Oncorhynchus masou masou (cherry salmon): 135504641
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Entry
135504641 CDS
T10723
Name
(RefSeq) calcium-responsive transactivator-like isoform X1
KO
K15623
protein SSXT
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135504641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135504641
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135504641
GBAF(ncBAF) complex
135504641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
135504641
NCBI-ProteinID:
XP_064779454
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Position
18:42772672..42792674
Genome browser
AA seq
471 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTPNTGSIGAGGMGQSGGSGPLHSQSNLNDTMTPGLPPTSML
QSQMSNGPSHAPMQQQAGQTQSAGPSSTSLSLPASTHGSASGYSHPVPPSSQGSMIQGLG
PGYGSSSSSSTSSRSNINMQSNTVSMMHQQSATPHYPSTQTGGGQQQYQGQQAAMGMLGQ
SGQGNNMMSQRPMGTYRPTQQGSAPQYMGQDDFYGEQYGHTQSSSEPINQQYYSDGHGEY
SYQQSSYGEQGYERSFDESSQHYYEGGNSQYSQQQAQYQQGSGQQQPFSQQQYPSQQGYS
GQPQGYGPGQGAQSQYSQYQQGQGQQYSSYRSQASSGAQTQRPYAYEQVQLQLPPTPRFE
EDRAVQQNIGVNTETTSNKAPPPGQTGGQVRQGNSSVNNPQQSCVNQSLSK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcattttcatcggcgcgcccaaggagcaaaggggaggtgacacagcaaacg
atacaaaagatgctggatgaaaatcaccatctgatacaatgcataatggattaccagagc
aaaggaaaaacagcagaatgcacacagtatcagcagatccttcacagaaacctagtctat
ctggccacgatagcagattctaatcagaacatgcagtcattgttacctgcacctcctacc
cctaacacggggagtataggtgctggaggaatgggacagagcggaggcagcgggccccta
cactcccagagtaacctcaacgacaccatgacccctggcctgccccctacctctatgttg
cagagtcagatgagcaatggccccagccacgctcccatgcagcagcaggcgggtcagaca
cagtcggctgggccctcatccacgtccctcagcctgccagccagcacccacggctcagcc
tccggctacagccaccccgtgcccccctcctcccagggcagcatgatccagggccttggc
ccaggctacggttcttcctcttcctcttctacctcctcccgcagcaacatcaacatgcag
tctaacacagtctccatgatgcaccagcagtcggctacacctcattacccctcaacccag
actggtggcggacagcagcagtaccagggtcagcaggctgctatgggcatgttggggcag
agcggacaaggcaacaacatgatgagccagaggcccatggggacctaccgacccacacag
caaggatctgcaccgcagtacatgggacaagacgatttctacggagagcagtacggacac
actcagagctccagcgagcccataaaccagcagtattactctgatggtcatggggagtac
tcctaccaacaatcatcctacggtgaacagggctatgagaggtcctttgatgagtcctca
cagcactactacgaaggaggcaactcccagtacagtcagcagcaggcccagtaccagcag
gggtcaggccagcagcagcccttcagccaacaacagtacccctcacagcagggctacagc
ggacagccacagggctacggtccaggtcagggtgcgcagtcccagtactcccagtaccag
cagggtcagggccagcagtacagctcctaccgctcccaggcttcctctggggcacagaca
cagaggccctacgcctacgaacaggtacaactacagctacccccaaccccacgttttgag
gaggaccgtgctgtccaacaaaacattggggtcaatacggaaactaccagcaataaggca
ccacctcctgggcaaactggtggacaagttaggcaagggaacagttctgtgaataacccc
caacagtcgtgtgtaaaccagtctctgagtaaatga
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