Oncorhynchus masou masou (cherry salmon): 135503853
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Entry
135503853 CDS
T10723
Symbol
hcfc1b
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1b
KO
K14966
host cell factor 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03083
Polycomb repressive complex
omm04980
Cobalamin transport and metabolism
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135503853 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
135503853 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135503853 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135503853 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135503853 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
omm03029
]
135503853 (hcfc1b)
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135503853 (hcfc1b)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
135503853 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
135503853 (hcfc1b)
MLL-HCF complex
135503853 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
135503853 (hcfc1b)
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
135503853 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
135503853
NCBI-ProteinID:
XP_064778090
LinkDB
All DBs
Position
18:3725662..3781287
Genome browser
AA seq
1945 aa
AA seq
DB search
MTSGTSGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTA
TNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKP
KSPKNGPPPCPRLGHSFSLVGNKCFLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVV
GWDIPITYGVLPPPRESHTAVVYTEKTSSKSRLVIYGGMSGCRLGDLWTLDIDTLTWNKP
SINGTAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMA
WESVLMDSLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPR
PPSRVQLVRANTSSLEVSWGAVPTADTYLLQLQKYDIPXSATTTPGVSPATSLPVNSPKS
PVTAPAASAQGLPLQGITLVPSPTTTMPGSPLAAANARGPAILKVSAPHSTTGTSIVTVR
QANQGGKSPVTVTSLPAGVRMVVPAQGAQGTPMGSSPQMSGMAALAAAAAATQKIPPSTA
TMQLPAGATMVKTVAMSPGSQTVKVASPVMVSNPATRMLKTAAAQVGTSGVVTPGTPSRP
IITVHKSGTVTVAQQHQVVTTVVGGVTKTITLVKSPLTMGGGGTLLTAANQGQNKVMSGK
DVQHWLSNLSNLGKVMSVVQTKPGQTGAVTGQAGSSLQHIIQTKGPLPAGTILKLVTSAD
GKPTTIITTSQAGTAGGKPTILSYSGMPTTTKPGTHIIKTIPMSAIGQAGVTGSGMKSPI
TIITTKMMTPGTGTPGKIISAMPRAGAGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVS
PVTVSGVKPNVTTLVVKGTTGVTTFGTVTGTVSSSLAGGSVATATPITTLGTMTALPGQV
TVSAAQAGAQPTQVTLITTPSGVDAQPVHDLPVSILSSPTSADPSSTQPEAGDPGTVTLV
CSNPPCETHETGTTNTATTASANMTGNGGVERVCSNPPCETHETGTTNTQTTASSNMGQV
QQVCTNPPSETHETGTTNTQTTASSNMGQVQQVCTNPPSETHDTGTTNTQTTASCNMGSN
QQQQGSCVTNNTSGSDPPSSPPPSSSGDLSPSAVSGTSSVPGVLRPETLRTGTTYTSTTA
RSNMGSDQMGMTLSSSSSDNQSKSSSGGGGGGGPPLTSPVCSSPPCETHQTGTTTTSTQA
NSSMGIGQTTGTVQRVCSNPPCETHETGTTNTPSQTTSNQTGTGTVQRVCSNPPCETHET
GTTNTATTAQPGDSTQGDNGTTEAPSSSSVTTESSAVVAAGRAVTTVTQSTPTPGPSVPE
ISSMSGSSEAMVAACIEGEEAMQTDCLPEGTVRVVTLEEAAAAGIQVHVEGMEEQNQEEQ
EGLPAELMSEGDAGGQQTLMVTGLTPEELAVTAAAEQAAQHAAAEEANAQAMAIQAVLQA
AQHAVMNEGDSGQEGQHQTTTIPIVLTQAELAALVHQQQQLQEAQALAQAAAAAAAAAQH
NQPTEGLAPADSLNDPESESNGQELAAAVTQAVARLAPTCTMVVTNPGKTQPMMVATPAK
TQPMMVATPAKTQPMMVATPAKTQPMMVATPAKTQPMIVATPAKTQPMMVATPAKTQPMM
VATPAKTQPMMVATPAKTQPMMVATPAKTQPMMVATPAKTQPMMVASPAKTQPMMVASPA
KMQAAATLAEVANGIESAAGRQGAPPVVAKAPVKKDNQWFDVGIVKVTNTVVTHYYLPTD
DQASVDDDSGAIPDYSQMRKMDLQPGTAYKFRVAGINTCGRGNFSEVSAFKTCLPGFPGA
PCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSAQSGEQAKPTTTTTPAQLAFMR
VFCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQEIGKDGVAA
KPTAKRPGSSPDMKAAGPKKARSDQ
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgggacctctggctcagttctgcagccacggtggaagcgggtgttgggttgg
tccggccctgtccctcggccccgacacggacatcgtgcagttgcaattaaagaattgatg
gtcgttttcgggggtggcaatgaaggaattgtggatgaactgcatgtgtataacacagcc
accaatcagtggttcattcctgctgtccgtggcgacatcccgcctggctgtgctgcgtat
gggttcgtgtgcgacggcaccaggctgctggtgttcggagggatggtggagtatggcaaa
tacagcaacgatctgtatgaactgcaggccagtcgctgggagtggaagcgtctgaagccc
aagtctcctaagaacggccctcctccctgtccccgcctgggacacagcttctccctggta
gggaacaaatgcttcctgtttggaggactggctaacgacagcgaggaccccaagaacaac
atccccagatacctgaacgatttgtacacgttggagctgcgtgccggctccagtgtggtg
ggctgggacatccccatcacctacggggtgttgcccccgcccagagagagccacactgcc
gtcgtctacacagagaagacctctagcaagtcccgtctggtcatctatgggggtatgagt
ggctgtcgactgggggatttgtggacactagatatagacaccctgacatggaataaaccg
tcgatcaacgggacagctcctcttccccgcagtctccactctgccaccaccatcaccaac
aagatgttcgtgttcggcggctgggttcccctggtgatggatgacgtcaaagtagcgaca
cacgagaaggagtggaagtgcacgaacacactggcctgtctcaacctagactcgatggcg
tgggagtcggtgctgatggattctctagaagataacatccccagggccagggccggtcac
tgctccgtggccatcaactcacgcctctacgtctggagcggacgggacggataccgcaag
gcctggaacaaccaggtgtgctgtaaggacctctggtacctggagacagagaagccccgc
cccccgtcacgggtccagctggtgagagccaacaccagtagcctggaggtgagctggggc
gcggtacctactgcagacacctacctgttacagctgcagaagtacgatatccccncctca
gccactaccacgcccggtgtcagccccgcgacgtcactaccggtcaactcccccaagagc
cctgtcacagcccctgcagcgtccgcccagggcctgcctctccagggcataacgctggtc
ccctcccccacgaccacaatgcctgggagtccactggctgctgcgaatgcacgcgggcca
gctatcctgaaggtgtctgctccccattccaccacaggcacctccatcgtcacggtgagg
caggccaaccagggcgggaaatctcccgtaacggtgacatcacttcctgccggggtccgc
atggtggtgccggcccagggtgcacagggaacgccaatgggcagcagccctcagatgagt
ggcatggctgcattggctgcagcggctgctgccacacagaagatcccgccctccacggcc
accatgcaacttccagctggtgctactatggtcaagaccgtggccatgagccccggttca
cagactgtcaaagtagcctcgcctgttatggttagtaacccagcaacccgcatgctgaag
actgctgcggctcaggtgggcacgtcaggtgttgtcacacccggaacgccttctcgccct
atcatcaccgtgcacaagtctggcacggtgacggttgcccagcaacaccaggtggttacc
acggtagtgggaggagtcaccaagacaatcacccttgtcaagagtccccttactatgggg
ggaggtggaacactgctgaccgcggccaaccagggtcaaaacaaagtgatgtctgggaag
gacgtgcagcattggctgtctaacctgtccaacctggggaaggtgatgtccgtggtccag
accaagcctggtcagacaggagcggtgacgggacaggctggctccagcctccagcacatc
atacagacgaaaggtcccctcccggcgggcaccatcctgaagctggtgacctcagcggac
ggcaagcccaccaccatcatcactacgtcccaggctgggaccgcggggggcaagcccacc
atcctatcctacagcggcatgcccaccaccaccaagcctggcacgcacatcatcaagacc
atacctatgtctgccatcggacaagcaggagtgacaggaagtggtatgaagtcccccatt
accattatcaccactaagatgatgacaccaggcaccgggacaccaggcaagatcatcagc
gcaatgcccagagctggggctggtcagcagggactcacacaggtggtgctgaagggtgcc
cctggacagcccgggactattttacggaccgtccccatgggaggagtacgtctcgtctcc
ccggttactgtttccggtgtcaaacctaacgtcaccacccttgttgtcaagggaaccaca
ggcgtgacaacgtttggtacggtgactggtacagtgtcttcgagcctggcgggtggaagt
gttgccacggctactcccatcacgaccttgggcaccatgaccgctctgcctggacaggtc
accgtctccgcagcgcaggcgggagctcagcccactcaggtgaccctgatcacgaccccc
agtggtgtggatgctcagcctgtccacgacctcccggtctccatcctgtcctcccccacc
tccgccgacccctcgtccacccagcccgaggcaggcgacccaggaacggtaaccctggtc
tgctcaaacccaccctgcgagacccacgagaccggcactaccaatacagctaccacggcc
tccgctaacatgactggtaatggtggggtggagagggtgtgttcaaacccgccgtgcgaa
acccacgagaccggcaccaccaacactcaaacaacagcgtcctccaacatgggccaggta
cagcaggtgtgcaccaacccgccgtcagagacccacgagaccggcaccaccaacactcaa
acgacagcgtcctccaacatgggccaggtacagcaggtgtgcaccaacccgccgtcagag
acccacgatacaggtaccaccaacacccagaccaccgccagctgtaacatgggatccaac
cagcaacaacagggctcctgtgtaaccaacaacaccagcgggtctgatcccccgtcctct
ccgcccccctcctcctccggagacctctcgccgtcggctgtttctggtaccagctctgtg
cccggggtgctgcgaccggagactctgagaacagggaccacctacacctcgaccaccgca
cgctctaacatgggctctgaccagatgggcatgacgctcagctcctcgtcctcagataac
cagagcaagtcatccagcggaggaggaggaggaggaggaccccccctcacctctcctgtc
tgctccagtccaccttgtgaaacgcaccagactggcactaccactacgtcgacgcaagcc
aactccagtatgggcatcgggcagactacagggacggtccagagggtgtgttccaatccg
ccgtgtgaaacacacgaaacgggcaccaccaacaccccgtctcagacaacgtccaaccag
accgggacgggcacggtccagagggtgtgttccaatccgccgtgtgaaacgcacgaaacg
ggaaccaccaacacggcgactacagcccagcctggtgactcgacacagggagacaacgga
actacagaggctccctcgtcgtcctcagtaaccacagagtccagcgccgtggtggcggct
ggccgagcagttaccacggttacccagtccacacccacacctggaccctctgtacctgag
atctcgtcgatgtctgggtcgtctgaggcgatggtggcggcatgtatagagggagaggag
gccatgcagacggactgtctcccagagggcacagtgagggtcgtgaccctggaagaggct
gctgcagctgggatacaggtccatgtggagggcatggaggaacagaaccaggaggagcag
gagggcctgcctgcagagctgatgtctgaaggtgacgcagggggccagcagaccctgatg
gtgacgggtttaacccccgaggagctggctgttaccgctgcagccgagcaggcagcacaa
cacgctgctgctgaggaggctaacgcccaggccatggccatacaggctgtcctgcaggcc
gcacagcacgctgtcatgaatgaaggagacagtggccaggagggccagcaccaaaccacc
accatccccattgtgttgactcaggctgagctggcagccctggtgcatcaacaacaacag
ctgcaggaagcccaggctctggcccaggcggcggcggcggcagcagcagcagcacagcac
aaccagcccaccgagggcctggccccagcagacagcctgaacgacccggagtcagagagt
aacggccaggagctggctgcagcagtgacccaggcggtggcccggctagccccaacctgc
accatggtggtgacaaacccgggtaagactcagcccatgatggtggccacccctgctaag
actcagcccatgatggtggccacccctgctaagactcagcccatgatggtggccacccct
gctaagactcagcccatgatggtggccacccctgctaagactcagcccatgatagtggcc
acccctgctaagactcagcccatgatggtggccacccctgctaagactcagcccatgatg
gtggccacccctgctaagactcagcccatgatggtggccacccctgctaagactcagccc
atgatggtggccacccctgctaagactcagcccatgatggtggccacccctgctaagact
cagcccatgatggtggccagcccggctaagactcagcccatgatggtggccagcccggct
aagatgcaggcagctgcgaccctggcagaggtggctaacggcatagagtctgctgcaggg
agacaaggagctcctcctgtggtggccaaagccccggtgaagaaagacaaccagtggttt
gatgttggcattgtcaaagtgaccaacaccgtggtcacacactactacttgcccactgac
gaccaagcctctgtcgatgatgactctggggcgatcccagactacagtcagatgaggaag
atggatctccagcctggaacggcctataaattcagagtggccgggatcaacacctgtggc
cgggggaacttctcagaggtctcggccttcaagacgtgtctaccaggcttccccggagct
ccctgtgctatcaagatcagcaagagcccagacggcgcccacctgacctgggagcctccg
tcggtcacatctggtaagatcattgagtactcggtgtacctggccatccagagcgcccag
agcggggagcaggccaagcccaccaccaccaccaccccagcccagctggctttcatgcga
gtgttctgtgggcccaacccttcctgcctggtgcagtcgtccagcctctccaacgcacac
atagactacaccaccaagcctgccatcatcttccgtatcgcagcccgcaacgagaaaggt
tacggtcctgccacgcaggtcaggtggctccaagagataggtaaagatggcgttgcagct
aaaccaactgctaagagaccaggctcctcacctgacatgaaagctgccggtcctaagaag
gccagatcagaccagtaa
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