcg
gagacggtctacaaaatcctaaacttcagccaaaatgacctgattggccagagcctattt
gattacctgcatcctaaagacattgccaaagtcaaggagcagctgtcctcatcggacacg
gcgccgcgggagcgcctcatcgattccaaaactggccttccagtaaagacagacattacc
cccggcccatccagactttgctctggagccaggcgatccttcttctgcaggatgaagtgc
aatcggcccctcatcaaaatggaggacaaggacttcccatccacctgctccaagaagaaa
gctgaccgtaagagcttctgcacaatacacagtactggctacctgaagagctggccgcct
accaagatgggtctggatgacgacaatgaaccagacaacgagggctgcaacctcagttgt
ctggtggccattggacggctgcatccccacattgtccctcagccaatgaacaatgagatc
cgtgtcaagcccactgagtatgtctcgcgccatgccatcgacgggaagtttgtctttgtt
gatcagagggccactgccattttggcttatctaccccaagagttgctgggtacatcgttt
tatgagtactttcatcaagatgacatagggcaccttgcggaatgtcatagacaagtgctc
cagatgcgggagaagatcaatacaaactgctacaagttcaaaataaaagacggctccttt
atcacgctgaggagtcactggttcagttttatgaacccttggaccaaagaggtggagtac
attgtctccaccaacactgtggtctgcggcagcgtgcctgaaggatctgatggcatctat
cctcagctcgctgcctccccccagagcatggatagtgtactcacagacggaaacgggaag
cgggccctccagactgtgcctggcatccccggtggcacaagggcaggggcgggaaagatc
ggccggataatcgcagaggaggtgatggagatccagaggataagaggttcctcgccctcc
agctgtggctccagtcctcacaacttcaccagcactccacccccagacatgtcgtcccca
gggggaaagaagatacagaacagtggaactccagaacatccctcagcagggctgataccg
ggaccagactctgtaggctatccatactccaacaactccaatctaagtgataactctcac
attggcattgacatcatggatgagccaggctccagtagcccgagtaatgacgaggcagcc
atggctgtgatcatgagccttctggaggcagacgcagggttgggaggcccagtggacttc
agtgacctgccctggccactgtga
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