Oncorhynchus masou masou (cherry salmon): 135504873
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Entry
135504873 CDS
T10723
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135504873 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135504873 (lrrc4bb)
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
NGL family
135504873 (lrrc4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
DUF7617
Ig_6
Motif
Other DBs
NCBI-GeneID:
135504873
NCBI-ProteinID:
XP_064779856
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Position
18:complement(55905809..55919664)
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AA seq
752 aa
AA seq
DB search
MRVVMVTSPSTPSPLLWLVQILLWLHYHGPQVTEAAPPCPNPCSCSNQASRVICTRKSLV
EVPDSISVNTRYLNLQENTIEVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLDYI
SEAAFEGLFNLRFLNLGMCGLKEIPNLTPLVRLEELELSGNQLGNVRPGSFQGLVSLRKL
WLMHSKVTVIERNAFDDLKNLEELNLSHNTLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSTSDSSNPFSYFTTVTVETVETNNGEDSAARQYINETYVPPDYLG
PTVSGGVLGKGRAGFTISPSRSSLSSLSPRATRATEKAVTVSIMEVTNIPGLDDVMKTTK
IIIGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPTRAIEIINVEDEMGAGAGSGISGGS
TMQSGCGGDGTLRMHHPEIVNLPNIGRSEHLNHYYKANHFNNNVMGLSIGTGAGISTLSN
KNNPSPLNQQGQDIPISCTQVPISSATFQTMSGNGANTNPLSVSPPLPMSLPMSPMGLHG
SIKGFMGQNQNPQMEPLLFKGNSKENVQETQI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctccaccccttcccccctcctctggttggtccag
attttactgtggctccactaccatggacctcaggtaacagaagccgctcccccatgtcca
aacccatgtagctgctccaatcaggcaagccgagtgatctgtacaaggaagagtttggta
gaagtcccggacagtatttctgtgaacacaagataccttaacctacaagagaacacgatt
gaggtgataaagtctgacacattcaagcacctgcggcatttggaaatcctgcagctttcc
aagaaccacatcagacaaatcgaggtgggcgcgttcaatggcctacccaacctcaacacc
ctggagctctttgacaaccgccttacgctggtaccgtcgcaggcctttgagtacctcagc
aagctgcgggagctctggctacggaacaaccccatcgagacactgccggcgtacgctttc
caccgcgttccctccctgcgccgtctcgacctgggcgaactacggaagttggactacatc
tctgaggctgccttcgagggcctgttcaacttgcgtttcctgaacctgggcatgtgcggt
ctgaaggaaatacccaacctcacacccttggtccgactggaggagctagagctgtctggc
aaccagctgggtaatgtccggcccggctcgttccaaggcctggtgtcgctgcgcaaactg
tggctcatgcactctaaggtgacggtcattgagcgcaatgccttcgacgacctgaagaac
ctggaggaactcaacctgtcccacaacaccttgcactcgctgccccacgacctcttcacc
ccgctgcaccagttggagcgggtgcacctcaaccacaacccctgggtgtgcaactgcgat
gtcctgtggcttagctggtggctgaaggagacggtgcccagtaacaccacatgctgtgcc
cgctgccatgcgccaccaggcctgaagggccggtacattggtgagctggaccagagccac
ttcacatgctacgctcctgtcattgtagagccacccactgacctcaatgtcacagagggc
atggctgctgagctgaagtgtcgcactggcacctccatgacgtctgtcaactggctcacc
ccaaatggcaccctcatgacgcatggctcgtaccgcgtcaggatctcagtccttcacgat
ggaacactgaatttcaccaatgtgactgtgcaggacacgggccaatacacctgcatggtg
accaactccgccggcaacactacggcaaccgcagtgctcaacgtgtctacctcagactcc
agcaaccctttcagctacttcaccaccgtcactgtggaaaccgtggaaactaacaatggg
gaggattctgctgcaaggcagtacatcaacgaaacctacgtaccgccagattacctgggt
cccactgtttcaggaggggtactgggtaaaggcagggctggattcaccatatctccatct
cgctcatctctctcctctctatccccgcgagccaccagagccactgaaaaggcagtcaca
gtgtcgataatggaggtcacgaacatccctggcctggacgacgtgatgaagaccaccaag
atcatcattggctgcttcgtggccatcaccttcatggcggccgtgatgctggtggtcttc
tacaagctgaggaagcagcaccagctgcacaagcaccatggccccacccgcgccatcgag
atcatcaacgtggaggatgagatgggtgccggggccgggagcggcatctcagggggatcg
accatgcaatccgggtgcggaggagacggaaccttgaggatgcatcacccggaaatagtc
aaccttcccaacatcgggcgatcagagcatcttaaccattactacaaggccaatcatttc
aacaacaacgtgatgggtctgagcattgggacaggggcaggcatcagtactctaagcaac
aagaacaacccgtccccactgaaccagcaaggccaggatatccccatctcctgtacacag
gttccaatctcctcagccactttccagaccatgtccggaaatggcgccaacaccaaccct
ctttccgtttccccacctctgccgatgtccctccccatgtcccccatgggattacacgga
tcgatcaagggtttcatgggccagaaccagaatccacaaatggagcctcttttgttcaag
ggaaactcaaaggaaaacgttcaagagactcaaatctga
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