Oncorhynchus masou masou (cherry salmon): 135504255
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Entry
135504255 CDS
T10723
Name
(RefSeq) neurofascin-like isoform X1
KO
K06757
neurofascin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135504255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135504255
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
L1 family
135504255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
Ig_6
Ig_4
V-set_CD47
DUF3792
Motif
Other DBs
NCBI-GeneID:
135504255
NCBI-ProteinID:
XP_064778711
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All DBs
Position
18:complement(23502769..23530749)
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AA seq
1187 aa
AA seq
DB search
MGMLARSTILLLLWQGLSAIDVPLEIRQPPTIIKQSLKDHVVDPRDNMVIECEAKGTPHP
IFSWRRNGKYFNVARDTQASMRRRSGTLDIYAWADPEAYEGEYQCVATNEYGTAYSNKIN
LRISRAPLWPREVLEPVTVSVGLPLVLDCSPPPGPPKPETYWMSKCSSGRPFNWPHQPHP
PVMLPIKQDRRVSMGVNGDLYFSNVYVNDSATDYCCNARFPYKNIIQQKMPITVRVLTTR
MVSEAAPTFLSPAGRSSSQTVLQGEELLLECIAAGVPTPVITWTKDGEELDTTNMKVKNY
NKLLQIPKAAFEDSGEYTCSATNKIGYLEHTITVRIKAAPFWLEKPSNLVLAPEENARLV
CRSDGIPRPNIRWFINGDTMEDATPVPNREVSGDTITFRSVTVANTGVYQCNASNQYGYL
FANAYINVLHATPRILRPRTDLVKVIEGRRAWLDCRYFGSPVPDLRWSKYGLGNLEGNRF
KVHSNGTLQIKGTRKDDQGTYLCIVSNVAGRDENQVKLEVKESTKILKRPDNMRVLRGAD
VRLECKAQHDPTVAVTTTWLKNKQFLIIGWRLSLDESTLVITNVNRGDEGNYTCIIKTEM
DKNTASARLVVMDRPDPPTNLQLSDPFERSVRLTWTPGDSNHSPIKENLVQYDDDDWLPF
KWRNLSTYPGNLNSVILQLSPFIIYEFRVIAINDIGMSKPSRSSANFQTGGAPPDAIPKN
IQGVGTWRNNMMISWEALNNREWNGPHLKYLVWWKRKDSREEWKNATTWWCKYYIYDTDT
FTPYEIKVQAVNDFGMGPESPVIIGYSGEDRPTAAPLNLRVSRIEATKVTVHWDPVANIS
IMGELKEYKVYFWRDSSQLRWLSVSRAMKSKALPASGLPFSGVLPGLIPYSNYKMYIVVA
NNRYEGHPSNTIEFSTTEGTPSAPRSFRIQQRHLDMIWVDWDTPAEPNGIVTGYILKYQT
VNATQGEELHVERFPPNTTSFAVRRYDRYTRYRFTIAAQTRIGVGEWYTEESPHYTTEAY
AREQVDLSTQGWVIGVMCAVALFVLILLVVCFIKRSRGGKYPVRDKKEVTLEPVDDKDQD
GSFDYRSLERISRVTTIPYSARREEETKVGRGQTTVDTMMKRTDSDDSLVDYGDGQEIEF
NEDGSFIGQYTGHKERDDRDTEFSESRSQEAHSPMANSPMSPIYSFA
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggggatgctggccagatccacaatattactactgttatggcaaggactgtctgccatt
gacgtcccactggaaatcagacagccccccaccattataaaacagtcgttgaaggatcat
gtcgtggaccccagagacaacatggtcattgagtgtgaagccaaaggcaccccccaccca
attttctcatggaggcgtaatgggaagtatttcaatgtggcacgggacactcaggcctcg
atgaggagacgttcggggacgctggacatctatgcctgggctgacccggaggcttatgag
ggggagtaccagtgtgttgccaccaatgagtatggcactgcatactcaaacaagatcaac
cttcgcatctctagggcccctctgtggcccagagaggttttggaaccggtaacggtgagt
gttggtcttcctctggtcctggactgcagccctcctccaggccctcccaaacctgagacc
tattggatgagcaagtgttcatcagggagacctttcaactggcctcaccagccccacccc
ccagtcatgttgcctatcaaacaagaccgtagagtgtctatgggggtgaatggagatctc
tacttctctaatgtctacgtcaatgactctgccaccgactactgttgcaacgcgcgcttc
ccctacaaaaacatcattcaacagaagatgcctattaccgttagagtccttacaacccgc
atggtgtcagaggccgctcccaccttcctgtctccagccgggaggtccagctcccagact
gtcctgcagggggaggagctgcttctcgagtgcatcgctgctggagttccaacccctgtc
atcacatggaccaaagatggagaggaactggacacgaccaacatgaaggtgaagaactac
aacaagttactgcagatccccaaggccgcttttgaggactctggtgaatacacgtgcagt
gccacaaacaagattggatacttggaacacaccatcactgtccggatcaaagctgctccg
ttctggttggaaaagcccagtaacctggtgctggccccagaggagaatgcacgcttagtg
tgccgctctgacggcatcccccggcccaatatccgttggttcatcaacggagatacaatg
gaggatgctactccagtcccaaacagggaggtgtccggagacacaattaccttccgttct
gtgactgtggcgaacactggtgtttaccagtgcaatgcctctaaccagtatggctacctg
tttgccaatgcttacatcaacgtactgcatgcaacaccacgtatccttaggcctaggact
gacctggtgaaggtcattgagggcagacgcgcctggctagactgccgctattttggctcg
cccgtgcctgatctgcgctggtctaagtatggacttggcaacctggaggggaatcgcttt
aaagtacacagcaacgggacactacagatcaaaggcacccgtaaggatgaccaggggaca
tatctgtgtattgtcagcaacgtagcaggacgagatgaaaaccaagtcaaactagaagtc
aaagagtccaccaaaattctcaaacgcccagataatatgagagtcctccggggggctgat
gtccggttggagtgtaaggcccaacatgaccccacggtcgccgtcaccaccacctggctg
aagaacaaacagttcctcatcataggctggaggctgtcgctggatgaatcaactctggtc
attacaaacgtcaatagaggagacgagggcaattacacctgcatcatcaagactgagatg
gacaagaacactgcctccgcccgcctggtggtgatggatcgtccagacccccctacaaac
ttgcagttgtcggacccctttgagcgcagcgtcaggcttacctggacccctggagatagc
aatcacagtcctatcaaagaaaacctggtgcagtatgatgatgacgactggttacctttc
aagtggagaaacctttccacgtaccctggaaacctgaactctgtcattctgcaactgtca
ccattcattatctatgagtttagggtcattgctatcaatgacattggtatgagtaaaccc
agtcgctcgtcagccaacttccagactggtggagcacctccagacgccatccctaaaaac
atccagggagtgggaacatggagaaacaacatgatgatcagctgggaggcattaaacaac
agagagtggaacggtccccacctgaaatacttggtgtggtggaaacggaaggattccagg
gaggagtggaagaacgctaccacttggtggtgtaaatactacatctacgacacagacacc
ttcacaccatacgagataaaggtccaggctgtcaatgactttgggatgggcccagagtcc
cctgtcatcataggctactcaggagaagaccgtcccactgctgcccccctcaacctgcgt
gtgtccaggatagaggccactaaggtcaccgtgcactgggaccccgtagctaacatcagc
atcatgggagaattgaaggaatacaaggtctacttctggcgagacagtagccagctgagg
tggctgagtgtgagcagggccatgaagtctaaagccttaccagccagcgggctgccattc
tctggtgtcctgccgggactcatcccttacagcaactacaagatgtacatagtggtggcc
aacaaccgatacgagggacatcccagtaacaccatagagttctccactacagagggaaca
ccctctgctccaagatccttcagaatccagcagagacatttggacatgatctgggtggac
tgggacactcctgcagagcccaatggcatcgtcaccggatacatactcaaatatcagaca
gtgaacgcaactcagggggaagaattgcacgttgagagatttcccccaaacaccaccagt
tttgctgttcgcagatatgatcgctacacccgctatagattcaccatagcagcacagact
agaatcggggtaggagagtggtacacagaggaatcaccccattatacaactgaagcttat
gctcgggagcaggtggacctctccactcagggctgggtaattggtgtgatgtgtgctgtg
gctctcttcgtgctcatcctgctggtcgtctgctttatcaaaaggagccgagggggcaaa
tacccagtacgggacaagaaagaagtgacattggagccagtggatgacaaagatcaggat
ggatcatttgactatcggtctctggaaaggataagtcgtgtcaccaccattccctactct
gcccgacgggaggaagagactaaagttggcaggggccagacgacagtagacaccatgatg
aaacggacagatagtgacgacagtctggtggactatggtgatggacaggagattgagttc
aacgaggacggctccttcattggccagtacactggacacaaggagagggatgacagagac
acagagttcagtgagagcaggagccaggaagcccattccccgatggccaactcccccatg
agccccatctattcatttgcataa
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