KEGG   Oncorhynchus masou masou (cherry salmon): 135505089
Entry
135505089         CDS       T10723                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:omm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:omm03036]
    135505089
   03400 DNA repair and recombination proteins [BR:omm03400]
    135505089
Chromosome and associated proteins [BR:omm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    135505089
DNA repair and recombination proteins [BR:omm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     135505089
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N Adaptin_N Sec7-like_HUS
Other DBs
NCBI-GeneID: 135505089
NCBI-ProteinID: XP_064780236
LinkDB
Position
18:63370595..63388745
AA seq 1025 aa
MAAGSALLVGLVEEFVSGQQDSKAADTATGLKAGQFTILQLVEALGLHLASSQPQTRARG
VQLLSNVLQQCHGDLTEREVDVLLAFYENRLKDHYVITPHVLKGMEALTKCSVLPPGSAV
SILKSLFQDVHVQSLMLVERSCVYNILTQLMESRESELKGLGADFVFGFVQSVDGERDPR
NLLLAFQIARKIIHGGYDLGKFTEELFEVTSCYFPIDFSPPPNDPHGITQEELILALRAV
LTGTPRFAEFLLPLIIEKLDSDVQSAKVDSLQTLTACASVYEHKELAEFLPGLWASLRRE
VFQTASERVESAGLAALGALTACISRSVLNSDSEDYLDVFLDLVLKDCQHHLCEPDLKLV
WPSAKLLQATSTASYRASHRVAAAIMPSLIEQYNSRTQCAQRRTLLEVLQGFVQPAKSSE
DESVLLDFRQSLCSIVFSALSENSAGLQITSLRVLTALSQQTVLLLESDVELAVDHLTRL
ILEEEDAKVSLAVVECAGALAGLHPLAFISKLVPRLKGEIFSESMAQGDCATPSQEHSQQ
AVRQRCLTALAAVSSRPSVVQESTPVLLQVLTSSHTGTGLFSLEEVISVCHNLQRIAEHA
QDTEETGHVFHDIIIPRLLGLALQAAMRGSSDHPSPLVEESVLSAMVPVISTTCARLQSQ
LAGQTATRAVSLFLDGDMSFLPENAFPSQIQLLKKQAGDSWSQSQMVCLLMGCVCSLPRS
VEVPQIDRLLLELEELSCTCGHPFSYTSAAKCYAGLVNKRPAGEALDSLIDGTLKRISTE
LDCASSSVRTQAFTLLLWVAKALLLRYHPLSTALTDKLFSLLSDSELGSLAADGFSLLMS
DSPDVLNRGCNADVRIMYRQRFFTENSAKLVQGFNSAAQEKKSGYLKALSHIVNYLPRQV
QLTELPALLPLLLEALSCPDQAVQLSTLSCLQPVLMDPPSALITQLEALVGRTLTLTTSP
AMKVRIASLRCIHALSRFPEHEIMPFRARVLRALAVPLDDLKRMVRSEAVVARNEWFLLG
SPGGR
NT seq 3078 nt   +upstreamnt  +downstreamnt
atggctgcgggtagtgccttgctagtgggcttggtagaagaatttgtttcgggacaacag
gacagcaaggccgcagacaccgcaacaggactcaaggctggacagtttacaatactacag
ttggttgaagcgttgggcttgcatctggccagctctcagccccagacccgagcccgtggt
gtccagctcctctccaatgtcctgcagcagtgccatggagacctcacagagagagaagtg
gacgtccttctagcgttttatgagaacagactcaaggaccactatgtcatcacaccacat
gtcttaaaggggatggaagcgctgacgaaatgctcagtgttgccgcctgggtctgcggtg
tccattctgaaatcactcttccaggacgttcatgtgcagtccctgatgctggtggagcgg
tcatgtgtttacaacatccttacccagcttatggaatccagggagtcagagctgaagggc
ctgggtgcagactttgtctttgggtttgtccagtcagtggatggggagagggacccacgc
aatcttctcctggccttccagatcgctaggaaaatcatccatggaggctatgatctgggt
aaattcacagaggagctgtttgaagttacatcctgctatttccccatagacttcagcccg
ccacccaatgacccccacggcatcacccaggaagagctgatcctcgccctgagggccgtg
ctcactggaacaccacgctttgcagagttcctgctgccgctgatcattgagaagctggac
tcagatgttcagagtgccaaggtggactccctgcagactctgactgcctgtgcttctgtg
tatgaacataaagagctagccgaattcctaccaggcctttgggcctcgctgcgcagggag
gtgttccagacagccagtgagagggtggagtccgctggtctagctgccctcggtgccctg
acagcctgcatctcccgctccgtcctcaactctgactctgaggactacctcgatgtcttc
ctcgacttggtcctcaaagactgtcagcaccacctgtgtgagccggacctgaagctggtg
tggcccagcgccaagctgctgcaggccacctctaccgcctcctacagggcgagccacaga
gttgcagccgccatcatgccgtccctcatagaacaatacaacagccgaacacaatgtgct
cagcggcgcaccctactggaggtgttacagggcttcgtccagccagcgaagtcttcagag
gatgagagtgtgctgttggacttcaggcagtctctttgcagtatagtgttctctgctctg
tctgagaacagtgctgggctccagatcacatcactgcgtgtgctcactgccctgagccaa
cagacagtcctactattagagtcagatgtggagctggctgttgaccacctcaccaggctc
atcctggaggaggaagatgctaaagtcagcctggctgtggttgagtgtgcaggggctctg
gctggtctgcatcctctagccttcatctctaagttggttccacggctgaagggggagatc
ttctcagaatccatggcacaaggtgactgcgccacgccgtcccaggaacattcccagcag
gccgtgcgtcagcggtgtttgacggcgctggctgcggtgtcgtcccggcccagtgtggtt
caggagagcacacctgtcctgctacaggttctcacctcctcacacactggcactggctta
ttttcattggaggaggtcatctctgtgtgccacaatctgcaaaggatagcagagcatgcc
caggacactgaagagaccggccatgtcttccatgacatcatcattccgcgcctgctcgga
ctggccttgcaggcagctatgcgggggtcctcagaccatccgagtcctttagtggaggag
tctgtcctatcagccatggtaccagtcatcagcaccacctgtgcccgactacagtcccaa
ctggcaggccaaacagccacgcgggcggtgtccctcttcctggatggtgacatgtccttc
ctgccagagaatgccttcccctcccagatccagctcctgaagaagcaggcaggtgactcc
tggagccagtcccagatggtgtgtcttctcatgggttgtgtgtgctcactgccacggagt
gtggaggttccacagattgacaggctactgttagaactggaggagctgagctgtacctgt
ggccatcccttctcctacacctcagctgccaagtgctacgctgggctggtcaacaagcgg
cctgcaggagaagccctggactctctgatagacgggacgttaaagaggatctccactgag
ctggactgtgcgtcctcctcggtccgaacgcaggcgttcacgctgctgctctgggtggcc
aaggctctccttctccgctaccaccctctgtccacagccctgactgacaagcttttctcc
ctgctcagtgactcagaactgggttcgttagctgccgatggattctctctcttgatgagc
gactcgccggacgtcctcaatcgcggttgcaatgccgacgtacgcatcatgtaccgccag
cgcttcttcaccgagaactcggccaagcttgtccagggctttaactctgcagcccaagag
aagaagtctggctacctgaaggcactgtctcacatagtgaactacctacccagacaggtt
cagctcactgagctaccagcactcctgcccctcctgctagaggccctgtcctgtccagac
caggcggtgcagctgtccaccctgtcctgcctgcaacctgtcctcatggaccccccctcc
gccctcatcactcagctggaggcgctagtaggccgcaccctcaccctcaccacaagccct
gctatgaaagtgcggatagcctctctgcgctgtatccatgccctctcccgctttccagaa
catgagatcatgcctttccgtgcgagggtgctgcgtgccctggctgtgcccctggatgac
ctcaagaggatggtgaggagtgaggcggtggtggcacgcaatgaatggttcctactgggg
agtccagggggaaggtga

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