Oncorhynchus masou masou (cherry salmon): 135504586
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Entry
135504586 CDS
T10723
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
omm04218
Cellular senescence
omm04260
Cardiac muscle contraction
omm04261
Adrenergic signaling in cardiomyocytes
omm04270
Vascular smooth muscle contraction
omm04530
Tight junction
omm04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135504586
04020 Calcium signaling pathway
135504586
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
135504586
09144 Cellular community - eukaryotes
04530 Tight junction
135504586
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
135504586
09153 Circulatory system
04260 Cardiac muscle contraction
135504586
04261 Adrenergic signaling in cardiomyocytes
135504586
04270 Vascular smooth muscle contraction
135504586
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135504586
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135504586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
Motif
Other DBs
NCBI-GeneID:
135504586
NCBI-ProteinID:
XP_064779373
LinkDB
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Position
18:complement(40518760..40569968)
Genome browser
AA seq
1849 aa
AA seq
DB search
MVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYLVGTGILAEEEPVPCAVSGHGRQCR
MNGTVCREGWHGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDAMGSELPWVYFV
SLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAED
IDPENEEEGDEEGGKRNPSVPASETESVNTDNPNGEDDKANCCGPHCQKITKSKYSRRWR
HWNRFCRRKCRAAVKSVSFYWLVIILVFLNTLTISSEHYNQPDWLTEVQDVANKVLLALF
TCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGIVETILVELAVMSPLGISVFRCVRLLRI
FKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETITKRS
TFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPFSSGMVVSIYFIILFVCGNYILLNV
FLAIAVDNLADAESLNTAQKEEEEEKERKKSSRSDTDKTEDLKPEGQDGEIKLPLEEEVE
EEKEPYPTPDTPVGDDDDDDDELPEVPIGPRPQRLSDLSVKEKTPPIPEGSAFFIFSNTN
LVRVACHKLTNHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIILGYFDYAFTAIFTVE
ILLKMTAFGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLR
AINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSSPE
ECKGTYILYKDGDTVLPAVRERIWYNSDFNFDNVLMAMMALFTVSTFEGWPALLYKAIDS
NRENMGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQR
QCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYVMFVLIILNTLCLAIQHYGQSHLF
NYAMDVLNMVFTGVFTVEMILKLIAFRPRGYFGDAWNVFDALVVIGSVVDIILSQNTEDS
ARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQ
VFGKIAMVDGTQINHNNNFQTFPQAVLMLFRCATGEVWQEIMLACLPGKLCDSESDYNPG
EERTCGSGFAIIYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWS
EYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATL
FALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATF
LIQDYFRKFKKRKEQGLVGRNSFTSLNSTIALQAGLRTLHDIGPEIRRVISCDLQDEGLV
DINAEDGEEIYRRNGVIFSNHTNHVNGDHRGSAHQTNVTQRPLQVPPPSCHASVEPSQVG
SEERAGEPHWYNYYYPKSPISSNANLNNANVHPVPSLTNGGQRHCLRREHSSANGAPSSS
SHRKIVDFDTHTTVQSARSDSGGVRYPTVRREEPGRADSDEDRGSGEYFSGEEYQEDDIM
LHKDRMSRKECQDHQPDSLCDDHQQPIYQDGGRSPKRWFLPSTPHALHRPSFNFHCLRKQ
SSQGDDTPLTPSVPLRTALPLHLLQQQVMAVAGLDSSRVPRHSPSRSLRSWATPPVSPSS
RDHSHYYTPLIQVDWRGLSSVSSTPGSVRRSTWYTDAPEAPLSRTYSPLQLQIPPEYRRQ
YHQNRGSANSLVEAVLISEGLGKYAKDPKFVSATKHEIADACEMTIDEMESAASNLLNGS
MGNGAGATDTVTGTSLMDRNLEDYSDEEPDMCGKYEEDLTDELICISTL
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggttcctctgctccacatcgctctgctcgtcctcttcgtcatcatcatctacgccatc
atcggcctcgaactcttcatcggcaagatgcacgccacctgctacctggtgggcaccggt
attctggcagaggaggagcctgttccgtgtgcggtgtcaggccatgggcgccagtgcagg
atgaatgggactgtgtgtagggaaggatggcacgggcccaatggtggcatcaccaacttt
gacaacttcctgtttgccatgctcactgttttccagtgtatcaccatggagggctggact
gatgttctgtactggatgaatgatgccatgggttctgagctaccctgggtctacttcgtc
agtctggtcatcttcggttccttctttgttctcaacctggttctgggagtgttaagcgga
gagttctccaaggagagagagaaggccaaggctcgtggagacttccagaagctgagagaa
aagcagcagctggaggaggatctgaagggctacctggactggatcactcaggccgaggat
atcgaccctgagaatgaggaggagggggacgaggaggggggcaaacgcaatccaagcgtg
cctgccagcgagacagagtctgtgaacactgacaaccccaatggagaggacgataaggct
aactgctgcggaccacactgtcaaaaaattactaaatcaaagtacagtcggcgatggcgt
cactggaaccggttctgccgcaggaagtgtcgtgctgccgtgaagtcggtgtctttctat
tggctggtgattatcctggtgtttctgaacacgctcaccatctcgtcagagcactacaac
cagcctgactggctcacggaagtacaggatgtggccaacaaggttctgctggctttgttc
acgtgtgagatgctggtgaagatgtacagtctgggcctgcaggcctacttcgtgtccctc
ttcaaccgcttcgactgcttcgtggtgtgtggcggcatcgtggagaccatcctggtggag
ctggccgtcatgtctcctctgggcatctctgtgttccgttgtgtccgcctgctacgcatc
ttcaaggtcacacgccactgggcatctctcagtaacctggtggcgtcgctgctcaactcc
atgaagtccatcgcttccctgctgcttctgctcttcctcttcatcatcatcttctccctg
ttgggcatgcagctctttggaggcaagttcaacttcgacgagacgataaccaagaggagc
accttcgacaacttcccccaggcactactcacagtgtttcagatcctgacaggcgaggat
tggaatgctgtgatgtatgatggcatcatggcgtatggtggacccttctcatcgggcatg
gtcgtcagcatctacttcatcatactctttgtctgtggaaactacatcctgctgaacgtc
ttcttggccatcgccgttgacaacctggcagacgcagagagcctgaacacagcccagaag
gaggaagaggaggagaaggagaggaagaagagttccagaagtgacacagacaagacagag
gatctgaaacctgaaggccaggatggggagatcaagcttccattggaggaggaagtggaa
gaggagaaggagccgtatcccactccagatactccagttggtgacgatgacgacgacgac
gacgagctcccggaggttccgattgggccacgtcctcagaggctgtcggacctcagcgtc
aaggagaagactccgcccatccctgagggcagcgctttcttcatcttcagcaacactaac
ctggtccgggtggcctgccacaagctgaccaaccaccacatcttcaccaacctcatactg
gtcttcatcatgctgagctctgtgtctctggctgctgaggaccccatacgcaacttctca
gcacgcaacatcatacttggttattttgactatgctttcacggcaatctttactgttgag
atcctgttgaagatgacagcgtttggggctttcctccataaaggagccttctgcaggaac
tacttcaacctgctggacctactggtggtgggagtctctctggtgtcctttggcattcag
tcatccgccatctctgtggtgaagatcctgcgtgtgctgagggtgctgcggcccctgagg
gccatcaacagagccaagggcctcaagcatgtggtccagtgtgtatttgtggccatcagg
accattggtaatatcatgatcgtcaccacgctgctccagttcatgttcgcctgcatagga
gtgcagctcttcaagggcaagttctatcgctgcaccgacgaggccaagtccagcccggag
gaatgcaaaggcacatacattctgtataaggatggcgacacagtgttgcctgcggtcagg
gagaggatctggtacaacagtgacttcaactttgacaacgtcctcatggctatgatggct
ctgttcaccgtctctacatttgaaggctggcctgctctgctgtacaaggccatcgactcc
aacagagagaatatgggtcccatctacaactaccgtgtggagatctccatcttcttcatc
atctacatcatcatcatcgccttcttcatgatgaacatctttgtcggtttcgtcatcgtc
accttccaggagcagggagagaaagagtacaagaactgtgagctggacaaaaaccagcgt
cagtgtgtagagtatgctctgaaggctcgtccactgcggaggtacatccctaagaacccc
taccagtataagttctggtatgtggttaactccactggctttgagtacgtcatgttcgtt
ctcatcatcctcaacacactgtgtttggcgatccagcactatggccagtcccacctgttc
aactacgccatggacgtcctcaacatggtcttcactggcgtcttcaccgtggagatgatc
ctcaaactgattgccttcagacccagggggtattttggagacgcctggaacgtcttcgat
gccctggtggtgatcggcagcgtagtcgacatcattctcagtcagaacacagaggacagc
gctcgcatctccatcacattcttccgcttgttccgagtcatgcgattggtcaagctgctc
agcagaggggagggcatccgaacgctcctgtggaccttcatcaagtccttccaggctctt
ccctatgttgccctcctgatagccatgctattcttcatctacgctgttatcggcatgcag
gtgtttggaaagatcgccatggtagacggcacacagataaaccacaacaacaacttccag
acctttcctcaagctgtcctgatgctcttcaggtgtgctacaggcgaggtgtggcaggag
atcatgctggcatgtctgccagggaagctgtgtgactccgagtcagactacaaccccgga
gaggagagaacctgtggaagcggattcgccatcatctacttcatcagcttctacatgctc
tgtgccttcctgatcatcaacctgttcgtggctgtcatcatggataactttgactatctg
acacgggattggtccattttgggtcctcaccacctggatgagtttaaaaggatctggtct
gagtacgaccctgaggctaagggcaggataaagcatctggatgtggttaccttgctgaga
cgcatccagcctcctctaggcttcggcaagctgtgtccacacagagtggcctgcaagaga
ttggttgccatgaacatgcccctgaacagtgatggcacggtcatgtttaacgccaccctg
tttgccttggtgaggaccgctctgaagatcaagaccgaaggcaacctggagcaggccaat
gaggagttgcgagcggtcatcaagaagatctggaagaggaccagcatgaagctgctggac
caagtggtgccccctgctggcgatgacgaggtaaccgtggggaagttctatgctaccttc
ctgatacaggactacttcaggaaattcaagaaacgcaaagagcaaggcctggtgggaaga
aactcattcaccagcctgaactccaccatcgccctccaggccggtctccgcacactgcat
gatattgggcctgaaatccgccgagtcatatcatgtgacctgcaagacgagggccttgtc
gacattaacgcagaagacggcgaggagatttacaggaggaacggcgtgatcttctccaac
cacaccaatcacgttaacggggaccaccggggttccgcccaccagacaaatgtcactcaa
cggcccctccaggtccctccgccttcctgccacgcctccgtggagccctcccaggtcggc
tctgaggagagggcaggcgaaccccactggtacaactactactaccccaaatccccaata
tcctcaaacgccaaccttaacaatgccaacgtgcaccctgttccctccctgacaaacggg
gggcagcgccactgtcttcgccgtgagcactcgtccgccaatggggcaccctcttccagc
tcgcaccgcaagattgttgacttcgacacccacaccacggtccaatctgcaaggtcagat
tcagggggtgttcgttaccctaccgttcgtagagaggagccagggagggcagacagtgat
gaagacaggggctctggggaatacttcagcggggaagagtaccaggaggatgatatcatg
ttgcacaaagacaggatgtcccgtaaggagtgtcaagaccatcaaccggacagtctctgt
gatgaccaccagcaacccatttaccaggatggtgggcggtcgccgaagcgatggtttctc
ccctctacaccccatgccctccacagaccctcattcaactttcattgtctgcggaaacaa
agcagtcaaggcgatgacacccccttgaccccttccgttccccttcgaacagctctaccc
ctgcatctgctgcagcagcaggtgatggcggtggctggcctggactccagcagagtcccg
cgtcactctccgtcacgttctctacgctcctgggccacgccccccgtctcccccagcagc
agggaccactcccattactacacacccttgatccaggtggactggcgtgggttgagcagt
gtgagtagcacccctggctctgtgcgaaggagcacctggtacactgacgccccagaagcc
cccctaagccgtacttactcccccttacagctccagatcccaccagaatatcgcaggcag
taccaccagaacagaggcagtgctaacagcctagtggaggctgtgttgatttcagaagga
ctggggaaatacgccaaggaccccaagtttgtgtcggcgaccaagcacgagatcgcggac
gcctgcgagatgaccatcgacgagatggagagtgccgccagcaacctgctgaacggcagt
atgggtaatggggcgggggcaacggacacagtgactggcacgagcctcatggaccgcaat
ctcgaggactacagcgatgaggagccggacatgtgcgggaaatacgaggaggatctgact
gatgagttgatatgcatcagcaccctatag
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integrated database retrieval system
