Oncorhynchus masou masou (cherry salmon): 135504599
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Entry
135504599 CDS
T10723
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135504599
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135504599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135504599
Spliceosome [BR:
omm03041
]
Common components
Common spliceosomal components
SR proteins
135504599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
DbpA
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
135504599
NCBI-ProteinID:
XP_064779390
LinkDB
All DBs
Position
18:complement(40730381..40734239)
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AA seq
335 aa
AA seq
DB search
MPRVYVGKLSYHAREKDLQRFFNGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVTVEHARGPRRDRDGYSGGGGGRSSSGYSSSRSRTGRDKYGPPVRTEYRLIVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFGSRSDMRRALDKLDGTDINGRKIRL
VEEKSRRRRSYSGSRSRSRSRRRSRSRSSRSRSNSRSRSHSRSKRRRSRSGRKSRSCKSR
SRSRTRKSRSRSDKSKSRSKSRSKVKSERDSSSPSKEKLTSNKSRSCSASPMGNGKEEPS
SRSPSPAADRHSKSPDKRPVSRSPSRSRSRSASRD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgtctatgttggaaaactaagttatcatgctcgagaaaaagaccttcaacgg
tttttcaatggctacggaaagcttatggaaattgatctgaaaaatggatatggatttgta
gagtttgaggacaatcgcgatgcggatgatgctgtgtatgaactgaatggcaaggagttg
tgcggggagcgtgtgaccgtggaacatgcaagaggaccgcggcgcgaccgagatggatat
agtggtggcggtggtggtcgcagtagtagtggttacagcagcagcagaagccgcactggc
agggataagtacgggccacctgtccgtaccgagtaccgactgatcgttgagaatctgtcc
agccgctgcagctggcaggatctgaaggatttcatgcgccaggctggagaggtcacgtac
gctgacgcccacaaggagcgtaccaacgagggtgtcatcgagttcggctcacgttcggac
atgaggagggccctggacaagctggacggcacagacatcaacgggaggaagatccgcctg
gtggaggaaaagtctcgtcgccgccgctcctactctggcagccgctccaggtctcgcagc
agacgtcgctctcgtagcaggagcagccgctccaggagtaactccaggtcccgatcccat
tctcgcagcaagagacgtcgctctagatctggaaggaagtcccgttcctgcaagtctcgt
tcccgctctcgcacccgcaaatccagatcccgctccgacaaaagcaagtcccgttccaag
agccgttccaaggtgaaatccgagcgggattccagcagtccttccaaggagaagttgacc
agcaacaagtcacgtagctgctcggcgtcccctatggggaatgggaaggaggagccgtcc
tctcgctccccgtccccagcagctgaccgccactccaagtctccagacaagcgccctgtc
tcccgctccccatctcgctccaggtctagatcagcttcccgagattaa
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