Oncorhynchus masou masou (cherry salmon): 135504934
Help
Entry
135504934 CDS
T10723
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135504934 (rnf40)
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135504934 (rnf40)
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
135504934 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
CC_Bre1
BRE1
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
Ice_binding
Motif
Other DBs
NCBI-GeneID:
135504934
NCBI-ProteinID:
XP_064779946
LinkDB
All DBs
Position
18:57829256..57841483
Genome browser
AA seq
971 aa
AA seq
DB search
MSGTGGGKRASGGDSSPGPPEKKCKKEEKTTTTLIEPIRIGGVSSTEEMDMKVIQFKNKK
LSERLEQRQTMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEENVHVLRQRIDPTVVP
APPATPVSTPTPMDSDGMMIPPPPPPSAPLPVPEHEEKQPPPPDGMEIAREPQQDSTTAP
PPTTTLSESTKAFLSTLDNSSEEELSLQLRDRMQFSKEAAACMVCVFDRLHSRIDGLCTQ
ILSSACEDDSQEEMLRLNRTLLEENGRLQDLASSLQGRHHKMSMEYNELVDKVTSSETKV
SEMETAVEDLQWDIEKLRKREQKLNKHLAEALEQLTSGYYTTGSSGGLPGGQITLNIQKF
ESLNAELEQNQELANNRMADLEKLQQELQEAVRESEKLKLDLKNIPEDVVKETADYKCLQ
SQFSLLYNESLGVKTQLDEARALLLTAKNAHLRQIEHMESDELSLQKKLRTEVIQLEDTL
AQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHNHQLKGDVQRYKRKLRETQ
MEINKLRCQSGDTGLLSLEEPVSDSLEVKKEEDEDQEEERRRELERQRARERERETERER
ERERERERQRSEELKRKDSDTLKMLRAELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLM
AAERKSKAEVDELRVRVRELEERERKESKKLADEDALRKIRVAEETIDHLQKKLTATKQE
EEALLSEMDVTGQAFEDMQEQNSRLMQQLREKDDANFKLMSERIKSNQIYKLLREEKEEL
ADQVLTFKTQVEAQLLVVQKLEEKEGILQSSLTNLEKELGVRIQALELNKRKAVEAAQLA
EDLKVQLDHTQSKLRKIQVSVSENRNARERELGNLKRAQEDLSRLRRKLEKQKKVEVYTD
ADEILQEEINQYKAKLRCPCCNTRDKETVLTKCFHVFCYECLKTRYDTRQRKCPKCNCAF
GANDFHRIYIT
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaccgggggagggaagcgagcctcaggtggggacagctcccctggtccacct
gagaagaagtgtaaaaaagaggaaaagaccaccaccactctcattgagcccatacgcatt
gggggagtgtcctctacggaggagatggacatgaaggtgatccagtttaagaacaaaaag
ctgagtgagcgtctggagcagaggcagactatggaggatgagctgcgggagaagatcgag
aagctggaaaagcgacaagctactgacgataccacactgctcattgtgaatcgctactgg
tcccagttggaagaaaatgttcacgtcctgcgccaacgcattgaccccacggtggtcccg
gcaccccccgctactcctgtttctacccctaccccgatggattcggatggcatgatgatc
ccaccaccaccccctccctcagccccactcccagtgccagaacacgaggagaaacagcct
ccaccacccgacggtatggagatagctcgtgaaccacaacaggactcgacaaccgcccct
ccgcccactactaccctcagtgagagtaccaaagccttcctctccactttggacaacagc
agtgaggaggagctcagcctgcagctgcgggacaggatgcagttcagcaaggaggccgct
gcctgcatggtctgcgtcttcgacaggctgcacagccgcatcgacggcctatgcacccag
atcctgtcctcggcgtgtgaggatgacagccaggaagagatgctccgtctgaatcgtact
ctgctcgaggagaatggcagactgcaagacctggcctcctccctgcagggcagacaccac
aagatgtctatggagtacaacgagcttgtggataaggtgacaagctcggagaccaaggtt
tctgagatggagactgctgtggaggatctacagtgggacatcgagaagctccgtaagagg
gaacagaagctcaacaagcatctggctgaggcattggagcagttgacctcgggctactac
accactggcagctcaggggggctacccgggggccagatcaccctcaatatacagaagttt
gagagcctgaatgcagagttggagcagaaccaggagctggccaacaaccgcatggcagat
ttggagaaactacagcaggagctccaggaggctgtcagggagagcgagaaactcaagttg
gacctgaaaaatattccagaggatgtggtgaaagagaccgcggactacaagtgcctgcag
tcccaattctccctgctctacaacgagtctttgggggtgaagacccagctggatgaggcc
cgggccctgctcctcaccgcaaagaacgcccacctccgacagatagagcacatggagagt
gacgagctgtccctacagaagaagctccgcacagaggtcatccagctggaagacacgctg
gcccaggtgcgcaaggagtacgagatgctgcgcatcgagtttgagcagaacctggcggcc
aacgagcaagcaggcccaatcaacagagagatgcgccacctcatcagcagcctccagaac
cacaaccaccagctgaaaggtgacgtgcagcgttacaagcggaagctccgagaaacacag
atggagatcaacaagttgcggtgtcagagtggtgacactgggcttctgtcattggaggag
ccggtgagcgacagcctggaggtgaagaaagaggaggatgaagaccaagaggaggagagg
aggagggagctggagagacagcgggcccgggagagggagagggagactgagagggaacga
gagagggagcgagaaagagagcgacagcgcagcgaggagttgaagaggaaagattcggac
accctgaagatgctgagggcggaacttaagaaagcccaggagtctcagaaggagatgaaa
ctacttttggacatgtacaaatcagctcccaaagagcagagggacaaagtgcagcttatg
gcagcagagcgcaagtctaaagccgaggtggatgagttgcgggtgcgtgtccgagagctg
gaggagagggagaggaaggagagcaagaagctggctgatgaggatgctctcaggaagatc
cgtgtggcagaggagacaatcgaccatctacagaagaagctcactgccaccaaacaagag
gaggaggccctactgagtgagatggacgtgacgggccaggcctttgaggacatgcaggag
cagaacagccggctgatgcagcagctgagggagaaggacgacgccaacttcaagctgatg
tcggaacgcatcaagtccaaccagatctacaagctgctgagggaggagaaggaggagctg
gctgaccaggtgctcaccttcaagacccaggtggaagcccagttattggttgtacagaag
ctggaggagaaagagggcatcctccagagctcactgaccaatctggagaaagagttagga
gttcgcatacaagcactagaactcaacaagaggaaggcggtggaggcagcccagctggct
gaggaccttaaggtgcagctggatcacacccagtccaagctgaggaagatccaggtatct
gtgtctgagaaccgcaacgccagagagcgggagttgggcaacctcaaaagagcgcaggag
gacctgtccaggctacgacgaaagctggagaagcagaagaaagtggaggtgtacactgat
gctgatgagatcctgcaggaggagatcaaccagtataaggcgaagctgcgttgtccgtgc
tgcaacacccgcgacaaggagacggtgctcaccaagtgtttccacgttttctgctacgag
tgtctgaagacgcgctacgacacccgacaaaggaagtgccccaagtgcaactgtgccttc
ggggccaacgacttccaccgcatctacatcacctaa
DBGET
integrated database retrieval system
