Oncorhynchus masou masou (cherry salmon): 135503892
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Entry
135503892 CDS
T10723
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
135503892
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
135503892
NCBI-ProteinID:
XP_064778143
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Position
18:8104484..8137839
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AA seq
818 aa
AA seq
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MGILTHCVLLILFQHLTSAYDFKVGLDNGQYAFVKDPSLNIEKRSADVELFPFDSESAEH
IRSRRSADQGDCNRLQGFDTKLTNNTHTYSFNDLSGSVSLAWVGDATGVILALTTFQVPF
FMLRFAQSKLYRSENYGKSFQDVTNLINNTFIRTEFGIAIGPENSGKVILTGDVSGSLGS
RIFISRDFGNSFEQQDLPFNPLMQITYNPRDANVLLVISNTKELWLSENFGENWRKIHDM
VCLFKWGMNSNIFFTTSLNGSCNDMGMLDLRRTTDYGKTIKTVATKIFSFGLGGKFLFAS
VMTGTGTLRMIHVSTNQGEEWNMAQLPPVGHEEFYSILAANEDMVFMHVDEPGDTGYGSI
YVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSILAEGGSVQSVVSFDQGGE
WVPLQKPANTKCDSTANDPDKCSLHIHAAYSTAMKLNVPMLPLSEPNAVGLIMAHGSVGD
AISVMKPDVFVSDDGGYTWLQALEGPHHYAILDSGGLLVAVEHSAQLIKDITFSTDEGQC
WHVHQFTSDPIHFTGLAVEPGARSMNVSVWGYRDSLLSQYWVSVTVDFRELLTRTCEAQD
YVQWLAHSDDISDPNDGCMLGYKEKLLRLRKASVCWNGRDYEVNKQPTPCLCTLDDFLCD
FGYYRKENSSECVEQPDLKGHLLEFCLQGKEELLQTRGYRKIPGDKCEGGKQPERKEIDL
SKRCVSDLLGPQERQMDGHLSSSAPIVVTVLIIVLLAIIAGVLIVKKYVCGGRFLVHSYS
VLQQHAEAQGLDEPLDSNCTQTRNMANFHDDSDEDLLE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggaattctaacgcactgtgttttacttattttattccagcatttgacgtccgcttat
gattttaaagtaggactagacaacggacagtatgcatttgtgaaagatcctagtttgaat
atcgaaaagagatctgcagatgtagaattattcccgtttgactctgaatcagccgaacac
attcggagcaggagaagcgctgatcaaggggactgtaaccgtctccagggattcgacacc
aagttgactaacaacacccacacctattccttcaatgacctgagtgggtccgtgtcactg
gcctgggttggagacgccaccggggtcatcctggctttgacaacattccaggttccattc
ttcatgttgagattcgcccagtccaaactctatcgaagtgagaactatgggaagtcgttc
caggacgtcacaaacctcatcaacaacactttcatcaggacagagttcgggatcgccatc
ggaccagagaactctgggaaggtgatcctgacaggtgatgtgtctggcagcctgggatct
cgtatctttatctccagagactttgggaacagctttgagcagcaggaccttcccttcaac
cccctgatgcagatcacatacaaccccagagatgccaacgttctcctggttatcagcaac
actaaagagctctggctgtcagagaactttggagagaactggaggaagatccatgacatg
gtgtgtctgttcaaatgggggatgaacagtaacatattcttcaccaccagcctcaatgga
tcctgcaatgacatggggatgctggacttgaggaggacaacggactacgggaagaccatc
aagactgttgccactaagatcttctctttcggcctggggggaaagtttctgtttgcctct
gttatgactggaactggcactctgaggatgatccatgtgtcgactaaccagggggaggag
tggaacatggctcagctgcctccggttggccacgaggagttctattccatcctggcagcc
aatgaggacatggtgttcatgcacgtggacgaaccaggagacacaggctatggcagcatc
tacgtgtcagacgacaggggtacggtgtactctaagtctctggagcgtcacctctacacc
accacagggggagacactgacttcaccaacgttacctctctacgaggggtcttcatcacc
agtatactggcagagggtggctcggtgcagtccgtggtgtccttcgaccagggaggggaa
tgggtgcccctgcagaaacctgccaacaccaagtgtgactccacagccaacgaccccgac
aaatgcagtctccacatccacgcagcttacagcacggctatgaagctgaacgtccccatg
ctgcctctcagcgaaccaaacgctgtaggactcatcatggcgcacgggagtgtgggcgat
gccatctctgtgatgaagcctgacgtattcgtgtcagatgatggaggttacacctggcta
caggccctggagggacctcaccactatgccatcctggactcgggtggactcctggtggcc
gtggagcactctgctcagctcatcaaagacatcacgttttccacagacgaaggccagtgc
tggcacgttcaccagttcaccagcgatcccatccacttcacagggctggcggtggagccg
ggggcgaggtctatgaacgtcagtgtctggggctacagagactctctgctcagtcagtac
tgggtatctgtcaccgttgacttccgagagctgctcactagaacctgcgaggcccaggac
tacgtgcagtggctggcacactctgatgacatcagcgaccctaacgatggctgtatgctg
ggttacaaggagaagttactgcgtctaaggaaggcctcggtctgctggaacggacgggac
tatgaggtcaacaagcaacccaccccctgcctctgcaccctggatgactttctgtgtgac
tttgggtactatcgtaaagagaacagctctgagtgtgtggagcagccggacctgaagggc
caccttctggagttctgtctgcaaggcaaggaggagctgctgcagaccagaggctatagg
aagatccccggggataagtgtgagggaggaaaacagccagagagaaaagagatcgacctc
agtaagaggtgtgtcagtgatctgctgggacctcaggaacgacagatggacggccatctg
tccagctctgcacccatcgtagtgactgttttaatcattgtgctgctcgcaatcatagct
ggggtcctcattgtcaagaagtatgtctgtggtggcaggttcctggtacacagctactct
gtcctacagcagcatgctgaggcccagggactagacgaacccctagacagcaactgcact
cagaccagaaacatggccaacttccacgacgattcagacgaggatcttctggagtaa
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