Oncorhynchus masou masou (cherry salmon): 135504039
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Entry
135504039 CDS
T10723
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135504039
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omm03310
]
135504039
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135504039
Nuclear receptors [BR:
omm03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
135504039
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
135504039
NCBI-ProteinID:
XP_064778365
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Position
18:15133507..15285146
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AA seq
510 aa
AA seq
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MATNRERQVGHMTGFPPAVYPFAFNSMRNHSPFDLLANSRLFGRFSTDLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEELVLPESYELSG
ELEELVNKVSKAHQDTFPSLLQLGKYHTNSSAEQRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAISLISGDRMDLEEPQKVDKLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
QTESSGESSPPPAPPPIPPASSKPPTTMKTEAEDEEDSWGTEPSPEEEDEDDYDDGEEED
RDRGSDSEGESWALEGSSEGARKNHAGRAQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacagggagcggcaggtgggtcacatgacagggtttccaccagctgtctac
ccatttgccttcaactccatgcggaaccactcccccttcgacctgctggccaatagcaga
ctgtttgggaggttcagcacagacctccctaaagaaatggccgcactctcggtggagacc
cagagcaccagctctgaggagatggtccccagctctccctctccacctcccccaccacgc
atctacaaaccctgcttcgtgtgccaggacaagtcctctggataccattacggagtcagc
tcatgtgagggctgcaagggttttttccgacgcagtatccagaagaacatggtgtacacc
tgccaccgagacaagaactgccagatcaacaaggtcaccaggaaccgctgccagtactgc
cgactgcagaagtgctttgaggtcggcatgtccaaggaagcggtgcgtaatgacaggaac
aagaagaagaaagacgtgaaggaggagttggtgttgccagagagttatgagttgagtgga
gaactggaggagctggtcaacaaagtcagcaaagcccaccaagacaccttcccctcactg
ctgcagctgggcaaataccacaccaactccagtgcagagcagcgcgtgcagctggacctg
gggctgtgggataagttcagtgagctttccaccaagtgcatcatcaagatcgtggagttt
gccaagcgcctccctggcttcaccaccctcaccatcgctgaccagatcaccctcctcaaa
tcagcctgcctggatatcctgatgttgaggatctgcacccgctacactccagagcaggac
accatgaccttctccgacgggctgaccctgaaccggacccagatgcacaacgcaggcttc
ggcccgctcacagacctggtgtttgcctttgctggccagctgctgcctctggagatggac
gacacagagacgggcctcctcagcgccatctccctcatctctggagaccgtatggacctg
gaagagccccagaaggtggacaagttgcaggagcccctcctggaggccctgaagatctac
gcacgtcgcagacgccccaacaaaccccacatgttcccccgcatgctgatgaagatcact
gacctcagaggcatcagcaccaagggggcagagagagccatcactctgaagatggagatc
ccaggccccatgcctcctctgatccgggagatgttagagaacccagaagcatttgaggac
caaacagagagcagtggagagagctccccacctcctgcccctccacccattccaccagcc
tcctccaagccccccaccaccatgaagactgaggctgaggacgaggaggacagctggggg
acagagccttccccagaggaggaagatgaggatgactatgatgatggggaggaggaggat
cgggacaggggctcggacagcgagggggaatcctgggctctggagggtagcagcgaaggg
gctaggaagaaccatgccgggagggcgcagtga
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