Oncorhynchus masou masou (cherry salmon): 135504452
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Entry
135504452 CDS
T10723
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
omm
Oncorhynchus masou masou (cherry salmon)
Pathway
omm00310
Lysine degradation
omm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
135504452 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135504452 (prdm2a)
03036 Chromosome and associated proteins [BR:
omm03036
]
135504452 (prdm2a)
Enzymes [BR:
omm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
135504452 (prdm2a)
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
135504452 (prdm2a)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
135504452 (prdm2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-C2HE
ZNF428
zf-C2H2_2
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
135504452
NCBI-ProteinID:
XP_064779140
LinkDB
All DBs
Position
18:34023268..34042604
Genome browser
AA seq
1478 aa
AA seq
DB search
MEDSHTLYISELGDDDHLEEEMEDKELEETHCSLYLMSMETDELADSNTICQKPEAKGCD
LKQDLGSVSHSATPELPEDPDHDPDVELQDSFPCQFCERNFTSKQGLERHIHIHTLANHH
THIFKCKYCSKSFGSKIGRRRHERRHENAKARPGSLIKPVEPPTSALQRNGPECVSSPSS
SSASVLADREPASTSDEHGELQGGHTCKYCKKVFSTHTNMRRHQRRIHERHLRLIGKEAP
LLQEAKYPKLPPIKSQQDTNNTSPVAVLEIESDQEEQYMLDISGNISENLSFYIDGKIVS
TSTVSGCEVVEVNSGSATLVGLNAVIINPAQISQALKVETATHTGKGIPGQPLTKRRTAT
PPLLPQIKTELESEVLSSSSSSIVSSLIESLIPQNTESTILQRERTVYLSPKLKQLLQMQ
DGFKPSFALITEGQKLCSPLSLTVLPAGLGRFKRRTGSPPNSPQQSPMSNVESTATDVGV
SIAVNAPTSESQCSSPACSLSSNDESEISNSPQVNDTMTTRVLPEGWSPMSGGCSCNQQP
LDLSNAVKKSEDEALREAVLDLSVHRKSADSEAKRILVPQPLNKKRKPNTSMLEKVLMNE
YANLEVAAEQKLSILENHDAPLVTDLAIVTASDMSPATEGEVFGLTFPSAALSPSPSSLA
SVTRQSISPCTIALASPSPHPILPTAPSLITVLAPPTSSSSNSTNQPILQVLASKISPNP
LIICTEDSLNSAECEWRAALPDWATSNSASQLAISKPLDPTLNLQGHVFLTDHTLNQIAL
NTTTIESNIGFEVPTCSPALTLNDSLINSFDITNNTVVIECTVALETPEILVPTTIDFQE
NNFESTAPAQIVINQQQPLSLPHETVDPTILVSSLEQSVTLSTLSAVISECPTRQESISS
PVPAIIKTESNQKVVSEDISICPSKTPPPSEGTSQVEESSNETLSKLQETFTKEFICNVC
DKLFHSMKELGHHVSEHSDEWPYKCEFCVLLFGKPTALLDHRSTLHGVGKSYVCCACTKE
FAYLCNLKHHQKELHPGQECKYTEEENGKLRPQNYNNATKGGTEALSYCAMAESNKPVIK
DEGELDDATEELFTTIKIMASEGGKPKGLDVCLGINQHYPSFKPPPFPYHNRTPVGSVAS
ATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPNKNPIPLRHF
AKAQNGVLSSTNSTNGQNALHTASQTNRPKLNQEPPAKLKLNALNKRKKQLVQRAISQRS
KSTSLTKKTSSLVDEEQEIYVCPHCMREFTYRRSRTKHMAVCPRKPAAKEAKKRKDGSIS
YTKENNGHLRREVLHLEEKSDHEQKSRAHSSSPTKRTAILPAHKVLSNKKSKAIIAMASV
QTPQQAPKLTALSLVRPFNSPQRQGSRMQHGVKEIRSNITMVKSHQQPPQVDEHPCSQSG
RVRGPVTRSLQQIVVTDSAKEEQLTSQEPPGDLQDPSI
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggaagactctcacactttatacatctcagagttgggagacgatgaccatttagaggag
gagatggaggataaggaacttgaggaaactcactgcagtctttatttaatgtccatggaa
acggatgagctggcagattcaaacacaatttgccaaaaacctgaggccaaaggctgtgac
ctgaagcaggatttaggatcggtctcccattcagcaacccctgagctcccagaggatcct
gaccatgaccctgatgtagagctccaggactcatttccctgccaattctgtgaaagaaat
tttaccagcaagcaaggcttagaacgtcacatacacatccacaccttagctaaccaccac
acacacatatttaagtgtaagtactgcagcaagtcctttggctcaaaaattggccggcga
cggcatgagaggagacatgaaaatgcaaaggcaaggcctggatctttaataaagcctgtg
gagcctccaacttctgccctacagcgcaacggtccagaatgtgtgtcttctcccagtagc
tccagtgcctctgttttggcagacagagaaccggcgtctacgtcagatgaacatggagaa
ttacagggtggtcacacttgcaagtattgcaaaaaggtttttagcacgcatacaaacatg
cgacgacatcagcgcaggatccacgagcgccatctccggctcataggtaaggaagcccca
ctgttgcaggaagcaaaatatccaaagctaccccctattaaatctcaacaggataccaac
aacacaagcccagtagcagttcttgagatcgaaagtgaccaagaggagcaatatatgctg
gatatctctggtaacatctctgagaacctcagcttttatatagatgggaagattgtatca
acaagcactgtcagcggctgtgaggtagttgaagtgaactctggatctgctactttagtc
ggactaaatgctgtgattattaatcctgcccagatcagtcaggctcttaaagtagagact
gctactcacacaggaaaagggatacctggtcaacccttgacaaaaaggagaactgccaca
ccacctcttctaccccaaatcaaaacggaactagaatcggaagttttgtcctcttcttca
tcatcaattgtgtcatctttgatcgaaagtctcattcctcagaacacagagtctactatc
cttcagagagagagaacagtttatctgtcacctaagctgaaacagctcttacagatgcaa
gatggtttcaaacccagctttgccctgatcacagaaggccagaagctgtgttcaccactt
tccctgactgtcctcccagcaggattggggaggtttaaaagaaggaccgggtctccccca
aactcaccacaacaaagccctatgtcgaatgttgaaagcacagcaaccgatgtgggtgtt
tctattgctgtcaatgccccaacgtcagagagccaatgcagttcacccgcatgcagttta
tccagcaatgatgagagtgagatctccaacagtccacaagtaaacgatacaatgacaact
cgtgtcttgccagagggatggtccccaatgagtgggggttgttcctgcaaccagcaacct
ttggacctctcaaatgctgtcaagaaaagtgaagacgaagcgctgcgggaagctgtgttg
gacttgagtgtgcacagaaagagtgcagattcggaagcaaagagaattttagttccacag
cccttaaataaaaagaggaagccaaacaccagcatgttggagaaggttctgatgaatgag
tacgcaaacctagaggttgctgcagagcaaaaattaagtatattagaaaatcatgatgca
ccgttagttacagacttagccatagttactgcttcggatatgtcacctgctactgaaggc
gaggtgttcggattaacttttccctctgcagcacttagtccatccccttcctctctagct
tcagtcaccaggcaatcgatctcaccatgcaccatagcacttgcttccccatctccacat
ccaatcttacccactgctccgtcgctaattactgttttagcaccaccaacatcttcctct
agcaattccacaaatcaacctatccttcaagtattggcctctaaaatatctcctaatcct
ttaataatctgcacagaagattcattgaattcagctgagtgtgagtggagagctgctttg
ccagattgggctacctctaattctgcaagccaacttgccatctctaaaccccttgaccca
actctcaatctacaagggcatgtgtttctcacagatcacactttaaatcaaatagctctg
aacactaccacaattgaatccaacattggatttgaagtgccaacatgctctccagcttta
actctaaacgattcccttatcaactcctttgacattactaataatactgttgtaattgaa
tgcacagttgctcttgagaccccagagatccttgtccctaccacaattgatttccaagag
aataattttgaatccacagcacctgcgcaaattgtcataaatcagcagcagcctctgtcc
ttgcctcatgaaaccgttgaccctactattttagtatcttctttagagcaatcggttacc
ctttcaacgctgtctgcagtcatatctgaatgtccaactcgtcaagaatccatttcctcc
cctgttcctgccattattaaaacggaatcaaaccaaaaggtagtatcagaggacatatct
atctgcccctctaaaacgccacctccctctgagggcacaagtcaagtggaagaatcctca
aatgagaccctctccaagctacaagagactttcacgaaggaattcatatgcaatgtatgt
gataagctttttcattcaatgaaggaactgggtcatcatgtaagtgagcattctgatgaa
tggccatacaaatgtgagttctgtgtgctactctttggaaagcccacggcattgcttgat
cacaggtcaaccctccatggcgtcggcaagagctatgtttgctgcgcatgtacaaaggaa
tttgcttatctttgcaacctgaaacatcatcaaaaggagttgcaccctggccaggaatgc
aaatacacagaggaagaaaatggcaagctacgaccccagaactataacaatgcaacaaaa
ggtggcacagaggctttgtcctactgtgccatggcggagtccaataaacctgtcataaaa
gatgagggagaattagatgacgctactgaggaactctttaccacaataaagataatggct
tctgagggaggtaaacccaaaggcctggatgtttgccttggcatcaaccaacactatccc
agttttaagccgcctccgtttccctatcacaaccggacacctgttggctctgtagcctca
gctaccaacttcaccacccacaacatcccacaaaccttcagcactgctatccgatgcact
aaatgtggcaaaagctttgataacatgccagagctgcacaaacacattcttgcctgtgca
aatgccagtgacaaaagacgctacacacccaataagaaccccattcctcttcgtcacttt
gcaaaagcccaaaatggagtactgtcctctactaattccacaaatggccaaaatgctcta
cacacggcaagtcaaacaaatcgtcccaaactcaatcaggagccacctgccaagttgaag
cttaatgcactcaacaaaaggaaaaaacagctggtacagagggccatttcacagaggagt
aagtctacctctttgacaaagaaaacgtcttctctagtcgatgaggagcaagagatctat
gtctgtccacattgcatgagagaattcacataccgccgcagccggaccaagcacatggcc
gtctgccccaggaaacctgctgccaaagaggccaagaaaaggaaagatggcagtatctct
tacactaaggaaaataacggccaccttcgcagagaagtccttcatttggaagagaaatct
gaccatgaacagaaaagcagagcccatagttcaagtccaacaaagaggacagccatatta
ccagctcataaagtcctgtcaaacaaaaaaagtaaagccatcattgcaatggcaagtgtc
caaacaccgcagcaggcacccaaactgactgcactatctcttgttcgccctttcaactcc
ccacaacgtcaaggcagtaggatgcagcatggtgtgaaggaaattcgttctaacattaca
atggtgaaatcccaccaacaaccaccacaggtggatgagcacccctgcagtcagagtgga
agggtgaggggaccagtgacccgcagtctacagcagattgtcgtcacagattcagcaaag
gaagaacagctgaccagtcaggagccaccaggggatctgcaggatccttcaatttga
DBGET
integrated database retrieval system
