Oncorhynchus masou masou (cherry salmon): 135503854
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Entry
135503854 CDS
T10723
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135503854 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135503854 (hdac6)
04131 Membrane trafficking [BR:
omm04131
]
135503854 (hdac6)
03036 Chromosome and associated proteins [BR:
omm03036
]
135503854 (hdac6)
Enzymes [BR:
omm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
135503854 (hdac6)
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135503854 (hdac6)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135503854 (hdac6)
Membrane trafficking [BR:
omm04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
135503854 (hdac6)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
135503854 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
135503854
NCBI-ProteinID:
XP_064778091
LinkDB
All DBs
Position
18:3815857..3859158
Genome browser
AA seq
1162 aa
AA seq
DB search
MESVPEPRSVRRSPRTSKSPDNNAAKKESGKTRKKTSNLQETRRRGRMDRSKGEEDIANQ
LNNLDLCNEASATGTGLVFDNMFTHHRCLWDPSHPECPERVSTVMDTVEKQGLLSRCVTV
EARAASNEELHLVHTKEYVDLMRSTQRMDEDQLKTLADSYDSVYIHPESYTCASLAVGSV
LQLVDKVMTSELRNGFSVARPPGHHAQVDQMNGYCMFNNLAIAARYAQTRHRVERVLIVD
WDVHHGQGIQYIFQEDPSVLYFSVHRYEEGLFWPHLPESDSSAVGTGSGEGYNINLPWNK
IGMKDADYVAAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDPKGEMSASPQCFSVLTHMLL
GLAQGKLLLVLEGGYNLQSTAEGVCACLRSLLGESCPRLGSPSIPSDSALKSISRSISAL
YPYWTSLQVLEGGPLSDSDPLNPALTPAESSEELGEELCEERGDSLDLTTGLVYDQRMME
HHNMWDSHHPELPQRIQRIFSRHDDLGLVSRCLRIPARLALEEELALCHSLEHIAKIKAT
EGMKTRDLHRLGDEYNSIFISTESYRSARLAAGACFNAVQAVLTGQVRNGVAIVRPPGHH
AEKDAACGFCFFNTAALTARYAQSISHQPLRVLILDWDVHHGNGTQHIFEEDDSVLYISL
HRYEDGTFFPTSEDAHYNRVGEGKGAGFNVNIPWNGAKMGDAEYLAAFHSVVMPIAREFD
PGLVLVSAGFDAARGDPLGGYQVTPPGYAHLTHLLMGLAGGRILVILEGGYNLTAISESM
SACTSILLGDPALPLPLLPPPHPNAAVSINNVIRTHSAYWRSLRIQLPESLRLSLPNPKP
RGKRTSKGKKSPRQGNQGRASPGQGSPQTTPQTTPQTTPQTTPQTTPQTTPQTTPQTTPQ
TTPQTTPQTTPQTTPQTTPQTTPLPSGDRGDLDLDDLTKGLVSLDLNQSTSANPSPASVP
VGGARSKVRLSPMKSPVVKEVKTEAVPNTPEILQPTPDETETPEVAMAASDPVTKGDQES
GAVEVEGASGYAEEPVFELFCGNQDVDGSTMYVVEPLSWCPHLDSVRPVPVGGIDVFRPC
EDCGTDTENWICLCCYKVYCGRYVNQHMLTHGVASEHRLVLSFADLSVWCYSCQAYVHNQ
MVFEAKNAAHCMKFGEDMPLSN
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgtgccagagcccaggtctgtcagacgttcccctcgcacgtcaaagtcaccg
gacaacaacgcagccaaaaaggagagcggcaagacccggaagaagacgagcaacctgcag
gagactcggaggagaggaagaatggatagaagtaaaggagaagaggacatagccaatcaa
cttaacaacctggatctatgtaatgaggcttcagccacagggactggtctggtgtttgac
aacatgttcacacaccatcgctgtctctgggatcccagccacccagaatgcccagagaga
gtgagcactgtaatggacacagtggagaagcagggactgctgtcccgctgtgttacagtg
gaggcgagggctgcgtctaacgaagagctgcacttagttcacacgaaggagtatgtagat
ctgatgaggtccactcagcgtatggacgaagaccagctgaagacgctggctgactcctat
gactcggtctacatccaccctgagtcatatacgtgtgcaagtctggctgtgggctctgtt
ctgcagctggttgataaggtcatgacctcagagctccggaatggattctctgttgctaga
cctccaggccaccacgcccaggtcgaccagatgaatggttactgtatgtttaataatctg
gccatcgcagcgcgctacgcacagacacgccatcgagtggaacgagttctgatagtggac
tgggatgtgcatcacggccagggaatccagtacattttccaggaggatcccagcgttctg
tacttctcagtccacagatatgaggagggtttgttctggccccatctgcccgagtcagac
agtagcgctgtgggcaccggttctggggagggatacaacatcaacctgccctggaataag
attggaatgaaagatgcagactacgttgctgcattccagcagcttcttttgcctgtagcc
tatgagttccagcctcagcttgtcctggtggcagcaggcttcgactctgtgataggggat
cccaagggagagatgtctgccagtcctcagtgtttctctgttctgactcacatgctgctg
ggcctggctcaggggaagttgctgctggttctcgagggaggatataaccttcagtccaca
gcagaaggggtgtgtgcctgtctgaggtcactattgggggagtcctgcccccgcttgggg
tcaccatccatccctagtgacagtgccctgaaatccatctccaggtctatctctgctctg
tacccttattggaccagtctgcaggtactggagggagggcctctatcagacagcgacccc
ctgaacccagccctgaccccagcagagagcagtgaggagttaggtgaagagctctgtgag
gagagaggagacagcctggacctaaccacgggcctggtgtacgaccagaggatgatggaa
catcacaacatgtgggacagccaccacccagagcttccccagaggatccagcgtatcttc
tcccgtcatgacgacctgggcttggtgtcccgttgcctgaggataccggctcgacttgcc
ttagaggaggagctggctctgtgccacagcttggagcacatagccaagatcaaggccaca
gaggggatgaagacgagggaccttcacagactgggagatgagtacaactctatcttcatc
agtactgagagctacaggagcgcccggttggccgctggggcctgctttaatgcagtacag
gctgttctgacgggacaggtccgtaatggcgtggccatcgtgcgcccccccggacaccat
gccgagaaggacgctgcctgtgggttctgtttcttcaacaccgccgccctgactgcccga
tacgcccagtccatctcccatcagcccctgcgggtcctcatcctggactgggatgttcac
catggcaacggaacacagcacatcttcgaagaggatgacagtgtcctctacatctccctg
catcgctacgaggatgggaccttcttccctacttccgaggacgcgcactacaacagagtg
ggcgaggggaagggagcagggttcaacgtcaacatcccctggaacggagccaagatgggc
gacgcggagtaccttgcagccttccactcagtggtcatgcccatcgctagagagtttgac
ccgggcctggttctggtatcggcagggtttgatgcagccagaggggaccctctcggaggg
taccaagtgacccccccgggctatgcccacctcacccacctcctgatgggcctggcaggc
ggcagaatattggtcatcctggagggtggttataacctgactgccatttcggagtctatg
tctgcctgcaccagcattctcctgggagaccccgctctgcccctgcctcttttgccccca
cctcaccccaacgcagcagtcagcatcaacaacgtcatacgcacccactccgcctattgg
cggtccctcaggatacaacttccagagtctctccgtctgtctctgccaaaccccaaaccc
agagggaagaggacttctaagggcaagaagtctcccagacagggtaaccagggcagggcc
agccctggtcaggggtcacctcagaccacacctcagaccacacctcagaccacacctcag
accacacctcagaccacacctcagaccacacctcagaccacacctcagaccacacctcag
accacacctcagaccacacctcagaccacacctcagaccacacctcagaccacacctcag
accacacctctgccctctggtgatcggggcgaccttgacctagatgacctcacaaaggga
ctggtgtcactcgacctaaaccaaagtacctcagccaatcccagcccagcgtctgtccct
gtgggtggagccaggtcgaaggtgaggctcagtcctatgaagagccctgttgttaaggag
gttaagacggaggctgttccaaatacgcccgagattctccaaccaacacctgacgagaca
gagacgccggaggtcgccatggctgcctcagacccagttaccaagggagaccaggagagc
ggtgcggtggaggtggaaggggcgtctggttacgccgaggagccagtgtttgagctgttc
tgtggaaaccaggatgtggacgggagcaccatgtacgtggtggagcccctgtcctggtgc
ccccacctagactcagtgagacctgttcctgttggaggtatagatgtgtttcggccctgt
gaggactgtggaaccgacactgagaactggatctgtctctgctgctacaaggtgtactgt
ggtcgctatgtcaaccagcacatgttaacccacggcgtggcgtcagaacaccggctggtg
ctgagcttcgctgacctgtcggtctggtgttactcctgtcaggcctacgtccacaaccag
atggtgtttgaagccaagaatgctgcccactgtatgaagtttggagaggacatgcccctc
tctaactga
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